RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 A0A1B0GVL5 298 aa4□□□□□ -1.77
BRCA1-204ENST00000412061 MTMR11A4FU01 709 aa4□□□□□ -1.77
BRCA1-204ENST00000412061 SNTNA6NMZ2 147 aa4□□□□□ -1.77
BRCA1-204ENST00000412061 H3BMH7 237 aa4□□□□□ -1.77
BRCA1-204ENST00000412061 NDUFS8O00217 210 aa4□□□□□ -1.77
BRCA1-204ENST00000412061 SH2D1BO14796 132 aa4□□□□□ -1.77
BRCA1-204ENST00000412061 B4GAT1O43505 415 aa4□□□□□ -1.77
BRCA1-204ENST00000412061 TIMM8AO60220 97 aaPredicted RBP4□□□□□ -1.77
BRCA1-204ENST00000412061 LGI1O95970 557 aa4□□□□□ -1.77
BRCA1-204ENST00000412061 KRT14P02533 472 aa4□□□□□ -1.77
BRCA1-204ENST00000412061 ATP1B1P05026 303 aa4□□□□□ -1.77
BRCA1-204ENST00000412061 CCDC172P0C7W6 258 aa4□□□□□ -1.77
BRCA1-204ENST00000412061 FOSL2P15408 326 aa4□□□□□ -1.77
BRCA1-204ENST00000412061 GCFC2P16383 781 aaKnown RBP4□□□□□ -1.77
BRCA1-204ENST00000412061 ZNF23P17027 643 aa4□□□□□ -1.77
BRCA1-204ENST00000412061 CA4P22748 312 aa4□□□□□ -1.77
BRCA1-204ENST00000412061 LAP3P28838 519 aa4□□□□□ -1.77
BRCA1-204ENST00000412061 HSD17B2P37059 387 aa4□□□□□ -1.77
BRCA1-204ENST00000412061 CDH4P55283 916 aa4□□□□□ -1.77
BRCA1-204ENST00000412061 DSCR9P59020 149 aa4□□□□□ -1.77
BRCA1-204ENST00000412061 RPS4XP62701 263 aaKnown RBP4□□□□□ -1.77
BRCA1-204ENST00000412061 LIPEQ05469 1076 aa4□□□□□ -1.77
BRCA1-204ENST00000412061 CNTN1Q12860 1018 aa4□□□□□ -1.77
BRCA1-204ENST00000412061 DRP2Q13474 957 aa4□□□□□ -1.77
BRCA1-204ENST00000412061 CDKN3Q16667 212 aa4□□□□□ -1.77
BRCA1-204ENST00000412061 ACSF3Q4G176 576 aaPredicted RBP4□□□□□ -1.77
BRCA1-204ENST00000412061 CTSL3PQ5NE16 218 aa4□□□□□ -1.77
BRCA1-204ENST00000412061 KCNIP4Q6PIL6 250 aa4□□□□□ -1.77
BRCA1-204ENST00000412061 KIAA1328Q86T90 577 aa4□□□□□ -1.77
BRCA1-204ENST00000412061 LUZP2Q86TE4 346 aa4□□□□□ -1.77
BRCA1-204ENST00000412061 ELMOD1Q8N336 334 aa4□□□□□ -1.77
BRCA1-204ENST00000412061 RELL2Q8NC24 303 aaPredicted RBP4□□□□□ -1.77
BRCA1-204ENST00000412061 BBS1Q8NFJ9 593 aa4□□□□□ -1.77
BRCA1-204ENST00000412061 OR5AU1Q8NGC0 362 aa4□□□□□ -1.77
BRCA1-204ENST00000412061 OR9A1PQ8NGU1 263 aa4□□□□□ -1.77
BRCA1-204ENST00000412061 KIAA1143Q96AT1 154 aaPredicted RBP4□□□□□ -1.77
BRCA1-204ENST00000412061 C19orf60Q96EN9 201 aa4□□□□□ -1.77
BRCA1-204ENST00000412061 PCED1BQ96HM7 432 aa4□□□□□ -1.77
BRCA1-204ENST00000412061 C4orf45Q96LM5 186 aa4□□□□□ -1.77
BRCA1-204ENST00000412061 C10orf90Q96M02 699 aa4□□□□□ -1.77
BRCA1-204ENST00000412061 TGM7Q96PF1 710 aa4□□□□□ -1.77
BRCA1-204ENST00000412061 STRADBQ9C0K7 418 aa4□□□□□ -1.77
BRCA1-204ENST00000412061 SLC7A5P2Q9GIP4 190 aa4□□□□□ -1.77
BRCA1-204ENST00000412061 CXXC4Q9H2H0 198 aa4□□□□□ -1.77
BRCA1-204ENST00000412061 TMEM185BQ9H7F4 350 aa4□□□□□ -1.77
BRCA1-204ENST00000412061 APOBEC3GQ9HC16 384 aaKnown RBP4□□□□□ -1.77
BRCA1-204ENST00000412061 UFSP2Q9NUQ7 469 aa4□□□□□ -1.77
BRCA1-204ENST00000412061 FAM120CQ9NX05 1096 aaKnown RBP4□□□□□ -1.77
BRCA1-204ENST00000412061 HACD3Q9P035 362 aa4□□□□□ -1.77
BRCA1-204ENST00000412061 GCNT4Q9P109 453 aa4□□□□□ -1.77
BRCA1-204ENST00000412061 POU2F3Q9UKI9 436 aa4□□□□□ -1.77
BRCA1-204ENST00000412061 POMT2Q9UKY4 750 aa4□□□□□ -1.77
BRCA1-204ENST00000412061 RPH3ALQ9UNE2 315 aa4□□□□□ -1.77
BRCA1-204ENST00000412061 GSTK1Q9Y2Q3 226 aa4□□□□□ -1.77
BRCA1-204ENST00000412061 KLF2Q9Y5W3 355 aaPredicted RBP4□□□□□ -1.77
BRCA1-204ENST00000412061 FKBP7Q9Y680 259 aa4□□□□□ -1.77
BRCA1-204ENST00000412061 CGNL1Q0VF96 1302 aa4□□□□□ -1.77
BRCA1-204ENST00000412061 LRRC30A6NM36 301 aa3.99□□□□□ -1.77
BRCA1-204ENST00000412061 P2RX6O15547 441 aa3.99□□□□□ -1.77
BRCA1-204ENST00000412061 SCGNO76038 276 aa3.99□□□□□ -1.77
BRCA1-204ENST00000412061 STAMBPO95630 424 aa3.99□□□□□ -1.77
BRCA1-204ENST00000412061 CSTAP01040 98 aa3.99□□□□□ -1.77
BRCA1-204ENST00000412061 UBTFL6P0CB48 400 aaPredicted RBP3.99□□□□□ -1.77
BRCA1-204ENST00000412061 HLA-DOBP13765 273 aa3.99□□□□□ -1.77
BRCA1-204ENST00000412061 GLRA1P23415 457 aa3.99□□□□□ -1.77
BRCA1-204ENST00000412061 CTNNA2P26232 953 aa3.99□□□□□ -1.77
BRCA1-204ENST00000412061 CD1BP29016 333 aa3.99□□□□□ -1.77
BRCA1-204ENST00000412061 RDXP35241 583 aaKnown RBP3.99□□□□□ -1.77
BRCA1-204ENST00000412061 FDFT1P37268 417 aa3.99□□□□□ -1.77
BRCA1-204ENST00000412061 CCT3P49368 545 aaKnown RBP3.99□□□□□ -1.77
BRCA1-204ENST00000412061 PDLIM4P50479 330 aa3.99□□□□□ -1.77
BRCA1-204ENST00000412061 DNA2P51530 1060 aa3.99□□□□□ -1.77
BRCA1-204ENST00000412061 TPMTP51580 245 aa3.99□□□□□ -1.77
BRCA1-204ENST00000412061 SGSHP51688 502 aa3.99□□□□□ -1.77
BRCA1-204ENST00000412061 PLA2G16P53816 162 aa3.99□□□□□ -1.77
BRCA1-204ENST00000412061 LGALS3BPQ08380 585 aa3.99□□□□□ -1.77
BRCA1-204ENST00000412061 MFGE8Q08431 387 aaPredicted RBP3.99□□□□□ -1.77
BRCA1-204ENST00000412061 KLF5Q13887 457 aaPredicted RBP3.99□□□□□ -1.77
BRCA1-204ENST00000412061 SYCP1Q15431 976 aa3.99□□□□□ -1.77
BRCA1-204ENST00000412061 KLHL40Q2TBA0 621 aa3.99□□□□□ -1.77
BRCA1-204ENST00000412061 ZNF699Q32M78 642 aa3.99□□□□□ -1.77
BRCA1-204ENST00000412061 ALKBH6Q3KRA9 238 aa3.99□□□□□ -1.77
BRCA1-204ENST00000412061 GGTA1PQ4G0N0 100 aa3.99□□□□□ -1.77
BRCA1-204ENST00000412061 IRAK1BP1Q5VVH5 260 aa3.99□□□□□ -1.77
BRCA1-204ENST00000412061 PLPP4Q5VZY2 271 aa3.99□□□□□ -1.77
BRCA1-204ENST00000412061 TCEAL6Q6IPX3 200 aa3.99□□□□□ -1.77
BRCA1-204ENST00000412061 DOK6Q6PKX4 331 aa3.99□□□□□ -1.77
BRCA1-204ENST00000412061 SLC24A5Q71RS6 500 aa3.99□□□□□ -1.77
BRCA1-204ENST00000412061 Q7L0L9 218 aa3.99□□□□□ -1.77
BRCA1-204ENST00000412061 ASRGL1Q7L266 308 aa3.99□□□□□ -1.77
BRCA1-204ENST00000412061 C17orf64Q86WR6 236 aa3.99□□□□□ -1.77
BRCA1-204ENST00000412061 MAB21L3Q8N8X9 362 aa3.99□□□□□ -1.77
BRCA1-204ENST00000412061 ZNF441Q8N8Z8 693 aa3.99□□□□□ -1.77
BRCA1-204ENST00000412061 NFAM1Q8NET5 270 aaPredicted RBP3.99□□□□□ -1.77
BRCA1-204ENST00000412061 LILRB4Q8NHJ6 448 aa3.99□□□□□ -1.77
BRCA1-204ENST00000412061 SCFD1Q8WVM8 642 aa3.99□□□□□ -1.77
BRCA1-204ENST00000412061 ZBTB9Q96C00 473 aa3.99□□□□□ -1.77
BRCA1-204ENST00000412061 HAVCR1Q96D42 359 aa3.99□□□□□ -1.77
BRCA1-204ENST00000412061 MED30Q96HR3 178 aa3.99□□□□□ -1.77
BRCA1-204ENST00000412061 LYZL4Q96KX0 146 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms