RNA–Protein interactions for RNA: ENST00000411938.1

LSM8-202, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 3

Gene LSM8, Length 290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-202ENST00000411938 CSHL1Q14406 222 aa6.39□□□□□ -1.39
LSM8-202ENST00000411938 RBBP5Q15291 538 aaKnown RBP6.39□□□□□ -1.39
LSM8-202ENST00000411938 ACKR1Q16570 336 aa6.39□□□□□ -1.39
LSM8-202ENST00000411938 FAM83EQ2M2I3 478 aa6.39□□□□□ -1.39
LSM8-202ENST00000411938 THEMIS2Q5TEJ8 643 aa6.39□□□□□ -1.39
LSM8-202ENST00000411938 ZNF425Q6IV72 752 aa6.39□□□□□ -1.39
LSM8-202ENST00000411938 FAM45BPQ6NSW5 357 aa6.39□□□□□ -1.39
LSM8-202ENST00000411938 NEPROQ6NW34 567 aa6.39□□□□□ -1.39
LSM8-202ENST00000411938 SUSD1Q6UWL2 747 aa6.39□□□□□ -1.39
LSM8-202ENST00000411938 ZCCHC10Q8TBK6 192 aa6.39□□□□□ -1.39
LSM8-202ENST00000411938 FAM45AQ8TCE6 357 aa6.39□□□□□ -1.39
LSM8-202ENST00000411938 SMPDL3AQ92484 453 aa6.39□□□□□ -1.39
LSM8-202ENST00000411938 ASB9Q96DX5 294 aa6.39□□□□□ -1.39
LSM8-202ENST00000411938 L3HYPDHQ96EM0 354 aa6.39□□□□□ -1.39
LSM8-202ENST00000411938 CDRT15Q96T59 188 aa6.39□□□□□ -1.39
LSM8-202ENST00000411938 MACROD1Q9BQ69 325 aa6.39□□□□□ -1.39
LSM8-202ENST00000411938 MRPS26Q9BYN8 205 aaKnown RBP6.39□□□□□ -1.39
LSM8-202ENST00000411938 GSX2Q9BZM3 304 aa6.39□□□□□ -1.39
LSM8-202ENST00000411938 ZNF696Q9H7X3 374 aa6.39□□□□□ -1.39
LSM8-202ENST00000411938 IL1RL2Q9HB29 575 aa6.39□□□□□ -1.39
LSM8-202ENST00000411938 ARNT2Q9HBZ2 717 aa6.39□□□□□ -1.39
LSM8-202ENST00000411938 ANKHQ9HCJ1 492 aa6.39□□□□□ -1.39
LSM8-202ENST00000411938 LANCL2Q9NS86 450 aa6.39□□□□□ -1.39
LSM8-202ENST00000411938 NLE1Q9NVX2 485 aaPredicted RBP6.39□□□□□ -1.39
LSM8-202ENST00000411938 HPF1Q9NWY4 346 aa6.39□□□□□ -1.39
LSM8-202ENST00000411938 NDUFA13Q9P0J0 144 aa6.39□□□□□ -1.39
LSM8-202ENST00000411938 TAC3Q9UHF0 121 aa6.39□□□□□ -1.39
LSM8-202ENST00000411938 PACSIN3Q9UKS6 424 aa6.39□□□□□ -1.39
LSM8-202ENST00000411938 VPS9D1Q9Y2B5 631 aa6.39□□□□□ -1.39
LSM8-202ENST00000411938 NPFFR2Q9Y5X5 522 aa6.39□□□□□ -1.39
LSM8-202ENST00000411938 AP4B1Q9Y6B7 739 aa6.39□□□□□ -1.39
LSM8-202ENST00000411938 ARHGAP21Q5T5U3 1957 aa6.38□□□□□ -1.39
LSM8-202ENST00000411938 ZNF860A6NHJ4 632 aa6.38□□□□□ -1.39
LSM8-202ENST00000411938 SAGE2PA6NJ88 616 aa6.38□□□□□ -1.39
LSM8-202ENST00000411938 RNF223E7ERA6 249 aa6.38□□□□□ -1.39
LSM8-202ENST00000411938 H0YJX3 145 aa6.38□□□□□ -1.39
LSM8-202ENST00000411938 ACOT8O14734 319 aa6.38□□□□□ -1.39
LSM8-202ENST00000411938 MRASO14807 208 aa6.38□□□□□ -1.39
LSM8-202ENST00000411938 HAT1O14929 419 aa6.38□□□□□ -1.39
LSM8-202ENST00000411938 UBDO15205 165 aa6.38□□□□□ -1.39
LSM8-202ENST00000411938 CFLARO15519 480 aa6.38□□□□□ -1.39
LSM8-202ENST00000411938 HCN1O60741 890 aa6.38□□□□□ -1.39
LSM8-202ENST00000411938 DNAJA2O60884 412 aa6.38□□□□□ -1.39
LSM8-202ENST00000411938 B4GALT2O60909 372 aa6.38□□□□□ -1.39
LSM8-202ENST00000411938 CCNDBP1O95273 360 aa6.38□□□□□ -1.39
LSM8-202ENST00000411938 TNFAIP8O95379 198 aa6.38□□□□□ -1.39
LSM8-202ENST00000411938 IL2RAP01589 272 aa6.38□□□□□ -1.39
LSM8-202ENST00000411938 FAM157CP0CG43 387 aa6.38□□□□□ -1.39
LSM8-202ENST00000411938 IL10P22301 178 aa6.38□□□□□ -1.39
LSM8-202ENST00000411938 GSTT1P30711 240 aa6.38□□□□□ -1.39
LSM8-202ENST00000411938 CEACAM8P31997 349 aaPredicted RBP6.38□□□□□ -1.39
LSM8-202ENST00000411938 ZNF136P52737 540 aa6.38□□□□□ -1.39
LSM8-202ENST00000411938 PGGT1BP53609 377 aa6.38□□□□□ -1.39
LSM8-202ENST00000411938 STX1BP61266 288 aa6.38□□□□□ -1.39
LSM8-202ENST00000411938 MEF2AQ02078 507 aaPredicted RBP6.38□□□□□ -1.39
LSM8-202ENST00000411938 PRDX1Q06830 199 aaKnown RBP6.38□□□□□ -1.39
LSM8-202ENST00000411938 HYAL2Q12891 473 aa6.38□□□□□ -1.39
LSM8-202ENST00000411938 TRAP1Q12931 704 aaKnown RBP6.38□□□□□ -1.39
LSM8-202ENST00000411938 STX5Q13190 355 aa6.38□□□□□ -1.39
LSM8-202ENST00000411938 PDAP1Q13442 181 aaKnown RBP6.38□□□□□ -1.39
LSM8-202ENST00000411938 ACAP2Q15057 778 aa6.38□□□□□ -1.39
LSM8-202ENST00000411938 HECTD2Q5U5R9 776 aa6.38□□□□□ -1.39
LSM8-202ENST00000411938 POMZP3Q6PJE2 187 aa6.38□□□□□ -1.39
LSM8-202ENST00000411938 IL20RBQ6UXL0 311 aa6.38□□□□□ -1.39
LSM8-202ENST00000411938 SPATA24Q86W54 205 aa6.38□□□□□ -1.39
LSM8-202ENST00000411938 CILP2Q8IUL8 1156 aa6.38□□□□□ -1.39
LSM8-202ENST00000411938 ARMC10Q8N2F6 343 aa6.38□□□□□ -1.39
LSM8-202ENST00000411938 LKAAEAR1Q8TD35 194 aa6.38□□□□□ -1.39
LSM8-202ENST00000411938 ASB15Q8WXK1 588 aa6.38□□□□□ -1.39
LSM8-202ENST00000411938 PEX13Q92968 403 aa6.38□□□□□ -1.39
LSM8-202ENST00000411938 TBC1D20Q96BZ9 403 aa6.38□□□□□ -1.39
LSM8-202ENST00000411938 DUS3LQ96G46 650 aaKnown RBP6.38□□□□□ -1.39
LSM8-202ENST00000411938 FOPNLQ96NB1 174 aa6.38□□□□□ -1.39
LSM8-202ENST00000411938 PTCHD1Q96NR3 888 aa6.38□□□□□ -1.39
LSM8-202ENST00000411938 OR1F2PQ96R84 312 aa6.38□□□□□ -1.39
LSM8-202ENST00000411938 NDNQ99608 321 aa6.38□□□□□ -1.39
LSM8-202ENST00000411938 FAM173AQ9BQD7 235 aa6.38□□□□□ -1.39
LSM8-202ENST00000411938 MRPL1Q9BYD6 325 aaKnown RBP6.38□□□□□ -1.39
LSM8-202ENST00000411938 GSTO2Q9H4Y5 243 aa6.38□□□□□ -1.39
LSM8-202ENST00000411938 COPS7BQ9H9Q2 264 aaPredicted RBP6.38□□□□□ -1.39
LSM8-202ENST00000411938 POPDC3Q9HBV1 291 aa6.38□□□□□ -1.39
LSM8-202ENST00000411938 PTTG2Q9NZH5 202 aa6.38□□□□□ -1.39
LSM8-202ENST00000411938 SPATA7Q9P0W8 599 aa6.38□□□□□ -1.39
LSM8-202ENST00000411938 SPRR3Q9UBC9 169 aa6.38□□□□□ -1.39
LSM8-202ENST00000411938 TSR3Q9UJK0 312 aaKnown RBP6.38□□□□□ -1.39
LSM8-202ENST00000411938 CNOT11Q9UKZ1 510 aaKnown RBP6.38□□□□□ -1.39
LSM8-202ENST00000411938 YARS2Q9Y2Z4 477 aaKnown RBP6.38□□□□□ -1.39
LSM8-202ENST00000411938 KIAA1549Q9HCM3 1950 aa6.37□□□□□ -1.39
LSM8-202ENST00000411938 TCRBV3S1A0A5B6 114 aa6.37□□□□□ -1.39
LSM8-202ENST00000411938 CCDC162PA2VCL2 907 aa6.37□□□□□ -1.39
LSM8-202ENST00000411938 A8MV72 311 aaPredicted RBP6.37□□□□□ -1.39
LSM8-202ENST00000411938 PSMD12O00232 456 aaPredicted RBP6.37□□□□□ -1.39
LSM8-202ENST00000411938 OR6B1O95007 311 aa6.37□□□□□ -1.39
LSM8-202ENST00000411938 STAMBPO95630 424 aa6.37□□□□□ -1.39
LSM8-202ENST00000411938 EPPINO95925 133 aa6.37□□□□□ -1.39
LSM8-202ENST00000411938 FHP07954 510 aa6.37□□□□□ -1.39
LSM8-202ENST00000411938 CCDC166P0CW27 439 aa6.37□□□□□ -1.39
LSM8-202ENST00000411938 OGNP20774 298 aaKnown RBP6.37□□□□□ -1.39
LSM8-202ENST00000411938 ENDOUP21128 410 aaKnown RBP6.37□□□□□ -1.39
LSM8-202ENST00000411938 CNR1P21554 472 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms