RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 RHBDF2Q6PJF5 856 aa4.35□□□□□ -1.71
LSM5-205ENST00000409952 FCRLAQ7L513 359 aa4.35□□□□□ -1.71
LSM5-205ENST00000409952 SATL1Q86VE3 508 aa4.35□□□□□ -1.71
LSM5-205ENST00000409952 FJX1Q86VR8 437 aa4.35□□□□□ -1.71
LSM5-205ENST00000409952 TGIF2LXQ8IUE1 241 aa4.35□□□□□ -1.71
LSM5-205ENST00000409952 ZNF114Q8NC26 417 aa4.35□□□□□ -1.71
LSM5-205ENST00000409952 SLC37A3Q8NCC5 494 aa4.35□□□□□ -1.71
LSM5-205ENST00000409952 KCNH5Q8NCM2 988 aa4.35□□□□□ -1.71
LSM5-205ENST00000409952 SMRP1Q8NCR6 262 aa4.35□□□□□ -1.71
LSM5-205ENST00000409952 PRSS3P2Q8NHM4 247 aa4.35□□□□□ -1.71
LSM5-205ENST00000409952 NANPQ8TBE9 248 aa4.35□□□□□ -1.71
LSM5-205ENST00000409952 M1APQ8TC57 530 aa4.35□□□□□ -1.71
LSM5-205ENST00000409952 HAVCR1Q96D42 359 aa4.35□□□□□ -1.71
LSM5-205ENST00000409952 LURAP1Q96LR2 239 aa4.35□□□□□ -1.71
LSM5-205ENST00000409952 IL12RB2Q99665 862 aa4.35□□□□□ -1.71
LSM5-205ENST00000409952 BPIFA3Q9BQP9 254 aa4.35□□□□□ -1.71
LSM5-205ENST00000409952 CXXC4Q9H2H0 198 aa4.35□□□□□ -1.71
LSM5-205ENST00000409952 FKRPQ9H9S5 495 aa4.35□□□□□ -1.71
LSM5-205ENST00000409952 IL1RL2Q9HB29 575 aa4.35□□□□□ -1.71
LSM5-205ENST00000409952 LRRC4Q9HBW1 653 aa4.35□□□□□ -1.71
LSM5-205ENST00000409952 MCCC2Q9HCC0 563 aa4.35□□□□□ -1.71
LSM5-205ENST00000409952 MED17Q9NVC6 651 aa4.35□□□□□ -1.71
LSM5-205ENST00000409952 FAM120CQ9NX05 1096 aaKnown RBP4.35□□□□□ -1.71
LSM5-205ENST00000409952 ADAM28Q9UKQ2 775 aa4.35□□□□□ -1.71
LSM5-205ENST00000409952 IKZF3Q9UKT9 509 aa4.35□□□□□ -1.71
LSM5-205ENST00000409952 WIPI2Q9Y4P8 454 aa4.35□□□□□ -1.71
LSM5-205ENST00000409952 INSL5Q9Y5Q6 135 aa4.35□□□□□ -1.71
LSM5-205ENST00000409952 KLF2Q9Y5W3 355 aaPredicted RBP4.35□□□□□ -1.71
LSM5-205ENST00000409952 ESYT2A0FGR8 921 aa4.34□□□□□ -1.71
LSM5-205ENST00000409952 FBLL1A6NHQ2 334 aaKnown RBP4.34□□□□□ -1.71
LSM5-205ENST00000409952 SHISA7A6NL88 538 aa4.34□□□□□ -1.71
LSM5-205ENST00000409952 SUPT3HB4E1H0 165 aa4.34□□□□□ -1.71
LSM5-205ENST00000409952 TNFRSF13BO14836 293 aaPredicted RBP4.34□□□□□ -1.71
LSM5-205ENST00000409952 NBR2O15453 112 aa4.34□□□□□ -1.71
LSM5-205ENST00000409952 SYNGR3O43761 229 aa4.34□□□□□ -1.71
LSM5-205ENST00000409952 CTSVO60911 334 aa4.34□□□□□ -1.71
LSM5-205ENST00000409952 GLRA3O75311 464 aa4.34□□□□□ -1.71
LSM5-205ENST00000409952 FGF19O95750 216 aa4.34□□□□□ -1.71
LSM5-205ENST00000409952 PGK1P00558 417 aa4.34□□□□□ -1.71
LSM5-205ENST00000409952 NPPAP01160 153 aa4.34□□□□□ -1.71
LSM5-205ENST00000409952 FCGR1AP12314 374 aa4.34□□□□□ -1.71
LSM5-205ENST00000409952 TNFRSF1BP20333 461 aa4.34□□□□□ -1.71
LSM5-205ENST00000409952 SLC11A1P49279 550 aa4.34□□□□□ -1.71
LSM5-205ENST00000409952 CLDN8P56748 225 aa4.34□□□□□ -1.71
LSM5-205ENST00000409952 HERV-K104P61576 105 aa4.34□□□□□ -1.71
LSM5-205ENST00000409952 RPS15P62841 145 aaKnown RBP4.34□□□□□ -1.71
LSM5-205ENST00000409952 Q0VFX4 171 aa4.34□□□□□ -1.71
LSM5-205ENST00000409952 ZP4Q12836 540 aa4.34□□□□□ -1.71
LSM5-205ENST00000409952 Q4G0T1 1027 aa4.34□□□□□ -1.71
LSM5-205ENST00000409952 XKR7Q5GH72 579 aa4.34□□□□□ -1.71
LSM5-205ENST00000409952 SLC25A53Q5H9E4 307 aa4.34□□□□□ -1.71
LSM5-205ENST00000409952 LCN1P1Q5VSP4 162 aa4.34□□□□□ -1.71
LSM5-205ENST00000409952 DOK6Q6PKX4 331 aa4.34□□□□□ -1.71
LSM5-205ENST00000409952 ZNF562Q6V9R5 426 aa4.34□□□□□ -1.71
LSM5-205ENST00000409952 TMEM184AQ6ZMB5 413 aa4.34□□□□□ -1.71
LSM5-205ENST00000409952 CENPQQ7L2Z9 268 aaPredicted RBP4.34□□□□□ -1.71
LSM5-205ENST00000409952 NET1Q7Z628 596 aaPredicted RBP4.34□□□□□ -1.71
LSM5-205ENST00000409952 YTHDF3Q7Z739 585 aaKnown RBP4.34□□□□□ -1.71
LSM5-205ENST00000409952 KIAA1328Q86T90 577 aa4.34□□□□□ -1.71
LSM5-205ENST00000409952 KATNAL2Q8IYT4 538 aa4.34□□□□□ -1.71
LSM5-205ENST00000409952 SLC38A6Q8IZM9 456 aa4.34□□□□□ -1.71
LSM5-205ENST00000409952 LINC00518Q8N0U6 118 aa4.34□□□□□ -1.71
LSM5-205ENST00000409952 C8orf46Q8TAG6 207 aa4.34□□□□□ -1.71
LSM5-205ENST00000409952 FAM81AQ8TBF8 368 aa4.34□□□□□ -1.71
LSM5-205ENST00000409952 MYLPFQ96A32 169 aa4.34□□□□□ -1.71
LSM5-205ENST00000409952 PNPLA2Q96AD5 504 aa4.34□□□□□ -1.71
LSM5-205ENST00000409952 UPRTQ96BW1 309 aa4.34□□□□□ -1.71
LSM5-205ENST00000409952 LRRC39Q96DD0 335 aa4.34□□□□□ -1.71
LSM5-205ENST00000409952 LMLNQ96KR4 655 aa4.34□□□□□ -1.71
LSM5-205ENST00000409952 AMDHD1Q96NU7 426 aa4.34□□□□□ -1.71
LSM5-205ENST00000409952 FAM49AQ9H0Q0 323 aaPredicted RBP4.34□□□□□ -1.71
LSM5-205ENST00000409952 GLT8D2Q9H1C3 349 aa4.34□□□□□ -1.71
LSM5-205ENST00000409952 TMEM185BQ9H7F4 350 aa4.34□□□□□ -1.71
LSM5-205ENST00000409952 GPR83Q9NYM4 423 aa4.34□□□□□ -1.71
LSM5-205ENST00000409952 GNG12Q9UBI6 72 aa4.34□□□□□ -1.71
LSM5-205ENST00000409952 PISDQ9UG56 409 aa4.34□□□□□ -1.71
LSM5-205ENST00000409952 ZNF639Q9UID6 485 aa4.34□□□□□ -1.71
LSM5-205ENST00000409952 ERRFI1Q9UJM3 462 aaPredicted RBP4.34□□□□□ -1.71
LSM5-205ENST00000409952 RALYQ9UKM9 306 aaKnown RBP4.34□□□□□ -1.71
LSM5-205ENST00000409952 POMT2Q9UKY4 750 aa4.34□□□□□ -1.71
LSM5-205ENST00000409952 NINLQ9Y2I6 1382 aa4.33□□□□□ -1.72
LSM5-205ENST00000409952 IGLV5-37A0A075B6J1 123 aa4.33□□□□□ -1.72
LSM5-205ENST00000409952 A0A087WZ39 114 aa4.33□□□□□ -1.72
LSM5-205ENST00000409952 LOC100653049A0A140TA62 436 aa4.33□□□□□ -1.72
LSM5-205ENST00000409952 BTBD17A6NE02 478 aa4.33□□□□□ -1.72
LSM5-205ENST00000409952 DNAJC9-AS1A6NH13 148 aa4.33□□□□□ -1.72
LSM5-205ENST00000409952 NKX6-3A6NJ46 265 aa4.33□□□□□ -1.72
LSM5-205ENST00000409952 ACOD1A6NK06 481 aa4.33□□□□□ -1.72
LSM5-205ENST00000409952 SNURFLB1AK76 121 aa4.33□□□□□ -1.72
LSM5-205ENST00000409952 H3BMH7 237 aa4.33□□□□□ -1.72
LSM5-205ENST00000409952 ATP6V0E1O15342 81 aa4.33□□□□□ -1.72
LSM5-205ENST00000409952 AKR7A2O43488 359 aa4.33□□□□□ -1.72
LSM5-205ENST00000409952 DUX1O43812 170 aa4.33□□□□□ -1.72
LSM5-205ENST00000409952 DFNA5O60443 496 aa4.33□□□□□ -1.72
LSM5-205ENST00000409952 CDK2AP2O75956 126 aa4.33□□□□□ -1.72
LSM5-205ENST00000409952 KRT34O76011 436 aa4.33□□□□□ -1.72
LSM5-205ENST00000409952 ANXA9O76027 345 aa4.33□□□□□ -1.72
LSM5-205ENST00000409952 NXPH2O95156 264 aa4.33□□□□□ -1.72
LSM5-205ENST00000409952 LGI1O95970 557 aa4.33□□□□□ -1.72
LSM5-205ENST00000409952 OPN1LWP04000 364 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms