RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 ATG16L1Q676U5 607 aa28.71■■■□□ 2.19
TRAF3IP1-203ENST00000409739 TMEM107Q6UX40 140 aa28.71■■■□□ 2.19
TRAF3IP1-203ENST00000409739 FAM13CQ8NE31 585 aa28.71■■■□□ 2.19
TRAF3IP1-203ENST00000409739 OR2M7Q8NG81 312 aa28.71■■■□□ 2.19
TRAF3IP1-203ENST00000409739 OR10G3Q8NGC4 313 aa28.71■■■□□ 2.19
TRAF3IP1-203ENST00000409739 PRR7Q8TB68 274 aa28.71■■■□□ 2.19
TRAF3IP1-203ENST00000409739 PAQR8Q8TEZ7 354 aa28.71■■■□□ 2.19
TRAF3IP1-203ENST00000409739 MTERF3Q96E29 417 aa28.71■■■□□ 2.19
TRAF3IP1-203ENST00000409739 NUF2Q9BZD4 464 aa28.71■■■□□ 2.19
TRAF3IP1-203ENST00000409739 AKTIPQ9H8T0 292 aa28.71■■■□□ 2.19
TRAF3IP1-203ENST00000409739 SH3BP4Q9P0V3 963 aa28.71■■■□□ 2.19
TRAF3IP1-203ENST00000409739 NPFFR2Q9Y5X5 522 aa28.71■■■□□ 2.19
TRAF3IP1-203ENST00000409739 DOPEY2Q9Y3R5 2298 aa28.71■■■□□ 2.19
TRAF3IP1-203ENST00000409739 DNAJC13O75165 2243 aa28.7■■■□□ 2.19
TRAF3IP1-203ENST00000409739 LRRK2Q5S007 2527 aa28.7■■■□□ 2.19
TRAF3IP1-203ENST00000409739 A0A087WV62 115 aa28.7■■■□□ 2.18
TRAF3IP1-203ENST00000409739 NME6O75414 186 aaPredicted RBP28.7■■■□□ 2.18
TRAF3IP1-203ENST00000409739 ZIC2O95409 532 aaPredicted RBP28.7■■■□□ 2.18
TRAF3IP1-203ENST00000409739 P04436 131 aa28.7■■■□□ 2.18
TRAF3IP1-203ENST00000409739 PRPS2P11908 318 aa28.7■■■□□ 2.18
TRAF3IP1-203ENST00000409739 ABCD3P28288 659 aa28.7■■■□□ 2.18
TRAF3IP1-203ENST00000409739 KCNK10P57789 538 aa28.7■■■□□ 2.18
TRAF3IP1-203ENST00000409739 MAD2L1Q13257 205 aaPredicted RBP28.7■■■□□ 2.18
TRAF3IP1-203ENST00000409739 SMU1Q2TAY7 513 aa28.7■■■□□ 2.18
TRAF3IP1-203ENST00000409739 PRR22Q8IZ63 422 aa28.7■■■□□ 2.18
TRAF3IP1-203ENST00000409739 GOLGA6L1Q8N7Z2 621 aa28.7■■■□□ 2.18
TRAF3IP1-203ENST00000409739 LCORQ96JN0 433 aaPredicted RBP28.7■■■□□ 2.18
TRAF3IP1-203ENST00000409739 ASIC5Q9NY37 505 aa28.7■■■□□ 2.18
TRAF3IP1-203ENST00000409739 SEC14L3Q9UDX4 400 aa28.7■■■□□ 2.18
TRAF3IP1-203ENST00000409739 ATP6V1HQ9UI12 483 aa28.7■■■□□ 2.18
TRAF3IP1-203ENST00000409739 CHCHD2Q9Y6H1 151 aaPredicted RBP28.7■■■□□ 2.18
TRAF3IP1-203ENST00000409739 FREM3P0C091 2139 aa28.69■■■□□ 2.18
TRAF3IP1-203ENST00000409739 PLOD2O00469 737 aa28.69■■■□□ 2.18
TRAF3IP1-203ENST00000409739 SASH3O75995 380 aa28.69■■■□□ 2.18
TRAF3IP1-203ENST00000409739 CNR1P21554 472 aa28.69■■■□□ 2.18
TRAF3IP1-203ENST00000409739 FRKP42685 505 aaPredicted RBP28.69■■■□□ 2.18
TRAF3IP1-203ENST00000409739 DCAF7P61962 342 aa28.69■■■□□ 2.18
TRAF3IP1-203ENST00000409739 OCRLQ01968 901 aa28.69■■■□□ 2.18
TRAF3IP1-203ENST00000409739 EMX2Q04743 252 aa28.69■■■□□ 2.18
TRAF3IP1-203ENST00000409739 RPS6KA2Q15349 733 aa28.69■■■□□ 2.18
TRAF3IP1-203ENST00000409739 SLC22A10Q63ZE4 541 aa28.69■■■□□ 2.18
TRAF3IP1-203ENST00000409739 GFRALQ6UXV0 394 aa28.69■■■□□ 2.18
TRAF3IP1-203ENST00000409739 ZNF551Q7Z340 670 aaPredicted RBP28.69■■■□□ 2.18
TRAF3IP1-203ENST00000409739 R3HCC1LQ7Z5L2 792 aaKnown RBP28.69■■■□□ 2.18
TRAF3IP1-203ENST00000409739 OR5M3Q8NGP4 307 aa28.69■■■□□ 2.18
TRAF3IP1-203ENST00000409739 VSTM2LQ96N03 204 aa28.69■■■□□ 2.18
TRAF3IP1-203ENST00000409739 GPR137Q96N19 417 aa28.69■■■□□ 2.18
TRAF3IP1-203ENST00000409739 BTBD9Q96Q07 612 aa28.69■■■□□ 2.18
TRAF3IP1-203ENST00000409739 MEAF6Q9HAF1 191 aa28.69■■■□□ 2.18
TRAF3IP1-203ENST00000409739 FOLH1BQ9HBA9 442 aa28.69■■■□□ 2.18
TRAF3IP1-203ENST00000409739 NOP53Q9NZM5 478 aaKnown RBP28.69■■■□□ 2.18
TRAF3IP1-203ENST00000409739 EIF3LQ9Y262 564 aaKnown RBP28.69■■■□□ 2.18
TRAF3IP1-203ENST00000409739 CAPN14A8MX76 684 aa28.68■■■□□ 2.18
TRAF3IP1-203ENST00000409739 HMGB1P1B2RPK0 211 aaPredicted RBP28.68■■■□□ 2.18
TRAF3IP1-203ENST00000409739 NPIPA5E9PKD4 350 aa28.68■■■□□ 2.18
TRAF3IP1-203ENST00000409739 UNC5CO95185 931 aa28.68■■■□□ 2.18
TRAF3IP1-203ENST00000409739 PPICP45877 212 aa28.68■■■□□ 2.18
TRAF3IP1-203ENST00000409739 TMED10P49755 219 aaKnown RBP28.68■■■□□ 2.18
TRAF3IP1-203ENST00000409739 FBXW4P57775 412 aa28.68■■■□□ 2.18
TRAF3IP1-203ENST00000409739 HSPB3Q12988 150 aa28.68■■■□□ 2.18
TRAF3IP1-203ENST00000409739 FAM47EQ6ZV65 393 aa28.68■■■□□ 2.18
TRAF3IP1-203ENST00000409739 FBXW8Q8N3Y1 598 aa28.68■■■□□ 2.18
TRAF3IP1-203ENST00000409739 OR7A2PQ8NGA2 310 aa28.68■■■□□ 2.18
TRAF3IP1-203ENST00000409739 HSPBAP1Q96EW2 488 aa28.68■■■□□ 2.18
TRAF3IP1-203ENST00000409739 FAM173AQ9BQD7 235 aa28.68■■■□□ 2.18
TRAF3IP1-203ENST00000409739 NPIPA1Q9UND3 350 aa28.68■■■□□ 2.18
TRAF3IP1-203ENST00000409739 C19orf53Q9UNZ5 99 aaPredicted RBP28.68■■■□□ 2.18
TRAF3IP1-203ENST00000409739 GPR55Q9Y2T6 319 aaPredicted RBP28.68■■■□□ 2.18
TRAF3IP1-203ENST00000409739 COL12A1Q99715 3063 aa28.68■■■□□ 2.18
TRAF3IP1-203ENST00000409739 DIDO1Q9BTC0 2240 aaKnown RBP28.67■■■□□ 2.18
TRAF3IP1-203ENST00000409739 FRG2CA6NGY1 282 aa28.67■■■□□ 2.18
TRAF3IP1-203ENST00000409739 ACOX3O15254 700 aa28.67■■■□□ 2.18
TRAF3IP1-203ENST00000409739 COQ9O75208 318 aa28.67■■■□□ 2.18
TRAF3IP1-203ENST00000409739 G6PDP11413 515 aa28.67■■■□□ 2.18
TRAF3IP1-203ENST00000409739 DRD5P21918 477 aa28.67■■■□□ 2.18
TRAF3IP1-203ENST00000409739 PIGAP37287 484 aa28.67■■■□□ 2.18
TRAF3IP1-203ENST00000409739 RPL3P39023 403 aaKnown RBP28.67■■■□□ 2.18
TRAF3IP1-203ENST00000409739 DNASE1L1P49184 302 aa28.67■■■□□ 2.18
TRAF3IP1-203ENST00000409739 PRAMEF20Q5VT98 475 aa28.67■■■□□ 2.18
TRAF3IP1-203ENST00000409739 GK5Q6ZS86 529 aa28.67■■■□□ 2.18
TRAF3IP1-203ENST00000409739 OR2L13Q8N349 312 aa28.67■■■□□ 2.18
TRAF3IP1-203ENST00000409739 ZFP28Q8NHY6 868 aa28.67■■■□□ 2.18
TRAF3IP1-203ENST00000409739 ELP4Q96EB1 424 aa28.67■■■□□ 2.18
TRAF3IP1-203ENST00000409739 ZBED6CLQ96FA7 236 aaPredicted RBP28.67■■■□□ 2.18
TRAF3IP1-203ENST00000409739 DDX18Q9NVP1 670 aaKnown RBP28.67■■■□□ 2.18
TRAF3IP1-203ENST00000409739 TAS2R9Q9NYW1 312 aa28.67■■■□□ 2.18
TRAF3IP1-203ENST00000409739 MARCOQ9UEW3 520 aaPredicted RBP28.67■■■□□ 2.18
TRAF3IP1-203ENST00000409739 CNOT11Q9UKZ1 510 aaKnown RBP28.67■■■□□ 2.18
TRAF3IP1-203ENST00000409739 UPK1AO00322 258 aa28.66■■■□□ 2.18
TRAF3IP1-203ENST00000409739 KLF11O14901 512 aa28.66■■■□□ 2.18
TRAF3IP1-203ENST00000409739 TFECO14948 347 aaPredicted RBP28.66■■■□□ 2.18
TRAF3IP1-203ENST00000409739 ERN1O75460 977 aaKnown RBP28.66■■■□□ 2.18
TRAF3IP1-203ENST00000409739 PSMG1O95456 288 aa28.66■■■□□ 2.18
TRAF3IP1-203ENST00000409739 IFI6P09912 130 aa28.66■■■□□ 2.18
TRAF3IP1-203ENST00000409739 CT45A8P0DMV1 189 aa28.66■■■□□ 2.18
TRAF3IP1-203ENST00000409739 CT45A9P0DMV2 189 aa28.66■■■□□ 2.18
TRAF3IP1-203ENST00000409739 CORO7P57737 925 aa28.66■■■□□ 2.18
TRAF3IP1-203ENST00000409739 CT45A2Q5DJT8 189 aa28.66■■■□□ 2.18
TRAF3IP1-203ENST00000409739 NPSR1Q6W5P4 371 aa28.66■■■□□ 2.18
TRAF3IP1-203ENST00000409739 FAM26EQ8N5C1 309 aa28.66■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms