RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 DUSP8Q13202 625 aa11.62□□□□□ -0.55
CHMP3-204ENST00000409727 NSDHLQ15738 373 aa11.62□□□□□ -0.55
CHMP3-204ENST00000409727 DUSP5Q16690 384 aa11.62□□□□□ -0.55
CHMP3-204ENST00000409727 OGFRL1Q5TC84 451 aaPredicted RBP11.62□□□□□ -0.55
CHMP3-204ENST00000409727 CDC73Q6P1J9 531 aa11.62□□□□□ -0.55
CHMP3-204ENST00000409727 ZDHHC21Q8IVQ6 265 aa11.62□□□□□ -0.55
CHMP3-204ENST00000409727 SLC30A8Q8IWU4 369 aa11.62□□□□□ -0.55
CHMP3-204ENST00000409727 LGI4Q8N135 537 aa11.62□□□□□ -0.55
CHMP3-204ENST00000409727 GALNT4Q8N4A0 578 aa11.62□□□□□ -0.55
CHMP3-204ENST00000409727 BMPERQ8N8U9 685 aa11.62□□□□□ -0.55
CHMP3-204ENST00000409727 SPPL2AQ8TCT8 520 aa11.62□□□□□ -0.55
CHMP3-204ENST00000409727 MIPOL1Q8TD10 442 aa11.62□□□□□ -0.55
CHMP3-204ENST00000409727 CTHRC1Q96CG8 243 aa11.62□□□□□ -0.55
CHMP3-204ENST00000409727 QRSL1Q9H0R6 528 aaKnown RBP11.62□□□□□ -0.55
CHMP3-204ENST00000409727 MAGIXQ9H6Y5 334 aa11.62□□□□□ -0.55
CHMP3-204ENST00000409727 YY1AP1Q9H869 796 aa11.62□□□□□ -0.55
CHMP3-204ENST00000409727 MKKSQ9NPJ1 570 aaPredicted RBP11.62□□□□□ -0.55
CHMP3-204ENST00000409727 NTMQ9P121 344 aa11.62□□□□□ -0.55
CHMP3-204ENST00000409727 ERVK-19Q9WJR5 959 aa11.62□□□□□ -0.55
CHMP3-204ENST00000409727 C17orf105B2RV13 164 aa11.61□□□□□ -0.55
CHMP3-204ENST00000409727 GNGT2O14610 69 aa11.61□□□□□ -0.55
CHMP3-204ENST00000409727 RFPL3O75679 317 aa11.61□□□□□ -0.55
CHMP3-204ENST00000409727 CST1P01037 141 aa11.61□□□□□ -0.55
CHMP3-204ENST00000409727 ACP2P11117 423 aa11.61□□□□□ -0.55
CHMP3-204ENST00000409727 FGF5P12034 268 aa11.61□□□□□ -0.55
CHMP3-204ENST00000409727 CRISP3P54108 245 aa11.61□□□□□ -0.55
CHMP3-204ENST00000409727 SELENOWP63302 87 aa11.61□□□□□ -0.55
CHMP3-204ENST00000409727 DCDP81605 110 aaKnown RBP11.61□□□□□ -0.55
CHMP3-204ENST00000409727 INSM1Q01101 510 aaPredicted RBP11.61□□□□□ -0.55
CHMP3-204ENST00000409727 SERTAD2Q14140 314 aa11.61□□□□□ -0.55
CHMP3-204ENST00000409727 IL11RAQ14626 422 aa11.61□□□□□ -0.55
CHMP3-204ENST00000409727 ATP6AP1Q15904 470 aa11.61□□□□□ -0.55
CHMP3-204ENST00000409727 CRB2Q5IJ48 1285 aa11.61□□□□□ -0.55
CHMP3-204ENST00000409727 CCNJQ5T5M9 372 aa11.61□□□□□ -0.55
CHMP3-204ENST00000409727 ATAD3BQ5T9A4 648 aa11.61□□□□□ -0.55
CHMP3-204ENST00000409727 IRAK1BP1Q5VVH5 260 aa11.61□□□□□ -0.55
CHMP3-204ENST00000409727 LCN10Q6JVE6 187 aa11.61□□□□□ -0.55
CHMP3-204ENST00000409727 CCDC80Q76M96 950 aa11.61□□□□□ -0.55
CHMP3-204ENST00000409727 PATL1Q86TB9 770 aaKnown RBP11.61□□□□□ -0.55
CHMP3-204ENST00000409727 PIK3R3Q92569 461 aa11.61□□□□□ -0.55
CHMP3-204ENST00000409727 COL21A1Q96P44 957 aa11.61□□□□□ -0.55
CHMP3-204ENST00000409727 CDC6Q99741 560 aa11.61□□□□□ -0.55
CHMP3-204ENST00000409727 CMKLR1Q99788 373 aa11.61□□□□□ -0.55
CHMP3-204ENST00000409727 DOHHQ9BU89 302 aa11.61□□□□□ -0.55
CHMP3-204ENST00000409727 VN1R1Q9GZP7 353 aa11.61□□□□□ -0.55
CHMP3-204ENST00000409727 VCX3BQ9H321 246 aa11.61□□□□□ -0.55
CHMP3-204ENST00000409727 SOX17Q9H6I2 414 aaPredicted RBP11.61□□□□□ -0.55
CHMP3-204ENST00000409727 SLC39A1Q9NY26 324 aa11.61□□□□□ -0.55
CHMP3-204ENST00000409727 ABCG2Q9UNQ0 655 aa11.61□□□□□ -0.55
CHMP3-204ENST00000409727 DTNAQ9Y4J8 743 aa11.61□□□□□ -0.55
CHMP3-204ENST00000409727 FER1L5A0AVI2 2057 aa11.61□□□□□ -0.55
CHMP3-204ENST00000409727 PMS2P1A4D2B8 440 aa11.61□□□□□ -0.55
CHMP3-204ENST00000409727 A8MVJ9 347 aa11.61□□□□□ -0.55
CHMP3-204ENST00000409727 TMEM229AB2RXF0 380 aa11.61□□□□□ -0.55
CHMP3-204ENST00000409727 PDLIM1O00151 329 aa11.61□□□□□ -0.55
CHMP3-204ENST00000409727 CLOCKO15516 846 aa11.61□□□□□ -0.55
CHMP3-204ENST00000409727 SLITRK5O94991 958 aa11.61□□□□□ -0.55
CHMP3-204ENST00000409727 IFNA14P01570 189 aa11.61□□□□□ -0.55
CHMP3-204ENST00000409727 ALOX5P09917 674 aa11.61□□□□□ -0.55
CHMP3-204ENST00000409727 S1PR1P21453 382 aa11.61□□□□□ -0.55
CHMP3-204ENST00000409727 RFX3P48380 749 aa11.61□□□□□ -0.55
CHMP3-204ENST00000409727 MAPK10P53779 464 aa11.61□□□□□ -0.55
CHMP3-204ENST00000409727 IST1P53990 364 aa11.61□□□□□ -0.55
CHMP3-204ENST00000409727 AQP4P55087 323 aa11.61□□□□□ -0.55
CHMP3-204ENST00000409727 KCNJ10P78508 379 aa11.61□□□□□ -0.55
CHMP3-204ENST00000409727 VLDLRP98155 873 aa11.61□□□□□ -0.55
CHMP3-204ENST00000409727 RHAGQ02094 409 aa11.61□□□□□ -0.55
CHMP3-204ENST00000409727 OCA2Q04671 838 aa11.61□□□□□ -0.55
CHMP3-204ENST00000409727 MAP4K2Q12851 820 aa11.61□□□□□ -0.55
CHMP3-204ENST00000409727 PPP1R8Q12972 351 aaKnown RBP11.61□□□□□ -0.55
CHMP3-204ENST00000409727 NRF1Q16656 503 aa11.61□□□□□ -0.55
CHMP3-204ENST00000409727 DUSP7Q16829 419 aa11.61□□□□□ -0.55
CHMP3-204ENST00000409727 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.61□□□□□ -0.55
CHMP3-204ENST00000409727 SFT2D3Q587I9 215 aa11.61□□□□□ -0.55
CHMP3-204ENST00000409727 MLIPQ5VWP3 458 aa11.61□□□□□ -0.55
CHMP3-204ENST00000409727 QSOX2Q6ZRP7 698 aa11.61□□□□□ -0.55
CHMP3-204ENST00000409727 ARMC8Q8IUR7 673 aa11.61□□□□□ -0.55
CHMP3-204ENST00000409727 STT3BQ8TCJ2 826 aa11.61□□□□□ -0.55
CHMP3-204ENST00000409727 GPR151Q8TDV0 419 aa11.61□□□□□ -0.55
CHMP3-204ENST00000409727 LZICQ8WZA0 190 aa11.61□□□□□ -0.55
CHMP3-204ENST00000409727 CENPNQ96H22 339 aaPredicted RBP11.61□□□□□ -0.55
CHMP3-204ENST00000409727 ULBP3Q9BZM4 244 aa11.61□□□□□ -0.55
CHMP3-204ENST00000409727 AKIRIN1Q9H9L7 192 aaPredicted RBP11.61□□□□□ -0.55
CHMP3-204ENST00000409727 AKAP7Q9P0M2 348 aaPredicted RBP11.61□□□□□ -0.55
CHMP3-204ENST00000409727 IFT80Q9P2H3 777 aaPredicted RBP11.61□□□□□ -0.55
CHMP3-204ENST00000409727 SEC14L3Q9UDX4 400 aa11.61□□□□□ -0.55
CHMP3-204ENST00000409727 OAZ3Q9UMX2 235 aa11.61□□□□□ -0.55
CHMP3-204ENST00000409727 SH3GLB1Q9Y371 365 aa11.61□□□□□ -0.55
CHMP3-204ENST00000409727 LOXL2Q9Y4K0 774 aa11.61□□□□□ -0.55
CHMP3-204ENST00000409727 MMACHCQ9Y4U1 282 aa11.61□□□□□ -0.55
CHMP3-204ENST00000409727 U3KQV3 271 aa11.61□□□□□ -0.55
CHMP3-204ENST00000409727 TEX51A0A1B0GUA7 166 aa11.6□□□□□ -0.55
CHMP3-204ENST00000409727 DUXAA6NLW8 204 aa11.6□□□□□ -0.55
CHMP3-204ENST00000409727 ASNA1O43681 348 aa11.6□□□□□ -0.55
CHMP3-204ENST00000409727 CPNE3O75131 537 aaKnown RBP11.6□□□□□ -0.55
CHMP3-204ENST00000409727 COQ9O75208 318 aa11.6□□□□□ -0.55
CHMP3-204ENST00000409727 FABP3P05413 133 aa11.6□□□□□ -0.55
CHMP3-204ENST00000409727 HBQ1P09105 142 aa11.6□□□□□ -0.55
CHMP3-204ENST00000409727 ZGLP1P0C6A0 271 aa11.6□□□□□ -0.55
CHMP3-204ENST00000409727 ZNF23P17027 643 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms