RNA–Protein interactions for RNA: ENST00000409617.5

SERF2-208, Transcript of small EDRK-rich factor 2, human

TSL 2

Gene SERF2, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SERF2-208	ENST00000409617	CD46	P15529	392 aa		13.64	□□□□□ -0.23
SERF2-208	ENST00000409617	GPC1	P35052	558 aa		13.64	□□□□□ -0.23
SERF2-208	ENST00000409617	KIR3DL1	P43629	444 aa		13.64	□□□□□ -0.23
SERF2-208	ENST00000409617	CDK9	P50750	372 aa	Known RBP	13.64	□□□□□ -0.23
SERF2-208	ENST00000409617	WNT3	P56703	355 aa		13.64	□□□□□ -0.23
SERF2-208	ENST00000409617	PHC1	P78364	1004 aa		13.64	□□□□□ -0.23
SERF2-208	ENST00000409617	RPS6KA2	Q15349	733 aa		13.64	□□□□□ -0.23
SERF2-208	ENST00000409617	ZNF791	Q3KP31	576 aa	Predicted RBP	13.64	□□□□□ -0.23
SERF2-208	ENST00000409617	ZNF766	Q5HY98	468 aa		13.64	□□□□□ -0.23
SERF2-208	ENST00000409617	COLEC12	Q5KU26	742 aa		13.64	□□□□□ -0.23
SERF2-208	ENST00000409617	OR4F3	Q6IEY1	312 aa		13.64	□□□□□ -0.23
SERF2-208	ENST00000409617	IL20RB	Q6UXL0	311 aa		13.64	□□□□□ -0.23
SERF2-208	ENST00000409617	CYP4Z2P	Q8N1L4	340 aa		13.64	□□□□□ -0.23
SERF2-208	ENST00000409617	GLB1L3	Q8NCI6	653 aa	Predicted RBP	13.64	□□□□□ -0.23
SERF2-208	ENST00000409617	HSPBAP1	Q96EW2	488 aa		13.64	□□□□□ -0.23
SERF2-208	ENST00000409617	LCOR	Q96JN0	433 aa	Predicted RBP	13.64	□□□□□ -0.23
SERF2-208	ENST00000409617	SGCZ	Q96LD1	299 aa		13.64	□□□□□ -0.23
SERF2-208	ENST00000409617	C5orf34	Q96MH7	638 aa		13.64	□□□□□ -0.23
SERF2-208	ENST00000409617	VSTM2L	Q96N03	204 aa		13.64	□□□□□ -0.23
SERF2-208	ENST00000409617	BTBD9	Q96Q07	612 aa		13.64	□□□□□ -0.23
SERF2-208	ENST00000409617	NXF5	Q9H1B4	397 aa	Known RBP	13.64	□□□□□ -0.23
SERF2-208	ENST00000409617	FOLH1B	Q9HBA9	442 aa		13.64	□□□□□ -0.23
SERF2-208	ENST00000409617	SIRT3	Q9NTG7	399 aa	Predicted RBP	13.64	□□□□□ -0.23
SERF2-208	ENST00000409617	DDX18	Q9NVP1	670 aa	Known RBP	13.64	□□□□□ -0.23
SERF2-208	ENST00000409617	HPF1	Q9NWY4	346 aa		13.64	□□□□□ -0.23
SERF2-208	ENST00000409617	ZIM2	Q9NZV7	527 aa		13.64	□□□□□ -0.23
SERF2-208	ENST00000409617	LUZP4	Q9P127	313 aa		13.64	□□□□□ -0.23
SERF2-208	ENST00000409617	ERVK-11	Q9UQG0	969 aa		13.64	□□□□□ -0.23
SERF2-208	ENST00000409617	SPTA1	P02549	2419 aa		13.63	□□□□□ -0.23
SERF2-208	ENST00000409617	FRG2C	A6NGY1	282 aa		13.63	□□□□□ -0.23
SERF2-208	ENST00000409617	TTLL8	A6PVC2	850 aa		13.63	□□□□□ -0.23
SERF2-208	ENST00000409617		E9PBE3	544 aa		13.63	□□□□□ -0.23
SERF2-208	ENST00000409617	ACOX3	O15254	700 aa		13.63	□□□□□ -0.23
SERF2-208	ENST00000409617	EMC8	O43402	210 aa		13.63	□□□□□ -0.23
SERF2-208	ENST00000409617	SLC25A12	O75746	678 aa		13.63	□□□□□ -0.23
SERF2-208	ENST00000409617	C6orf47	O95873	294 aa		13.63	□□□□□ -0.23
SERF2-208	ENST00000409617	FBXO45	P0C2W1	286 aa		13.63	□□□□□ -0.23
SERF2-208	ENST00000409617	CT45A8	P0DMV1	189 aa		13.63	□□□□□ -0.23
SERF2-208	ENST00000409617	CT45A9	P0DMV2	189 aa		13.63	□□□□□ -0.23
SERF2-208	ENST00000409617	NAGA	P17050	411 aa		13.63	□□□□□ -0.23
SERF2-208	ENST00000409617	EFNA1	P20827	205 aa	Predicted RBP	13.63	□□□□□ -0.23
SERF2-208	ENST00000409617	IL12A	P29459	219 aa		13.63	□□□□□ -0.23
SERF2-208	ENST00000409617	NME5	P56597	212 aa		13.63	□□□□□ -0.23
SERF2-208	ENST00000409617	NRG3	P56975	720 aa		13.63	□□□□□ -0.23
SERF2-208	ENST00000409617	PSPH	P78330	225 aa		13.63	□□□□□ -0.23
SERF2-208	ENST00000409617	IRX1	P78414	480 aa	Predicted RBP	13.63	□□□□□ -0.23
SERF2-208	ENST00000409617	INA	Q16352	499 aa		13.63	□□□□□ -0.23
SERF2-208	ENST00000409617	CT45A2	Q5DJT8	189 aa		13.63	□□□□□ -0.23
SERF2-208	ENST00000409617	SPANXN4	Q5MJ08	99 aa		13.63	□□□□□ -0.23
SERF2-208	ENST00000409617	ANXA8L1	Q5VT79	327 aa		13.63	□□□□□ -0.23
SERF2-208	ENST00000409617	RTL4	Q6ZR62	310 aa		13.63	□□□□□ -0.23
SERF2-208	ENST00000409617	MDGA2	Q7Z553	956 aa		13.63	□□□□□ -0.23
SERF2-208	ENST00000409617	GOLM1	Q8NBJ4	401 aa		13.63	□□□□□ -0.23
SERF2-208	ENST00000409617	TMEM178A	Q8NBL3	297 aa		13.63	□□□□□ -0.23
SERF2-208	ENST00000409617	RFWD2	Q8NHY2	731 aa		13.63	□□□□□ -0.23
SERF2-208	ENST00000409617	HOXB13	Q92826	284 aa	Predicted RBP	13.63	□□□□□ -0.23
SERF2-208	ENST00000409617	TMEM125	Q96AQ2	219 aa		13.63	□□□□□ -0.23
SERF2-208	ENST00000409617	EPN3	Q9H201	632 aa		13.63	□□□□□ -0.23
SERF2-208	ENST00000409617	C3orf14	Q9HBI5	128 aa		13.63	□□□□□ -0.23
SERF2-208	ENST00000409617	NPHS2	Q9NP85	383 aa		13.63	□□□□□ -0.23
SERF2-208	ENST00000409617	FGFR1OP2	Q9NVK5	253 aa		13.63	□□□□□ -0.23
SERF2-208	ENST00000409617	NPFFR2	Q9Y5X5	522 aa		13.63	□□□□□ -0.23
SERF2-208	ENST00000409617	PRSS51	A0A1B0GVH4	220 aa		13.62	□□□□□ -0.23
SERF2-208	ENST00000409617	TTC36	A6NLP5	189 aa		13.62	□□□□□ -0.23
SERF2-208	ENST00000409617	CAPN14	A8MX76	684 aa		13.62	□□□□□ -0.23
SERF2-208	ENST00000409617	NME2P1	O60361	137 aa		13.62	□□□□□ -0.23
SERF2-208	ENST00000409617	ERN1	O75460	977 aa	Known RBP	13.62	□□□□□ -0.23
SERF2-208	ENST00000409617	SLC22A3	O75751	556 aa		13.62	□□□□□ -0.23
SERF2-208	ENST00000409617	VIM	P08670	466 aa	Known RBP	13.62	□□□□□ -0.23
SERF2-208	ENST00000409617	NME2	P22392	152 aa		13.62	□□□□□ -0.23
SERF2-208	ENST00000409617	ABCD3	P28288	659 aa		13.62	□□□□□ -0.23
SERF2-208	ENST00000409617	S100A3	P33764	101 aa		13.62	□□□□□ -0.23
SERF2-208	ENST00000409617	PSG6	Q00889	435 aa		13.62	□□□□□ -0.23
SERF2-208	ENST00000409617	INPP5J	Q15735	1006 aa	Predicted RBP	13.62	□□□□□ -0.23
SERF2-208	ENST00000409617	NTRK2	Q16620	822 aa		13.62	□□□□□ -0.23
SERF2-208	ENST00000409617	FAM174B	Q3ZCQ3	159 aa		13.62	□□□□□ -0.23
SERF2-208	ENST00000409617	TMEM64	Q6YI46	380 aa		13.62	□□□□□ -0.23
SERF2-208	ENST00000409617	MIER2	Q8N344	545 aa		13.62	□□□□□ -0.23
SERF2-208	ENST00000409617	VPS37A	Q8NEZ2	397 aa		13.62	□□□□□ -0.23
SERF2-208	ENST00000409617	NUP43	Q8NFH3	380 aa		13.62	□□□□□ -0.23
SERF2-208	ENST00000409617	SNRNP40	Q96DI7	357 aa	Known RBP	13.62	□□□□□ -0.23
SERF2-208	ENST00000409617	SPACA9	Q96E40	222 aa	Predicted RBP	13.62	□□□□□ -0.23
SERF2-208	ENST00000409617	FAM120B	Q96EK7	910 aa	Known RBP	13.62	□□□□□ -0.23
SERF2-208	ENST00000409617	THOC1	Q96FV9	657 aa	Known RBP	13.62	□□□□□ -0.23
SERF2-208	ENST00000409617	MAGED4	Q96JG8	741 aa		13.62	□□□□□ -0.23
SERF2-208	ENST00000409617	MARK4	Q96L34	752 aa		13.62	□□□□□ -0.23
SERF2-208	ENST00000409617	ZNF317	Q96PQ6	595 aa	Predicted RBP	13.62	□□□□□ -0.23
SERF2-208	ENST00000409617	ZBTB18	Q99592	522 aa		13.62	□□□□□ -0.23
SERF2-208	ENST00000409617	BARD1	Q99728	777 aa	Known RBP	13.62	□□□□□ -0.23
SERF2-208	ENST00000409617	LMF2	Q9BU23	707 aa	Known RBP	13.62	□□□□□ -0.23
SERF2-208	ENST00000409617	HES7	Q9BYE0	225 aa		13.62	□□□□□ -0.23
SERF2-208	ENST00000409617	TRIM4	Q9C037	500 aa		13.62	□□□□□ -0.23
SERF2-208	ENST00000409617	NEUROD4	Q9HD90	331 aa		13.62	□□□□□ -0.23
SERF2-208	ENST00000409617	SH2D2A	Q9NP31	389 aa		13.62	□□□□□ -0.23
SERF2-208	ENST00000409617	TIMMDC1	Q9NPL8	285 aa		13.62	□□□□□ -0.23
SERF2-208	ENST00000409617	FAM120C	Q9NX05	1096 aa	Known RBP	13.62	□□□□□ -0.23
SERF2-208	ENST00000409617	MAP10	Q9P2G4	905 aa		13.62	□□□□□ -0.23
SERF2-208	ENST00000409617	DCTN4	Q9UJW0	460 aa		13.62	□□□□□ -0.23
SERF2-208	ENST00000409617	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		13.61	□□□□□ -0.23
SERF2-208	ENST00000409617	NME6	O75414	186 aa	Predicted RBP	13.61	□□□□□ -0.23

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