RNA–Protein interactions for RNA: ENST00000409254.1

LIMS2-203, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMS2, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-203ENST00000409254 EMDP50402 254 aa12.11□□□□□ -0.47
LIMS2-203ENST00000409254 NUDT2P50583 147 aa12.11□□□□□ -0.47
LIMS2-203ENST00000409254 PGDP52209 483 aa12.11□□□□□ -0.47
LIMS2-203ENST00000409254 EEF1A2Q05639 463 aaKnown RBP12.11□□□□□ -0.47
LIMS2-203ENST00000409254 BNIP1Q12981 228 aa12.11□□□□□ -0.47
LIMS2-203ENST00000409254 ART3Q13508 389 aa12.11□□□□□ -0.47
LIMS2-203ENST00000409254 ATP1A4Q13733 1029 aa12.11□□□□□ -0.47
LIMS2-203ENST00000409254 ZNF267Q14586 743 aaPredicted RBP12.11□□□□□ -0.47
LIMS2-203ENST00000409254 EBPQ15125 230 aaKnown RBP12.11□□□□□ -0.47
LIMS2-203ENST00000409254 ZNHIT3Q15649 155 aaPredicted RBP12.11□□□□□ -0.47
LIMS2-203ENST00000409254 SPDYE7PQ495Y7 208 aa12.11□□□□□ -0.47
LIMS2-203ENST00000409254 AP1ARQ63HQ0 302 aa12.11□□□□□ -0.47
LIMS2-203ENST00000409254 FAAH2Q6GMR7 532 aa12.11□□□□□ -0.47
LIMS2-203ENST00000409254 MFSD12Q6NUT3 480 aa12.11□□□□□ -0.47
LIMS2-203ENST00000409254 CDC73Q6P1J9 531 aa12.11□□□□□ -0.47
LIMS2-203ENST00000409254 INO80CQ6PI98 192 aaPredicted RBP12.11□□□□□ -0.47
LIMS2-203ENST00000409254 C16orf89Q6UX73 402 aa12.11□□□□□ -0.47
LIMS2-203ENST00000409254 KBTBD2Q8IY47 623 aa12.11□□□□□ -0.47
LIMS2-203ENST00000409254 PGAM4Q8N0Y7 254 aa12.11□□□□□ -0.47
LIMS2-203ENST00000409254 SLC15A4Q8N697 577 aa12.11□□□□□ -0.47
LIMS2-203ENST00000409254 METTL25Q8N6Q8 603 aa12.11□□□□□ -0.47
LIMS2-203ENST00000409254 POU5F2Q8N7G0 328 aa12.11□□□□□ -0.47
LIMS2-203ENST00000409254 NUP43Q8NFH3 380 aa12.11□□□□□ -0.47
LIMS2-203ENST00000409254 ADCY4Q8NFM4 1077 aa12.11□□□□□ -0.47
LIMS2-203ENST00000409254 OR52N2Q8NGI0 321 aa12.11□□□□□ -0.47
LIMS2-203ENST00000409254 C16orf52Q8NHV5 167 aa12.11□□□□□ -0.47
LIMS2-203ENST00000409254 NCLNQ969V3 563 aa12.11□□□□□ -0.47
LIMS2-203ENST00000409254 C8orf44Q96CB5 159 aa12.11□□□□□ -0.47
LIMS2-203ENST00000409254 RNF31Q96EP0 1072 aa12.11□□□□□ -0.47
LIMS2-203ENST00000409254 GIMAP5Q96F15 307 aa12.11□□□□□ -0.47
LIMS2-203ENST00000409254 VSTM2LQ96N03 204 aa12.11□□□□□ -0.47
LIMS2-203ENST00000409254 CPPED1Q9BRF8 314 aaPredicted RBP12.11□□□□□ -0.47
LIMS2-203ENST00000409254 GPATCH1Q9BRR8 931 aaKnown RBP12.11□□□□□ -0.47
LIMS2-203ENST00000409254 LMF2Q9BU23 707 aaKnown RBP12.11□□□□□ -0.47
LIMS2-203ENST00000409254 ACTRT3Q9BYD9 372 aa12.11□□□□□ -0.47
LIMS2-203ENST00000409254 OR8D2Q9GZM6 311 aa12.11□□□□□ -0.47
LIMS2-203ENST00000409254 TPT1P8Q9HAU6 139 aa12.11□□□□□ -0.47
LIMS2-203ENST00000409254 ATP13A2Q9NQ11 1180 aa12.11□□□□□ -0.47
LIMS2-203ENST00000409254 ARL8BQ9NVJ2 186 aa12.11□□□□□ -0.47
LIMS2-203ENST00000409254 GPATCH2Q9NW75 528 aa12.11□□□□□ -0.47
LIMS2-203ENST00000409254 ABCD2Q9UBJ2 740 aa12.11□□□□□ -0.47
LIMS2-203ENST00000409254 FAF1Q9UNN5 650 aaPredicted RBP12.11□□□□□ -0.47
LIMS2-203ENST00000409254 ERVK-11Q9UQG0 969 aa12.11□□□□□ -0.47
LIMS2-203ENST00000409254 SNX8Q9Y5X2 465 aa12.11□□□□□ -0.47
LIMS2-203ENST00000409254 MRPS18BQ9Y676 258 aaKnown RBP12.11□□□□□ -0.47
LIMS2-203ENST00000409254 FRG2CA6NGY1 282 aa12.1□□□□□ -0.47
LIMS2-203ENST00000409254 CLIC1O00299 241 aa12.1□□□□□ -0.47
LIMS2-203ENST00000409254 TO15178 435 aa12.1□□□□□ -0.47
LIMS2-203ENST00000409254 ZFAND5O76080 213 aa12.1□□□□□ -0.47
LIMS2-203ENST00000409254 UBOX5O94941 541 aa12.1□□□□□ -0.47
LIMS2-203ENST00000409254 CLPSP04118 112 aa12.1□□□□□ -0.47
LIMS2-203ENST00000409254 CHI3L1P36222 383 aaPredicted RBP12.1□□□□□ -0.47
LIMS2-203ENST00000409254 CDKN2CP42773 168 aa12.1□□□□□ -0.47
LIMS2-203ENST00000409254 PPICP45877 212 aa12.1□□□□□ -0.47
LIMS2-203ENST00000409254 KHKP50053 298 aa12.1□□□□□ -0.47
LIMS2-203ENST00000409254 MRPS35P82673 323 aaKnown RBP12.1□□□□□ -0.47
LIMS2-203ENST00000409254 TP53BP2Q13625 1128 aa12.1□□□□□ -0.47
LIMS2-203ENST00000409254 GNA13Q14344 377 aa12.1□□□□□ -0.47
LIMS2-203ENST00000409254 BTBD16Q32M84 506 aa12.1□□□□□ -0.47
LIMS2-203ENST00000409254 DNAL1Q4LDG9 190 aa12.1□□□□□ -0.47
LIMS2-203ENST00000409254 TRMT12Q53H54 448 aaKnown RBP12.1□□□□□ -0.47
LIMS2-203ENST00000409254 RUNDC3AQ59EK9 446 aa12.1□□□□□ -0.47
LIMS2-203ENST00000409254 PRAMEF8Q5VWM4 474 aa12.1□□□□□ -0.47
LIMS2-203ENST00000409254 PRAMEF7Q5VXH5 474 aa12.1□□□□□ -0.47
LIMS2-203ENST00000409254 FAM180BQ6P0A1 224 aa12.1□□□□□ -0.47
LIMS2-203ENST00000409254 FAM111BQ6SJ93 734 aa12.1□□□□□ -0.47
LIMS2-203ENST00000409254 CCDC81Q6ZN84 652 aa12.1□□□□□ -0.47
LIMS2-203ENST00000409254 DGAT2L6Q6ZPD8 337 aa12.1□□□□□ -0.47
LIMS2-203ENST00000409254 ZNF621Q6ZSS3 439 aa12.1□□□□□ -0.47
LIMS2-203ENST00000409254 SLC30A8Q8IWU4 369 aa12.1□□□□□ -0.47
LIMS2-203ENST00000409254 SLC5A8Q8N695 610 aa12.1□□□□□ -0.47
LIMS2-203ENST00000409254 ZNF441Q8N8Z8 693 aa12.1□□□□□ -0.47
LIMS2-203ENST00000409254 OR52R1Q8NGF1 315 aa12.1□□□□□ -0.47
LIMS2-203ENST00000409254 NUDT8Q8WV74 236 aa12.1□□□□□ -0.47
LIMS2-203ENST00000409254 ZCCHC14Q8WYQ9 949 aaKnown RBP12.1□□□□□ -0.47
LIMS2-203ENST00000409254 KAT2AQ92830 837 aa12.1□□□□□ -0.47
LIMS2-203ENST00000409254 PMM1Q92871 262 aa12.1□□□□□ -0.47
LIMS2-203ENST00000409254 PPWD1Q96BP3 646 aaKnown RBP12.1□□□□□ -0.47
LIMS2-203ENST00000409254 HSPBAP1Q96EW2 488 aa12.1□□□□□ -0.47
LIMS2-203ENST00000409254 SLC35G5Q96KT7 338 aa12.1□□□□□ -0.47
LIMS2-203ENST00000409254 INPP5KQ9BT40 448 aa12.1□□□□□ -0.47
LIMS2-203ENST00000409254 WWTR1Q9GZV5 400 aa12.1□□□□□ -0.47
LIMS2-203ENST00000409254 LHPPQ9H008 270 aa12.1□□□□□ -0.47
LIMS2-203ENST00000409254 SPAG4Q9NPE6 437 aa12.1□□□□□ -0.47
LIMS2-203ENST00000409254 SLC25A37Q9NYZ2 338 aa12.1□□□□□ -0.47
LIMS2-203ENST00000409254 VAPAQ9P0L0 249 aa12.1□□□□□ -0.47
LIMS2-203ENST00000409254 TEKT2Q9UIF3 430 aa12.1□□□□□ -0.47
LIMS2-203ENST00000409254 EML6Q6ZMW3 1958 aa12.09□□□□□ -0.47
LIMS2-203ENST00000409254 CDC14CA4D256 554 aa12.09□□□□□ -0.47
LIMS2-203ENST00000409254 AIM2O14862 343 aa12.09□□□□□ -0.47
LIMS2-203ENST00000409254 NKX2-2O95096 273 aa12.09□□□□□ -0.47
LIMS2-203ENST00000409254 CBX6O95503 412 aa12.09□□□□□ -0.47
LIMS2-203ENST00000409254 CPSF4O95639 269 aaKnown RBP12.09□□□□□ -0.47
LIMS2-203ENST00000409254 HMGN2P05204 90 aaKnown RBP12.09□□□□□ -0.47
LIMS2-203ENST00000409254 T-ENOLP0DO92 83 aa12.09□□□□□ -0.47
LIMS2-203ENST00000409254 NAGAP17050 411 aa12.09□□□□□ -0.47
LIMS2-203ENST00000409254 DRD5P21918 477 aa12.09□□□□□ -0.47
LIMS2-203ENST00000409254 SSTR4P31391 388 aa12.09□□□□□ -0.47
LIMS2-203ENST00000409254 MAN2A2P49641 1150 aa12.09□□□□□ -0.47
LIMS2-203ENST00000409254 TMED10P49755 219 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms