RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 TMEM150AQ86TG1 271 aa7.87□□□□□ -1.15
SNX13-201ENST00000409076 CPOQ8IVL8 374 aa7.87□□□□□ -1.15
SNX13-201ENST00000409076 KRT78Q8N1N4 520 aa7.87□□□□□ -1.15
SNX13-201ENST00000409076 OR9A2Q8NGT5 310 aa7.87□□□□□ -1.15
SNX13-201ENST00000409076 CXorf40AQ8TE69 158 aa7.87□□□□□ -1.15
SNX13-201ENST00000409076 CHAC2Q8WUX2 184 aa7.87□□□□□ -1.15
SNX13-201ENST00000409076 SPRYD4Q8WW59 207 aaPredicted RBP7.87□□□□□ -1.15
SNX13-201ENST00000409076 FCGR1BQ92637 280 aa7.87□□□□□ -1.15
SNX13-201ENST00000409076 NUS1Q96E22 293 aa7.87□□□□□ -1.15
SNX13-201ENST00000409076 VMP1Q96GC9 406 aa7.87□□□□□ -1.15
SNX13-201ENST00000409076 SAMD8Q96LT4 415 aa7.87□□□□□ -1.15
SNX13-201ENST00000409076 TREX2Q9BQ50 279 aaPredicted RBP7.87□□□□□ -1.15
SNX13-201ENST00000409076 SLC25A18Q9H1K4 315 aa7.87□□□□□ -1.15
SNX13-201ENST00000409076 CPNE5Q9HCH3 593 aa7.87□□□□□ -1.15
SNX13-201ENST00000409076 SLC23A2Q9UGH3 650 aa7.87□□□□□ -1.15
SNX13-201ENST00000409076 IGLON5A6NGN9 336 aa7.87□□□□□ -1.15
SNX13-201ENST00000409076 FFAR1O14842 300 aa7.87□□□□□ -1.15
SNX13-201ENST00000409076 CAPN5O15484 640 aaPredicted RBP7.87□□□□□ -1.15
SNX13-201ENST00000409076 SCN2BO60939 215 aa7.87□□□□□ -1.15
SNX13-201ENST00000409076 PRKAR1AP10644 381 aa7.87□□□□□ -1.15
SNX13-201ENST00000409076 CLUP10909 449 aa7.87□□□□□ -1.15
SNX13-201ENST00000409076 SYN1P17600 705 aa7.87□□□□□ -1.15
SNX13-201ENST00000409076 NTSP30990 170 aa7.87□□□□□ -1.15
SNX13-201ENST00000409076 IFNA8P32881 189 aa7.87□□□□□ -1.15
SNX13-201ENST00000409076 CTNNB1P35222 781 aa7.87□□□□□ -1.15
SNX13-201ENST00000409076 PSMB10P40306 273 aa7.87□□□□□ -1.15
SNX13-201ENST00000409076 HTR3AP46098 478 aa7.87□□□□□ -1.15
SNX13-201ENST00000409076 MAP2K3P46734 347 aa7.87□□□□□ -1.15
SNX13-201ENST00000409076 ARHGDIBP52566 201 aa7.87□□□□□ -1.15
SNX13-201ENST00000409076 PNLIPRP1P54315 467 aa7.87□□□□□ -1.15
SNX13-201ENST00000409076 BTN3A2P78410 334 aa7.87□□□□□ -1.15
SNX13-201ENST00000409076 MLIPQ5VWP3 458 aa7.87□□□□□ -1.15
SNX13-201ENST00000409076 TMEM215Q68D42 235 aa7.87□□□□□ -1.15
SNX13-201ENST00000409076 CDC73Q6P1J9 531 aa7.87□□□□□ -1.15
SNX13-201ENST00000409076 GET4Q7L5D6 327 aaPredicted RBP7.87□□□□□ -1.15
SNX13-201ENST00000409076 TSEN54Q7Z6J9 526 aaKnown RBP7.87□□□□□ -1.15
SNX13-201ENST00000409076 IL17RDQ8NFM7 739 aa7.87□□□□□ -1.15
SNX13-201ENST00000409076 VN1R2Q8NFZ6 395 aa7.87□□□□□ -1.15
SNX13-201ENST00000409076 OR9A1PQ8NGU1 263 aa7.87□□□□□ -1.15
SNX13-201ENST00000409076 ECHDC3Q96DC8 303 aa7.87□□□□□ -1.15
SNX13-201ENST00000409076 MAGEB10Q96LZ2 347 aaPredicted RBP7.87□□□□□ -1.15
SNX13-201ENST00000409076 DPH7Q9BTV6 452 aa7.87□□□□□ -1.15
SNX13-201ENST00000409076 IFT27Q9BW83 186 aa7.87□□□□□ -1.15
SNX13-201ENST00000409076 LGR4Q9BXB1 951 aa7.87□□□□□ -1.15
SNX13-201ENST00000409076 FBXO8Q9NRD0 319 aa7.87□□□□□ -1.15
SNX13-201ENST00000409076 ENAMQ9NRM1 1142 aa7.87□□□□□ -1.15
SNX13-201ENST00000409076 NUDT15Q9NV35 164 aa7.87□□□□□ -1.15
SNX13-201ENST00000409076 RPL36Q9Y3U8 105 aaKnown RBP7.87□□□□□ -1.15
SNX13-201ENST00000409076 CIB4A0PJX0 185 aa7.87□□□□□ -1.15
SNX13-201ENST00000409076 INMT-MINDY4F8WBC2 141 aa7.87□□□□□ -1.15
SNX13-201ENST00000409076 TMPRSS11DO60235 418 aa7.87□□□□□ -1.15
SNX13-201ENST00000409076 FURINP09958 794 aa7.87□□□□□ -1.15
SNX13-201ENST00000409076 C6P13671 934 aa7.87□□□□□ -1.15
SNX13-201ENST00000409076 ELAVL4P26378 380 aaKnown RBP7.87□□□□□ -1.15
SNX13-201ENST00000409076 PCGF2P35227 344 aa7.87□□□□□ -1.15
SNX13-201ENST00000409076 ZNF81P51508 661 aa7.87□□□□□ -1.15
SNX13-201ENST00000409076 CCR6P51684 374 aa7.87□□□□□ -1.15
SNX13-201ENST00000409076 VSX2P58304 361 aaPredicted RBP7.87□□□□□ -1.15
SNX13-201ENST00000409076 TAP2Q03519 686 aa7.87□□□□□ -1.15
SNX13-201ENST00000409076 CHRNEQ04844 493 aa7.87□□□□□ -1.15
SNX13-201ENST00000409076 SQSTM1Q13501 440 aa7.87□□□□□ -1.15
SNX13-201ENST00000409076 TRIM71Q2Q1W2 868 aaKnown RBP7.87□□□□□ -1.15
SNX13-201ENST00000409076 SMUG1Q53HV7 270 aa7.87□□□□□ -1.15
SNX13-201ENST00000409076 LIPJQ5W064 366 aa7.87□□□□□ -1.15
SNX13-201ENST00000409076 SLCO4C1Q6ZQN7 724 aa7.87□□□□□ -1.15
SNX13-201ENST00000409076 NKAIN4Q8IVV8 208 aa7.87□□□□□ -1.15
SNX13-201ENST00000409076 ADAMTS15Q8TE58 950 aa7.87□□□□□ -1.15
SNX13-201ENST00000409076 OTUB2Q96DC9 234 aa7.87□□□□□ -1.15
SNX13-201ENST00000409076 LMLNQ96KR4 655 aa7.87□□□□□ -1.15
SNX13-201ENST00000409076 GPA33Q99795 319 aa7.87□□□□□ -1.15
SNX13-201ENST00000409076 MND1Q9BWT6 205 aa7.87□□□□□ -1.15
SNX13-201ENST00000409076 MED28Q9H204 178 aa7.87□□□□□ -1.15
SNX13-201ENST00000409076 ABCG5Q9H222 651 aa7.87□□□□□ -1.15
SNX13-201ENST00000409076 ERVW-1Q9UQF0 538 aa7.87□□□□□ -1.15
SNX13-201ENST00000409076 PSME4Q14997 1843 aa7.87□□□□□ -1.15
SNX13-201ENST00000409076 TRAV27A0A087WT01 109 aa7.86□□□□□ -1.15
SNX13-201ENST00000409076 A0A0G2JMP0 313 aa7.86□□□□□ -1.15
SNX13-201ENST00000409076 A0A0X1KG70 313 aa7.86□□□□□ -1.15
SNX13-201ENST00000409076 PLPP1O14494 284 aa7.86□□□□□ -1.15
SNX13-201ENST00000409076 SIGLEC5O15389 551 aa7.86□□□□□ -1.15
SNX13-201ENST00000409076 GPR37L1O60883 481 aa7.86□□□□□ -1.15
SNX13-201ENST00000409076 PTTG1O95997 202 aa7.86□□□□□ -1.15
SNX13-201ENST00000409076 SOD2P04179 222 aa7.86□□□□□ -1.15
SNX13-201ENST00000409076 UCHL1P09936 223 aa7.86□□□□□ -1.15
SNX13-201ENST00000409076 ZDHHC11BP0C7U3 371 aa7.86□□□□□ -1.15
SNX13-201ENST00000409076 EPCAMP16422 314 aa7.86□□□□□ -1.15
SNX13-201ENST00000409076 RPS27P42677 84 aaKnown RBP7.86□□□□□ -1.15
SNX13-201ENST00000409076 KIR2DL3P43628 341 aa7.86□□□□□ -1.15
SNX13-201ENST00000409076 SIGLEC14Q08ET2 396 aa7.86□□□□□ -1.15
SNX13-201ENST00000409076 DEFB110Q30KQ9 67 aa7.86□□□□□ -1.15
SNX13-201ENST00000409076 NDUFAF5Q5TEU4 345 aa7.86□□□□□ -1.15
SNX13-201ENST00000409076 GRHL2Q6ISB3 625 aa7.86□□□□□ -1.15
SNX13-201ENST00000409076 METTL2BQ6P1Q9 378 aaKnown RBP7.86□□□□□ -1.15
SNX13-201ENST00000409076 BHLHB9Q6PI77 547 aa7.86□□□□□ -1.15
SNX13-201ENST00000409076 ZNF367Q7RTV3 350 aa7.86□□□□□ -1.15
SNX13-201ENST00000409076 PRICKLE2Q7Z3G6 844 aa7.86□□□□□ -1.15
SNX13-201ENST00000409076 OR4M2Q8NGB6 313 aa7.86□□□□□ -1.15
SNX13-201ENST00000409076 IRF7Q92985 503 aa7.86□□□□□ -1.15
SNX13-201ENST00000409076 PDLIM5Q96HC4 596 aaKnown RBP7.86□□□□□ -1.15
SNX13-201ENST00000409076 NARS2Q96I59 477 aaKnown RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms