RNA–Protein interactions for RNA: ENST00000409050.1

SCN1A-203, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 5,946 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-203ENST00000409050 ZNF597Q96LX8 424 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 CLEC4EQ9ULY5 219 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 NAALAD2Q9Y3Q0 740 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 ATG4BQ9Y4P1 393 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 LOC102725191A0A1B0GVB3 256 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 A6NHS1 94 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 IQCF5A8MTL0 148 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 SOX1O00570 391 aaPredicted RBP5.81□□□□□ -1.48
SCN1A-203ENST00000409050 DUX1O43812 170 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 PTHP01270 115 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 CKMT1AP12532 417 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 CD6P30203 668 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 RGS6P49758 472 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 GDI2P50395 445 aaKnown RBP5.81□□□□□ -1.48
SCN1A-203ENST00000409050 CDH15P55291 814 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 CLDN10P78369 228 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 FOXK1P85037 733 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 OGDHQ02218 1023 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 DLX2Q07687 328 aaPredicted RBP5.81□□□□□ -1.48
SCN1A-203ENST00000409050 MLLT11Q13015 90 aaPredicted RBP5.81□□□□□ -1.48
SCN1A-203ENST00000409050 LRP8Q14114 963 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 PON2Q15165 354 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 UAP1L1Q3KQV9 507 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 HENMT1Q5T8I9 393 aaKnown RBP5.81□□□□□ -1.48
SCN1A-203ENST00000409050 PLAG1Q6DJT9 500 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 OR4C11Q6IEV9 310 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 LPCAT3Q6P1A2 487 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 NOXA1Q86UR1 476 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 ZBTB46Q86UZ6 589 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 TMPRSS12Q86WS5 348 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 CACUL1Q86Y37 369 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 EGFL6Q8IUX8 553 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 OR6V1Q8N148 313 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 BORCS6Q96GS4 357 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 EIF5A2Q9GZV4 153 aaKnown RBP5.81□□□□□ -1.48
SCN1A-203ENST00000409050 ANKRD19PQ9H560 264 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 NSUN3Q9H649 340 aaKnown RBP5.81□□□□□ -1.48
SCN1A-203ENST00000409050 C2orf42Q9NWW7 574 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 SAGE1Q9NXZ1 904 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 B4GALT6Q9UBX8 382 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 MTMR11A4FU01 709 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 J3QRK9 145 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 VILLO15195 856 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 HCRTR2O43614 444 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 SLC34A2O95436 690 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 EDN1P05305 212 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 CPT2P23786 658 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 RRAS2P62070 204 aaPredicted RBP5.81□□□□□ -1.48
SCN1A-203ENST00000409050 AAK1Q2M2I8 961 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 CDNFQ49AH0 187 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 TMEM225Q6GV28 225 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 TLDC1Q6P9B6 456 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 TTLL10Q6ZVT0 673 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 TBC1D20Q96BZ9 403 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 CDCA3Q99618 268 aaPredicted RBP5.81□□□□□ -1.48
SCN1A-203ENST00000409050 GSKIPQ9P0R6 139 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 PPP4R1LQ9P1A2 415 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 GPR160Q9UJ42 338 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 PCDHGA8Q9Y5G5 932 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 LRRC37A3O60309 1634 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 PARP4Q9UKK3 1724 aaKnown RBP5.81□□□□□ -1.48
SCN1A-203ENST00000409050 HHLA1C9JL84 531 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 TSTD3H0UI37 97 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 SLC31A1O15431 190 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 SULT1B1O43704 296 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 PIAS1O75925 651 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 TAL1P17542 331 aaPredicted RBP5.81□□□□□ -1.48
SCN1A-203ENST00000409050 GGT2P36268 569 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 NUDT6P53370 316 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 TAS2R46P59540 309 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 ERVK-16P61578 105 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 SELENOWP63302 87 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 GALK2Q01415 458 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 SLAMF1Q13291 335 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 MSMO1Q15800 293 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 PRAMEF19Q5SWL8 479 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 KCNIP4Q6PIL6 250 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 XKR5Q6UX68 686 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 TRIM46Q7Z4K8 759 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 TMEM150AQ86TG1 271 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 RDH10Q8IZV5 341 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 POGLUT1Q8NBL1 392 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 B3GNT7Q8NFL0 401 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 OR56B2PQ8NGI1 322 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 OR5AK2Q8NH90 309 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 RSC1A1Q92681 617 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 ECHDC3Q96DC8 303 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 ELP4Q96EB1 424 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 BARD1Q99728 777 aaKnown RBP5.81□□□□□ -1.48
SCN1A-203ENST00000409050 SMOQ99835 787 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 SEMA4CQ9C0C4 833 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 ERVK-18Q9QC07 812 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 CACNG2Q9Y698 323 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 RNF215Q9Y6U7 377 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 TCRBV7S3A2A0A539 114 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 KIAA0355O15063 1070 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 TPST2O60704 377 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 ADAMTS4O75173 837 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 CLDN7O95471 211 aa5.81□□□□□ -1.48
SCN1A-203ENST00000409050 ASGR2P07307 311 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms