RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 KIR3DL1P43629 444 aa12.21□□□□□ -0.45
SDF4-203ENST00000403997 MASP1P48740 699 aa12.21□□□□□ -0.45
SDF4-203ENST00000403997 TRPC1P48995 793 aa12.21□□□□□ -0.45
SDF4-203ENST00000403997 NUP107P57740 925 aa12.21□□□□□ -0.45
SDF4-203ENST00000403997 MRPS35P82673 323 aaKnown RBP12.21□□□□□ -0.45
SDF4-203ENST00000403997 SLC18A2Q05940 514 aa12.21□□□□□ -0.45
SDF4-203ENST00000403997 C2orf80Q0P641 193 aa12.21□□□□□ -0.45
SDF4-203ENST00000403997 DUSP8Q13202 625 aa12.21□□□□□ -0.45
SDF4-203ENST00000403997 LIPMQ5VYY2 423 aa12.21□□□□□ -0.45
SDF4-203ENST00000403997 GALNT18Q6P9A2 607 aa12.21□□□□□ -0.45
SDF4-203ENST00000403997 ACAD11Q709F0 780 aa12.21□□□□□ -0.45
SDF4-203ENST00000403997 PACS2Q86VP3 889 aa12.21□□□□□ -0.45
SDF4-203ENST00000403997 TICAM1Q8IUC6 712 aa12.21□□□□□ -0.45
SDF4-203ENST00000403997 C10orf107Q8IVU9 208 aa12.21□□□□□ -0.45
SDF4-203ENST00000403997 LIX1Q8N485 282 aa12.21□□□□□ -0.45
SDF4-203ENST00000403997 OR10Q1Q8NGQ4 319 aa12.21□□□□□ -0.45
SDF4-203ENST00000403997 CDC26Q8NHZ8 85 aa12.21□□□□□ -0.45
SDF4-203ENST00000403997 ASB5Q8WWX0 329 aa12.21□□□□□ -0.45
SDF4-203ENST00000403997 KAT2AQ92830 837 aa12.21□□□□□ -0.45
SDF4-203ENST00000403997 OMA1Q96E52 524 aa12.21□□□□□ -0.45
SDF4-203ENST00000403997 HSPBAP1Q96EW2 488 aa12.21□□□□□ -0.45
SDF4-203ENST00000403997 C11orf24Q96F05 449 aaPredicted RBP12.21□□□□□ -0.45
SDF4-203ENST00000403997 RILPQ96NA2 401 aa12.21□□□□□ -0.45
SDF4-203ENST00000403997 SECISBP2Q96T21 854 aaKnown RBP12.21□□□□□ -0.45
SDF4-203ENST00000403997 ANGPTL4Q9BY76 406 aa12.21□□□□□ -0.45
SDF4-203ENST00000403997 SLC6A15Q9H2J7 730 aa12.21□□□□□ -0.45
SDF4-203ENST00000403997 ANKRA2Q9H9E1 313 aa12.21□□□□□ -0.45
SDF4-203ENST00000403997 ACKR4Q9NPB9 350 aa12.21□□□□□ -0.45
SDF4-203ENST00000403997 RRAGDQ9NQL2 400 aaPredicted RBP12.21□□□□□ -0.45
SDF4-203ENST00000403997 SIRT5Q9NXA8 310 aa12.21□□□□□ -0.45
SDF4-203ENST00000403997 QPCTLQ9NXS2 382 aa12.21□□□□□ -0.45
SDF4-203ENST00000403997 MID2Q9UJV3 735 aa12.21□□□□□ -0.45
SDF4-203ENST00000403997 RNF6Q9Y252 685 aa12.21□□□□□ -0.45
SDF4-203ENST00000403997 ACOX3O15254 700 aa12.2□□□□□ -0.46
SDF4-203ENST00000403997 PPM1BO75688 479 aa12.2□□□□□ -0.46
SDF4-203ENST00000403997 UROSP10746 265 aa12.2□□□□□ -0.46
SDF4-203ENST00000403997 NAGAP17050 411 aa12.2□□□□□ -0.46
SDF4-203ENST00000403997 ENDOUP21128 410 aaKnown RBP12.2□□□□□ -0.46
SDF4-203ENST00000403997 DRD5P21918 477 aa12.2□□□□□ -0.46
SDF4-203ENST00000403997 CHRNB4P30926 498 aa12.2□□□□□ -0.46
SDF4-203ENST00000403997 MPIP34949 423 aa12.2□□□□□ -0.46
SDF4-203ENST00000403997 PTGER4P35408 488 aa12.2□□□□□ -0.46
SDF4-203ENST00000403997 PPICP45877 212 aa12.2□□□□□ -0.46
SDF4-203ENST00000403997 GSTM5P46439 218 aa12.2□□□□□ -0.46
SDF4-203ENST00000403997 EMDP50402 254 aa12.2□□□□□ -0.46
SDF4-203ENST00000403997 RIPPLY3P57055 190 aa12.2□□□□□ -0.46
SDF4-203ENST00000403997 DCAF7P61962 342 aa12.2□□□□□ -0.46
SDF4-203ENST00000403997 VSNL1P62760 191 aa12.2□□□□□ -0.46
SDF4-203ENST00000403997 IFFO1Q0D2I5 559 aa12.2□□□□□ -0.46
SDF4-203ENST00000403997 ZNF763Q0D2J5 394 aa12.2□□□□□ -0.46
SDF4-203ENST00000403997 ERCC6LQ2NKX8 1250 aa12.2□□□□□ -0.46
SDF4-203ENST00000403997 NUP54Q7Z3B4 507 aa12.2□□□□□ -0.46
SDF4-203ENST00000403997 TRIM46Q7Z4K8 759 aa12.2□□□□□ -0.46
SDF4-203ENST00000403997 CCDC71Q8IV32 467 aaPredicted RBP12.2□□□□□ -0.46
SDF4-203ENST00000403997 OR9A2Q8NGT5 310 aa12.2□□□□□ -0.46
SDF4-203ENST00000403997 LILRB4Q8NHJ6 448 aa12.2□□□□□ -0.46
SDF4-203ENST00000403997 NEIL3Q8TAT5 605 aa12.2□□□□□ -0.46
SDF4-203ENST00000403997 ZNF675Q8TD23 568 aa12.2□□□□□ -0.46
SDF4-203ENST00000403997 GNRHR2Q96P88 292 aa12.2□□□□□ -0.46
SDF4-203ENST00000403997 BBS4Q96RK4 519 aa12.2□□□□□ -0.46
SDF4-203ENST00000403997 IQCGQ9H095 443 aaKnown RBP12.2□□□□□ -0.46
SDF4-203ENST00000403997 METTL7AQ9H8H3 244 aa12.2□□□□□ -0.46
SDF4-203ENST00000403997 TNFRSF12AQ9NP84 129 aa12.2□□□□□ -0.46
SDF4-203ENST00000403997 EHD3Q9NZN3 535 aa12.2□□□□□ -0.46
SDF4-203ENST00000403997 SPRR3Q9UBC9 169 aa12.2□□□□□ -0.46
SDF4-203ENST00000403997 POLR3HQ9Y535 204 aaPredicted RBP12.2□□□□□ -0.46
SDF4-203ENST00000403997 FAM90A27PA6NNH2 459 aa12.19□□□□□ -0.46
SDF4-203ENST00000403997 WDR1O75083 606 aa12.19□□□□□ -0.46
SDF4-203ENST00000403997 DDCP20711 480 aa12.19□□□□□ -0.46
SDF4-203ENST00000403997 PLCXD2Q0VAA5 305 aa12.19□□□□□ -0.46
SDF4-203ENST00000403997 TOMM20Q15388 145 aa12.19□□□□□ -0.46
SDF4-203ENST00000403997 ZNF628Q5EBL2 1059 aa12.19□□□□□ -0.46
SDF4-203ENST00000403997 CLEC6AQ6EIG7 209 aa12.19□□□□□ -0.46
SDF4-203ENST00000403997 DESI1Q6ICB0 168 aa12.19□□□□□ -0.46
SDF4-203ENST00000403997 B3GNT6Q6ZMB0 384 aa12.19□□□□□ -0.46
SDF4-203ENST00000403997 GDF7Q7Z4P5 450 aa12.19□□□□□ -0.46
SDF4-203ENST00000403997 FAM9CQ8IZT9 166 aa12.19□□□□□ -0.46
SDF4-203ENST00000403997 RIBC1Q8N443 379 aaPredicted RBP12.19□□□□□ -0.46
SDF4-203ENST00000403997 FAM76AQ8TAV0 307 aa12.19□□□□□ -0.46
SDF4-203ENST00000403997 ERP27Q96DN0 273 aa12.19□□□□□ -0.46
SDF4-203ENST00000403997 NODALQ96S42 347 aa12.19□□□□□ -0.46
SDF4-203ENST00000403997 TTYH2Q9BSA4 534 aa12.19□□□□□ -0.46
SDF4-203ENST00000403997 UCK2Q9BZX2 261 aa12.19□□□□□ -0.46
SDF4-203ENST00000403997 KCNJ16Q9NPI9 418 aa12.19□□□□□ -0.46
SDF4-203ENST00000403997 MIEF1Q9NQG6 463 aa12.19□□□□□ -0.46
SDF4-203ENST00000403997 SENP1Q9P0U3 644 aa12.19□□□□□ -0.46
SDF4-203ENST00000403997 GPR55Q9Y2T6 319 aaPredicted RBP12.19□□□□□ -0.46
SDF4-203ENST00000403997 FREM3P0C091 2139 aa12.19□□□□□ -0.46
SDF4-203ENST00000403997 C2CD3Q4AC94 2353 aa12.18□□□□□ -0.46
SDF4-203ENST00000403997 C15orf38-AP3S2A0A0A6YYH1 394 aa12.18□□□□□ -0.46
SDF4-203ENST00000403997 C2orf72A6NCS6 295 aa12.18□□□□□ -0.46
SDF4-203ENST00000403997 FRG2CA6NGY1 282 aa12.18□□□□□ -0.46
SDF4-203ENST00000403997 SLC28A1O00337 649 aa12.18□□□□□ -0.46
SDF4-203ENST00000403997 GNB5O14775 395 aa12.18□□□□□ -0.46
SDF4-203ENST00000403997 TO15178 435 aa12.18□□□□□ -0.46
SDF4-203ENST00000403997 TRIM13O60858 407 aa12.18□□□□□ -0.46
SDF4-203ENST00000403997 UGT2B11O75310 529 aa12.18□□□□□ -0.46
SDF4-203ENST00000403997 SEC22BO75396 215 aa12.18□□□□□ -0.46
SDF4-203ENST00000403997 NME6O75414 186 aaPredicted RBP12.18□□□□□ -0.46
SDF4-203ENST00000403997 REM1O75628 298 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms