RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 FAM92BQ6ZTR7 304 aa11.95□□□□□ -0.5
PPP4R1-202ENST00000400555 GALNT12Q8IXK2 581 aa11.95□□□□□ -0.5
PPP4R1-202ENST00000400555 KLHDC8AQ8IYD2 350 aa11.95□□□□□ -0.5
PPP4R1-202ENST00000400555 PGBD3Q8N328 593 aa11.95□□□□□ -0.5
PPP4R1-202ENST00000400555 PDXPQ96GD0 296 aa11.95□□□□□ -0.5
PPP4R1-202ENST00000400555 ZNF354BQ96LW1 612 aa11.95□□□□□ -0.5
PPP4R1-202ENST00000400555 BARHL1Q9BZE3 327 aa11.95□□□□□ -0.5
PPP4R1-202ENST00000400555 WDR26Q9H7D7 661 aa11.95□□□□□ -0.5
PPP4R1-202ENST00000400555 SP140LQ9H930 580 aa11.95□□□□□ -0.5
PPP4R1-202ENST00000400555 NEUROD4Q9HD90 331 aa11.95□□□□□ -0.5
PPP4R1-202ENST00000400555 PLSCR3Q9NRY6 295 aa11.95□□□□□ -0.5
PPP4R1-202ENST00000400555 KLHL28Q9NXS3 571 aa11.95□□□□□ -0.5
PPP4R1-202ENST00000400555 MAT2BQ9NZL9 334 aa11.95□□□□□ -0.5
PPP4R1-202ENST00000400555 SEC14L4Q9UDX3 406 aa11.95□□□□□ -0.5
PPP4R1-202ENST00000400555 FTSJ1Q9UET6 329 aa11.95□□□□□ -0.5
PPP4R1-202ENST00000400555 CA5BQ9Y2D0 317 aa11.95□□□□□ -0.5
PPP4R1-202ENST00000400555 DOCK9Q9BZ29 2069 aa11.95□□□□□ -0.5
PPP4R1-202ENST00000400555 H3BSH0 61 aa11.95□□□□□ -0.5
PPP4R1-202ENST00000400555 PTTG1O95997 202 aa11.95□□□□□ -0.5
PPP4R1-202ENST00000400555 FUT1P19526 365 aa11.95□□□□□ -0.5
PPP4R1-202ENST00000400555 PAICSP22234 425 aaKnown RBP11.95□□□□□ -0.5
PPP4R1-202ENST00000400555 UGT2B10P36537 528 aa11.95□□□□□ -0.5
PPP4R1-202ENST00000400555 IL12RB1P42701 662 aa11.95□□□□□ -0.5
PPP4R1-202ENST00000400555 SIM1P81133 766 aaPredicted RBP11.95□□□□□ -0.5
PPP4R1-202ENST00000400555 ELAVL3Q14576 367 aaKnown RBP11.95□□□□□ -0.5
PPP4R1-202ENST00000400555 IDNKQ5T6J7 187 aa11.95□□□□□ -0.5
PPP4R1-202ENST00000400555 TUBA3EQ6PEY2 450 aa11.95□□□□□ -0.5
PPP4R1-202ENST00000400555 IL20RBQ6UXL0 311 aa11.95□□□□□ -0.5
PPP4R1-202ENST00000400555 COMTD1Q86VU5 262 aa11.95□□□□□ -0.5
PPP4R1-202ENST00000400555 LAS2Q8IYD9 372 aa11.95□□□□□ -0.5
PPP4R1-202ENST00000400555 CXorf40BQ96DE9 158 aa11.95□□□□□ -0.5
PPP4R1-202ENST00000400555 RNF31Q96EP0 1072 aa11.95□□□□□ -0.5
PPP4R1-202ENST00000400555 C11orf24Q96F05 449 aaPredicted RBP11.95□□□□□ -0.5
PPP4R1-202ENST00000400555 ZNF514Q96K75 400 aaPredicted RBP11.95□□□□□ -0.5
PPP4R1-202ENST00000400555 LMLNQ96KR4 655 aa11.95□□□□□ -0.5
PPP4R1-202ENST00000400555 GPA33Q99795 319 aa11.95□□□□□ -0.5
PPP4R1-202ENST00000400555 TMEM246Q9BRR3 403 aa11.95□□□□□ -0.5
PPP4R1-202ENST00000400555 MS4A8Q9BY19 250 aa11.95□□□□□ -0.5
PPP4R1-202ENST00000400555 STUB1Q9UNE7 303 aa11.95□□□□□ -0.5
PPP4R1-202ENST00000400555 PLXNA4Q9HCM2 1894 aa11.95□□□□□ -0.5
PPP4R1-202ENST00000400555 OR6C70A6NIJ9 312 aa11.95□□□□□ -0.5
PPP4R1-202ENST00000400555 CPNE3O75131 537 aaKnown RBP11.95□□□□□ -0.5
PPP4R1-202ENST00000400555 MOSPD3O75425 235 aa11.95□□□□□ -0.5
PPP4R1-202ENST00000400555 SLC2A10O95528 541 aa11.95□□□□□ -0.5
PPP4R1-202ENST00000400555 ACVR2AP27037 513 aa11.95□□□□□ -0.5
PPP4R1-202ENST00000400555 P2RY2P41231 377 aa11.95□□□□□ -0.5
PPP4R1-202ENST00000400555 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.95□□□□□ -0.5
PPP4R1-202ENST00000400555 IRF3Q14653 427 aa11.95□□□□□ -0.5
PPP4R1-202ENST00000400555 QPRTQ15274 297 aa11.95□□□□□ -0.5
PPP4R1-202ENST00000400555 HNRNPA1L2Q32P51 320 aaKnown RBP11.95□□□□□ -0.5
PPP4R1-202ENST00000400555 DDI2Q5TDH0 399 aa11.95□□□□□ -0.5
PPP4R1-202ENST00000400555 ZNF544Q6NX49 715 aa11.95□□□□□ -0.5
PPP4R1-202ENST00000400555 MTFR2Q6P444 385 aa11.95□□□□□ -0.5
PPP4R1-202ENST00000400555 ZC3H14Q6PJT7 736 aaKnown RBP11.95□□□□□ -0.5
PPP4R1-202ENST00000400555 KLBQ86Z14 1044 aa11.95□□□□□ -0.5
PPP4R1-202ENST00000400555 NRMQ8IXM6 262 aa11.95□□□□□ -0.5
PPP4R1-202ENST00000400555 OR52P1PQ8NH57 321 aa11.95□□□□□ -0.5
PPP4R1-202ENST00000400555 TRIM43Q96BQ3 446 aaPredicted RBP11.95□□□□□ -0.5
PPP4R1-202ENST00000400555 TMCO6Q96DC7 493 aa11.95□□□□□ -0.5
PPP4R1-202ENST00000400555 INSM2Q96T92 566 aaPredicted RBP11.95□□□□□ -0.5
PPP4R1-202ENST00000400555 SAP130Q9H0E3 1048 aa11.95□□□□□ -0.5
PPP4R1-202ENST00000400555 RANGRFQ9HD47 186 aaPredicted RBP11.95□□□□□ -0.5
PPP4R1-202ENST00000400555 HCN2Q9UL51 889 aa11.95□□□□□ -0.5
PPP4R1-202ENST00000400555 REM1O75628 298 aa11.94□□□□□ -0.5
PPP4R1-202ENST00000400555 GKN3PP0CG01 181 aa11.94□□□□□ -0.5
PPP4R1-202ENST00000400555 NOS3P29474 1203 aa11.94□□□□□ -0.5
PPP4R1-202ENST00000400555 SRP54P61011 504 aaKnown RBP11.94□□□□□ -0.5
PPP4R1-202ENST00000400555 CSTF1Q05048 431 aaKnown RBP11.94□□□□□ -0.5
PPP4R1-202ENST00000400555 PRKCDQ05655 676 aa11.94□□□□□ -0.5
PPP4R1-202ENST00000400555 ZNF77Q15935 545 aa11.94□□□□□ -0.5
PPP4R1-202ENST00000400555 WSCD2Q2TBF2 565 aa11.94□□□□□ -0.5
PPP4R1-202ENST00000400555 AGAP6Q5VW22 663 aa11.94□□□□□ -0.5
PPP4R1-202ENST00000400555 MLIPQ5VWP3 458 aa11.94□□□□□ -0.5
PPP4R1-202ENST00000400555 PDZD3Q86UT5 571 aa11.94□□□□□ -0.5
PPP4R1-202ENST00000400555 PHC2Q8IXK0 858 aa11.94□□□□□ -0.5
PPP4R1-202ENST00000400555 OR10H4Q8NGA5 316 aa11.94□□□□□ -0.5
PPP4R1-202ENST00000400555 OR52I1Q8NGK6 324 aa11.94□□□□□ -0.5
PPP4R1-202ENST00000400555 RSPRY1Q96DX4 576 aa11.94□□□□□ -0.5
PPP4R1-202ENST00000400555 NEURL3Q96EH8 262 aa11.94□□□□□ -0.5
PPP4R1-202ENST00000400555 DNAJA3Q96EY1 480 aa11.94□□□□□ -0.5
PPP4R1-202ENST00000400555 AGAP4Q96P64 663 aa11.94□□□□□ -0.5
PPP4R1-202ENST00000400555 SECISBP2Q96T21 854 aaKnown RBP11.94□□□□□ -0.5
PPP4R1-202ENST00000400555 TXNL4BQ9NX01 149 aaKnown RBP11.94□□□□□ -0.5
PPP4R1-202ENST00000400555 SAGE1Q9NXZ1 904 aa11.94□□□□□ -0.5
PPP4R1-202ENST00000400555 NLKQ9UBE8 527 aa11.94□□□□□ -0.5
PPP4R1-202ENST00000400555 KLK4Q9Y5K2 254 aa11.94□□□□□ -0.5
PPP4R1-202ENST00000400555 N6AMT1Q9Y5N5 214 aa11.94□□□□□ -0.5
PPP4R1-202ENST00000400555 SH3D21A4FU49 640 aa11.94□□□□□ -0.5
PPP4R1-202ENST00000400555 GRXCR1A8MXD5 290 aa11.94□□□□□ -0.5
PPP4R1-202ENST00000400555 KIAA0355O15063 1070 aa11.94□□□□□ -0.5
PPP4R1-202ENST00000400555 FCMRO60667 390 aa11.94□□□□□ -0.5
PPP4R1-202ENST00000400555 SOD1P00441 154 aa11.94□□□□□ -0.5
PPP4R1-202ENST00000400555 BSGP35613 385 aa11.94□□□□□ -0.5
PPP4R1-202ENST00000400555 KCNJ5P48544 419 aa11.94□□□□□ -0.5
PPP4R1-202ENST00000400555 SMSP52788 366 aa11.94□□□□□ -0.5
PPP4R1-202ENST00000400555 ZNF362Q5T0B9 420 aaPredicted RBP11.94□□□□□ -0.5
PPP4R1-202ENST00000400555 ATAD3CQ5T2N8 411 aa11.94□□□□□ -0.5
PPP4R1-202ENST00000400555 SYCE2Q6PIF2 218 aa11.94□□□□□ -0.5
PPP4R1-202ENST00000400555 ZNF557Q8N988 423 aaPredicted RBP11.94□□□□□ -0.5
PPP4R1-202ENST00000400555 TBC1D20Q96BZ9 403 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms