RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 GPRC6AQ5T6X5 926 aa16.15■□□□□ 0.18
PTPRA-205ENST00000399903 CERS6Q6ZMG9 384 aa16.15■□□□□ 0.18
PTPRA-205ENST00000399903 RFLNAQ6ZTI6 216 aa16.15■□□□□ 0.18
PTPRA-205ENST00000399903 VRK3Q8IV63 474 aa16.15■□□□□ 0.18
PTPRA-205ENST00000399903 OR8J2Q8NGG1 315 aa16.15■□□□□ 0.18
PTPRA-205ENST00000399903 NXPE2Q96DL1 559 aa16.15■□□□□ 0.18
PTPRA-205ENST00000399903 SGTBQ96EQ0 304 aa16.15■□□□□ 0.18
PTPRA-205ENST00000399903 TBX5Q99593 518 aa16.15■□□□□ 0.18
PTPRA-205ENST00000399903 P2RY13Q9BPV8 354 aa16.15■□□□□ 0.18
PTPRA-205ENST00000399903 MCOLN1Q9GZU1 580 aa16.15■□□□□ 0.18
PTPRA-205ENST00000399903 ANKRD36A6QL64 1941 aa16.15■□□□□ 0.18
PTPRA-205ENST00000399903 RPS10-NUDT3A0A1W2PQS6 291 aa16.14■□□□□ 0.17
PTPRA-205ENST00000399903 TCRBV16S1A1N1A0A5B0 115 aa16.14■□□□□ 0.17
PTPRA-205ENST00000399903 E7EQ34 232 aa16.14■□□□□ 0.17
PTPRA-205ENST00000399903 ERVFC1P60507 584 aa16.14■□□□□ 0.17
PTPRA-205ENST00000399903 MAP4K2Q12851 820 aa16.14■□□□□ 0.17
PTPRA-205ENST00000399903 COL28A1Q2UY09 1125 aa16.14■□□□□ 0.17
PTPRA-205ENST00000399903 POM121L1PQ3SYA9 428 aa16.14■□□□□ 0.17
PTPRA-205ENST00000399903 CMTM8Q8IZV2 173 aa16.14■□□□□ 0.17
PTPRA-205ENST00000399903 METTL17Q9H7H0 456 aaPredicted RBP16.14■□□□□ 0.17
PTPRA-205ENST00000399903 HEXA-AS1Q9H8Q6 139 aa16.14■□□□□ 0.17
PTPRA-205ENST00000399903 IMP3Q9NV31 184 aaKnown RBP16.14■□□□□ 0.17
PTPRA-205ENST00000399903 CORO2BQ9UQ03 480 aa16.14■□□□□ 0.17
PTPRA-205ENST00000399903 CHD9Q3L8U1 2897 aa16.14■□□□□ 0.17
PTPRA-205ENST00000399903 E9PQ18 207 aa16.14■□□□□ 0.17
PTPRA-205ENST00000399903 RRASP10301 218 aa16.14■□□□□ 0.17
PTPRA-205ENST00000399903 CD70P32970 193 aa16.14■□□□□ 0.17
PTPRA-205ENST00000399903 MLLT1Q03111 559 aaPredicted RBP16.14■□□□□ 0.17
PTPRA-205ENST00000399903 NAE1Q13564 534 aa16.14■□□□□ 0.17
PTPRA-205ENST00000399903 ALG1LQ6GMV1 187 aa16.14■□□□□ 0.17
PTPRA-205ENST00000399903 SPRED2Q7Z698 418 aa16.14■□□□□ 0.17
PTPRA-205ENST00000399903 TSPAN33Q86UF1 283 aa16.14■□□□□ 0.17
PTPRA-205ENST00000399903 GSX2Q9BZM3 304 aa16.14■□□□□ 0.17
PTPRA-205ENST00000399903 RETREG1Q9H6L5 497 aa16.14■□□□□ 0.17
PTPRA-205ENST00000399903 LHX3Q9UBR4 397 aa16.14■□□□□ 0.17
PTPRA-205ENST00000399903 ZNF282Q9UDV7 671 aaPredicted RBP16.14■□□□□ 0.17
PTPRA-205ENST00000399903 IL20RAQ9UHF4 553 aa16.14■□□□□ 0.17
PTPRA-205ENST00000399903 CD84Q9UIB8 345 aa16.14■□□□□ 0.17
PTPRA-205ENST00000399903 CCL26Q9Y258 94 aa16.14■□□□□ 0.17
PTPRA-205ENST00000399903 SESN1Q9Y6P5 492 aa16.14■□□□□ 0.17
PTPRA-205ENST00000399903 FFAR1O14842 300 aa16.14■□□□□ 0.17
PTPRA-205ENST00000399903 IFNA14P01570 189 aa16.14■□□□□ 0.17
PTPRA-205ENST00000399903 APOC3P02656 99 aa16.14■□□□□ 0.17
PTPRA-205ENST00000399903 CPEP16870 476 aa16.14■□□□□ 0.17
PTPRA-205ENST00000399903 RHCEP18577 417 aa16.14■□□□□ 0.17
PTPRA-205ENST00000399903 PPIBP23284 216 aaKnown RBP16.14■□□□□ 0.17
PTPRA-205ENST00000399903 CCR7P32248 378 aa16.14■□□□□ 0.17
PTPRA-205ENST00000399903 CSNK1DP48730 415 aa16.14■□□□□ 0.17
PTPRA-205ENST00000399903 EPHB3P54753 998 aa16.14■□□□□ 0.17
PTPRA-205ENST00000399903 KIAA1024LP59773 190 aa16.14■□□□□ 0.17
PTPRA-205ENST00000399903 ACSM5Q6NUN0 579 aa16.14■□□□□ 0.17
PTPRA-205ENST00000399903 TRIM40Q6P9F5 258 aa16.14■□□□□ 0.17
PTPRA-205ENST00000399903 ADGRF3Q8IZF5 1079 aa16.14■□□□□ 0.17
PTPRA-205ENST00000399903 OR4F15Q8NGB8 312 aa16.14■□□□□ 0.17
PTPRA-205ENST00000399903 KIAA1143Q96AT1 154 aaPredicted RBP16.14■□□□□ 0.17
PTPRA-205ENST00000399903 PLD4Q96BZ4 506 aa16.14■□□□□ 0.17
PTPRA-205ENST00000399903 SLC35C2Q9NQQ7 365 aa16.14■□□□□ 0.17
PTPRA-205ENST00000399903 SDHAF2Q9NX18 166 aa16.14■□□□□ 0.17
PTPRA-205ENST00000399903 REV3LO60673 3130 aa16.13■□□□□ 0.17
PTPRA-205ENST00000399903 CCL16O15467 120 aa16.13■□□□□ 0.17
PTPRA-205ENST00000399903 LALBAP00709 142 aa16.13■□□□□ 0.17
PTPRA-205ENST00000399903 FAM157BP0CG42 384 aa16.13■□□□□ 0.17
PTPRA-205ENST00000399903 PIPP12273 146 aaPredicted RBP16.13■□□□□ 0.17
PTPRA-205ENST00000399903 PXNP49023 591 aaPredicted RBP16.13■□□□□ 0.17
PTPRA-205ENST00000399903 LYPD4Q6UWN0 246 aa16.13■□□□□ 0.17
PTPRA-205ENST00000399903 ALKAL2Q6UX46 152 aa16.13■□□□□ 0.17
PTPRA-205ENST00000399903 SLC39A11Q8N1S5 342 aa16.13■□□□□ 0.17
PTPRA-205ENST00000399903 C2orf15Q8WU43 125 aaKnown RBP16.13■□□□□ 0.17
PTPRA-205ENST00000399903 HMGB4Q8WW32 186 aa16.13■□□□□ 0.17
PTPRA-205ENST00000399903 ASB12Q8WXK4 309 aa16.13■□□□□ 0.17
PTPRA-205ENST00000399903 ZSWIM3Q96MP5 696 aa16.13■□□□□ 0.17
PTPRA-205ENST00000399903 CPNE7Q9UBL6 633 aa16.13■□□□□ 0.17
PTPRA-205ENST00000399903 HRH3Q9Y5N1 445 aa16.13■□□□□ 0.17
PTPRA-205ENST00000399903 BACE2Q9Y5Z0 518 aa16.13■□□□□ 0.17
PTPRA-205ENST00000399903 LGI1O95970 557 aa16.13■□□□□ 0.17
PTPRA-205ENST00000399903 IDSP22304 550 aa16.13■□□□□ 0.17
PTPRA-205ENST00000399903 PUDPQ08623 228 aa16.13■□□□□ 0.17
PTPRA-205ENST00000399903 SYT14P1Q58G82 188 aa16.13■□□□□ 0.17
PTPRA-205ENST00000399903 ANXA8L1Q5VT79 327 aa16.13■□□□□ 0.17
PTPRA-205ENST00000399903 GPR135Q8IZ08 494 aa16.13■□□□□ 0.17
PTPRA-205ENST00000399903 SCRN2Q96FV2 425 aa16.13■□□□□ 0.17
PTPRA-205ENST00000399903 CXorf58Q96LI9 332 aa16.13■□□□□ 0.17
PTPRA-205ENST00000399903 SORCS2Q96PQ0 1159 aa16.13■□□□□ 0.17
PTPRA-205ENST00000399903 CACNG6Q9BXT2 260 aa16.13■□□□□ 0.17
PTPRA-205ENST00000399903 TAS2R7Q9NYW3 318 aa16.13■□□□□ 0.17
PTPRA-205ENST00000399903 ATPIF1Q9UII2 106 aa16.13■□□□□ 0.17
PTPRA-205ENST00000399903 ANGPT4Q9Y264 503 aa16.13■□□□□ 0.17
PTPRA-205ENST00000399903 CACNG2Q9Y698 323 aa16.13■□□□□ 0.17
PTPRA-205ENST00000399903 C1orf226A1L170 272 aa16.12■□□□□ 0.17
PTPRA-205ENST00000399903 SYNDIG1LA6NDD5 238 aa16.12■□□□□ 0.17
PTPRA-205ENST00000399903 CD22P20273 847 aa16.12■□□□□ 0.17
PTPRA-205ENST00000399903 ERVK-21P61565 698 aa16.12■□□□□ 0.17
PTPRA-205ENST00000399903 CLLU1Q5K131 121 aa16.12■□□□□ 0.17
PTPRA-205ENST00000399903 ZNF697Q5TEC3 545 aa16.12■□□□□ 0.17
PTPRA-205ENST00000399903 TMEM91Q6ZNR0 172 aa16.12■□□□□ 0.17
PTPRA-205ENST00000399903 OR8K5Q8NH50 307 aa16.12■□□□□ 0.17
PTPRA-205ENST00000399903 ZC3HAV1LQ96H79 300 aaKnown RBP16.12■□□□□ 0.17
PTPRA-205ENST00000399903 DPAGT1Q9H3H5 408 aa16.12■□□□□ 0.17
PTPRA-205ENST00000399903 IFT46Q9NQC8 304 aa16.12■□□□□ 0.17
PTPRA-205ENST00000399903 MBD1Q9UIS9 605 aaPredicted RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms