RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 GOT1L1Q8NHS2 421 aaPredicted RBP11.49□□□□□ -0.57
HLA-DQB1-203ENST00000399082 GTF2H4Q92759 462 aa11.49□□□□□ -0.57
HLA-DQB1-203ENST00000399082 MAGED4Q96JG8 741 aa11.49□□□□□ -0.57
HLA-DQB1-203ENST00000399082 OR52E6Q96RD3 313 aa11.49□□□□□ -0.57
HLA-DQB1-203ENST00000399082 LMF1Q96S06 567 aa11.49□□□□□ -0.57
HLA-DQB1-203ENST00000399082 NXF5Q9H1B4 397 aaKnown RBP11.49□□□□□ -0.57
HLA-DQB1-203ENST00000399082 MYLK2Q9H1R3 596 aa11.49□□□□□ -0.57
HLA-DQB1-203ENST00000399082 SERHL2Q9H4I8 314 aa11.49□□□□□ -0.57
HLA-DQB1-203ENST00000399082 EPS8L2Q9H6S3 715 aa11.49□□□□□ -0.57
HLA-DQB1-203ENST00000399082 FOLH1BQ9HBA9 442 aa11.49□□□□□ -0.57
HLA-DQB1-203ENST00000399082 DDX18Q9NVP1 670 aaKnown RBP11.49□□□□□ -0.57
HLA-DQB1-203ENST00000399082 TMEM45AQ9NWC5 275 aa11.49□□□□□ -0.57
HLA-DQB1-203ENST00000399082 TAS2R9Q9NYW1 312 aa11.49□□□□□ -0.57
HLA-DQB1-203ENST00000399082 ARMCX1Q9P291 453 aa11.49□□□□□ -0.57
HLA-DQB1-203ENST00000399082 MYOTQ9UBF9 498 aa11.49□□□□□ -0.57
HLA-DQB1-203ENST00000399082 BCAP29Q9UHQ4 241 aa11.49□□□□□ -0.57
HLA-DQB1-203ENST00000399082 LHX6Q9UPM6 363 aa11.49□□□□□ -0.57
HLA-DQB1-203ENST00000399082 TP53TG5Q9Y2B4 290 aa11.49□□□□□ -0.57
HLA-DQB1-203ENST00000399082 ZFYVE26Q68DK2 2539 aa11.49□□□□□ -0.57
HLA-DQB1-203ENST00000399082 BOD1L1Q8NFC6 3051 aa11.48□□□□□ -0.57
HLA-DQB1-203ENST00000399082 EMC8O43402 210 aa11.48□□□□□ -0.57
HLA-DQB1-203ENST00000399082 ITGA10O75578 1167 aa11.48□□□□□ -0.57
HLA-DQB1-203ENST00000399082 OR2J2O76002 312 aa11.48□□□□□ -0.57
HLA-DQB1-203ENST00000399082 ABCB1P08183 1280 aaPredicted RBP11.48□□□□□ -0.57
HLA-DQB1-203ENST00000399082 CORO7P57737 925 aa11.48□□□□□ -0.57
HLA-DQB1-203ENST00000399082 PSG6Q00889 435 aa11.48□□□□□ -0.57
HLA-DQB1-203ENST00000399082 NNATQ16517 81 aa11.48□□□□□ -0.57
HLA-DQB1-203ENST00000399082 VPS26BQ4G0F5 336 aa11.48□□□□□ -0.57
HLA-DQB1-203ENST00000399082 PAGE3Q5JUK9 113 aa11.48□□□□□ -0.57
HLA-DQB1-203ENST00000399082 C6orf163Q5TEZ5 329 aa11.48□□□□□ -0.57
HLA-DQB1-203ENST00000399082 ANXA8L1Q5VT79 327 aa11.48□□□□□ -0.57
HLA-DQB1-203ENST00000399082 AGAP7PQ5VUJ5 663 aa11.48□□□□□ -0.57
HLA-DQB1-203ENST00000399082 MFSD12Q6NUT3 480 aa11.48□□□□□ -0.57
HLA-DQB1-203ENST00000399082 DNAJC14Q6Y2X3 702 aaPredicted RBP11.48□□□□□ -0.57
HLA-DQB1-203ENST00000399082 MSANTD1Q6ZTZ1 278 aa11.48□□□□□ -0.57
HLA-DQB1-203ENST00000399082 ZNF227Q86WZ6 799 aa11.48□□□□□ -0.57
HLA-DQB1-203ENST00000399082 TREML1Q86YW5 311 aa11.48□□□□□ -0.57
HLA-DQB1-203ENST00000399082 MSRB3Q8IXL7 192 aa11.48□□□□□ -0.57
HLA-DQB1-203ENST00000399082 SLC5A8Q8N695 610 aa11.48□□□□□ -0.57
HLA-DQB1-203ENST00000399082 NUP43Q8NFH3 380 aa11.48□□□□□ -0.57
HLA-DQB1-203ENST00000399082 OR4A15Q8NGL6 344 aa11.48□□□□□ -0.57
HLA-DQB1-203ENST00000399082 SPDL1Q96EA4 605 aa11.48□□□□□ -0.57
HLA-DQB1-203ENST00000399082 C16orf58Q96GQ5 468 aa11.48□□□□□ -0.57
HLA-DQB1-203ENST00000399082 AGAP4Q96P64 663 aa11.48□□□□□ -0.57
HLA-DQB1-203ENST00000399082 BTBD9Q96Q07 612 aa11.48□□□□□ -0.57
HLA-DQB1-203ENST00000399082 GAL3ST4Q96RP7 486 aa11.48□□□□□ -0.57
HLA-DQB1-203ENST00000399082 RASL10BQ96S79 203 aa11.48□□□□□ -0.57
HLA-DQB1-203ENST00000399082 CCDC106Q9BWC9 280 aa11.48□□□□□ -0.57
HLA-DQB1-203ENST00000399082 PAIP1Q9H074 479 aaKnown RBP11.48□□□□□ -0.57
HLA-DQB1-203ENST00000399082 ADNPQ9H2P0 1102 aa11.48□□□□□ -0.57
HLA-DQB1-203ENST00000399082 NEUROD4Q9HD90 331 aa11.48□□□□□ -0.57
HLA-DQB1-203ENST00000399082 ZCCHC3Q9NUD5 404 aaKnown RBP11.48□□□□□ -0.57
HLA-DQB1-203ENST00000399082 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.48□□□□□ -0.57
HLA-DQB1-203ENST00000399082 GPATCH2Q9NW75 528 aa11.48□□□□□ -0.57
HLA-DQB1-203ENST00000399082 PLA2G3Q9NZ20 509 aa11.48□□□□□ -0.57
HLA-DQB1-203ENST00000399082 TUBD1Q9UJT1 453 aa11.48□□□□□ -0.57
HLA-DQB1-203ENST00000399082 TLN1Q9Y490 2541 aaKnown RBP11.47□□□□□ -0.57
HLA-DQB1-203ENST00000399082 RNF103-CHMP3A0A140T963 221 aa11.47□□□□□ -0.57
HLA-DQB1-203ENST00000399082 C2orf92A0A1B0GVN3 265 aa11.47□□□□□ -0.57
HLA-DQB1-203ENST00000399082 CCDC154A6NI56 674 aa11.47□□□□□ -0.57
HLA-DQB1-203ENST00000399082 FBP2O00757 339 aa11.47□□□□□ -0.57
HLA-DQB1-203ENST00000399082 CFLARO15519 480 aa11.47□□□□□ -0.57
HLA-DQB1-203ENST00000399082 COQ9O75208 318 aa11.47□□□□□ -0.57
HLA-DQB1-203ENST00000399082 BCAS2O75934 225 aaPredicted RBP11.47□□□□□ -0.57
HLA-DQB1-203ENST00000399082 CPSF4O95639 269 aaKnown RBP11.47□□□□□ -0.57
HLA-DQB1-203ENST00000399082 WDPCPO95876 746 aa11.47□□□□□ -0.57
HLA-DQB1-203ENST00000399082 F10P00742 488 aa11.47□□□□□ -0.57
HLA-DQB1-203ENST00000399082 GSNP06396 782 aa11.47□□□□□ -0.57
HLA-DQB1-203ENST00000399082 CT45A8P0DMV1 189 aa11.47□□□□□ -0.57
HLA-DQB1-203ENST00000399082 CT45A9P0DMV2 189 aa11.47□□□□□ -0.57
HLA-DQB1-203ENST00000399082 ACP2P11117 423 aa11.47□□□□□ -0.57
HLA-DQB1-203ENST00000399082 CCT3P49368 545 aaKnown RBP11.47□□□□□ -0.57
HLA-DQB1-203ENST00000399082 PRKAG1P54619 331 aa11.47□□□□□ -0.57
HLA-DQB1-203ENST00000399082 KCNK10P57789 538 aa11.47□□□□□ -0.57
HLA-DQB1-203ENST00000399082 LY6DQ14210 128 aa11.47□□□□□ -0.57
HLA-DQB1-203ENST00000399082 MEP1AQ16819 746 aa11.47□□□□□ -0.57
HLA-DQB1-203ENST00000399082 CT45A2Q5DJT8 189 aa11.47□□□□□ -0.57
HLA-DQB1-203ENST00000399082 PIGGQ5H8A4 983 aa11.47□□□□□ -0.57
HLA-DQB1-203ENST00000399082 SLC29A4Q7RTT9 530 aa11.47□□□□□ -0.57
HLA-DQB1-203ENST00000399082 MTDHQ86UE4 582 aaKnown RBP11.47□□□□□ -0.57
HLA-DQB1-203ENST00000399082 RBMXL3Q8N7X1 1067 aaKnown RBP11.47□□□□□ -0.57
HLA-DQB1-203ENST00000399082 C17orf47Q8NEP4 570 aa11.47□□□□□ -0.57
HLA-DQB1-203ENST00000399082 OR5L2Q8NGL0 311 aa11.47□□□□□ -0.57
HLA-DQB1-203ENST00000399082 SFXN5Q8TD22 340 aa11.47□□□□□ -0.57
HLA-DQB1-203ENST00000399082 RNF166Q96A37 237 aaPredicted RBP11.47□□□□□ -0.57
HLA-DQB1-203ENST00000399082 TP53INP1Q96A56 240 aa11.47□□□□□ -0.57
HLA-DQB1-203ENST00000399082 OTUB1Q96FW1 271 aaPredicted RBP11.47□□□□□ -0.57
HLA-DQB1-203ENST00000399082 ZNF354BQ96LW1 612 aa11.47□□□□□ -0.57
HLA-DQB1-203ENST00000399082 MS4A4EQ96PG1 132 aa11.47□□□□□ -0.57
HLA-DQB1-203ENST00000399082 BBC3Q96PG8 261 aaPredicted RBP11.47□□□□□ -0.57
HLA-DQB1-203ENST00000399082 LMF2Q9BU23 707 aaKnown RBP11.47□□□□□ -0.57
HLA-DQB1-203ENST00000399082 EQTNQ9NQ60 294 aa11.47□□□□□ -0.57
HLA-DQB1-203ENST00000399082 SLAMF8Q9P0V8 285 aa11.47□□□□□ -0.57
HLA-DQB1-203ENST00000399082 PRODH2Q9UF12 536 aa11.47□□□□□ -0.57
HLA-DQB1-203ENST00000399082 GPR55Q9Y2T6 319 aaPredicted RBP11.47□□□□□ -0.57
HLA-DQB1-203ENST00000399082 ARL2BPQ9Y2Y0 163 aa11.47□□□□□ -0.57
HLA-DQB1-203ENST00000399082 SNX8Q9Y5X2 465 aa11.47□□□□□ -0.57
HLA-DQB1-203ENST00000399082 TRBV5-3A0A0A0MS03 114 aa11.46□□□□□ -0.57
HLA-DQB1-203ENST00000399082 A0A1W2PP18 115 aa11.46□□□□□ -0.57
HLA-DQB1-203ENST00000399082 TO15178 435 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms