RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 C1QL3Q5VWW1 255 aa12.97□□□□□ -0.33
HLA-DQB1-202ENST00000399079 BICRALQ6AI39 1079 aa12.97□□□□□ -0.33
HLA-DQB1-202ENST00000399079 DESI1Q6ICB0 168 aa12.97□□□□□ -0.33
HLA-DQB1-202ENST00000399079 TMEM107Q6UX40 140 aa12.97□□□□□ -0.33
HLA-DQB1-202ENST00000399079 ZNF551Q7Z340 670 aaPredicted RBP12.97□□□□□ -0.33
HLA-DQB1-202ENST00000399079 HOMEZQ8IX15 550 aa12.97□□□□□ -0.33
HLA-DQB1-202ENST00000399079 LIX1Q8N485 282 aa12.97□□□□□ -0.33
HLA-DQB1-202ENST00000399079 FNDC5Q8NAU1 212 aa12.97□□□□□ -0.33
HLA-DQB1-202ENST00000399079 POGLUT1Q8NBL1 392 aa12.97□□□□□ -0.33
HLA-DQB1-202ENST00000399079 C17orf47Q8NEP4 570 aa12.97□□□□□ -0.33
HLA-DQB1-202ENST00000399079 OR52N2Q8NGI0 321 aa12.97□□□□□ -0.33
HLA-DQB1-202ENST00000399079 NUDT8Q8WV74 236 aa12.97□□□□□ -0.33
HLA-DQB1-202ENST00000399079 TUBGCP3Q96CW5 907 aa12.97□□□□□ -0.33
HLA-DQB1-202ENST00000399079 LCORQ96JN0 433 aaPredicted RBP12.97□□□□□ -0.33
HLA-DQB1-202ENST00000399079 AMDHD1Q96NU7 426 aa12.97□□□□□ -0.33
HLA-DQB1-202ENST00000399079 FAM173AQ9BQD7 235 aa12.97□□□□□ -0.33
HLA-DQB1-202ENST00000399079 TTTY12Q9BZ98 90 aa12.97□□□□□ -0.33
HLA-DQB1-202ENST00000399079 REEP4Q9H6H4 257 aa12.97□□□□□ -0.33
HLA-DQB1-202ENST00000399079 PROK2Q9HC23 129 aa12.97□□□□□ -0.33
HLA-DQB1-202ENST00000399079 PNPOQ9NVS9 261 aa12.97□□□□□ -0.33
HLA-DQB1-202ENST00000399079 TUBA8Q9NY65 449 aaPredicted RBP12.97□□□□□ -0.33
HLA-DQB1-202ENST00000399079 SH3BP4Q9P0V3 963 aa12.97□□□□□ -0.33
HLA-DQB1-202ENST00000399079 SH3BGRL2Q9UJC5 107 aa12.97□□□□□ -0.33
HLA-DQB1-202ENST00000399079 CFL2Q9Y281 166 aa12.97□□□□□ -0.33
HLA-DQB1-202ENST00000399079 SLC5A6Q9Y289 635 aa12.97□□□□□ -0.33
HLA-DQB1-202ENST00000399079 PTPN13Q12923 2485 aa12.96□□□□□ -0.33
HLA-DQB1-202ENST00000399079 PLOD3O60568 738 aa12.96□□□□□ -0.33
HLA-DQB1-202ENST00000399079 PDE9AO76083 593 aa12.96□□□□□ -0.33
HLA-DQB1-202ENST00000399079 STSP08842 583 aa12.96□□□□□ -0.33
HLA-DQB1-202ENST00000399079 SLC18A1P54219 525 aa12.96□□□□□ -0.33
HLA-DQB1-202ENST00000399079 CORO7P57737 925 aa12.96□□□□□ -0.33
HLA-DQB1-202ENST00000399079 PLGLB1Q02325 96 aa12.96□□□□□ -0.33
HLA-DQB1-202ENST00000399079 FOXO1Q12778 655 aa12.96□□□□□ -0.33
HLA-DQB1-202ENST00000399079 RPS6KA2Q15349 733 aa12.96□□□□□ -0.33
HLA-DQB1-202ENST00000399079 CMPK2Q5EBM0 449 aa12.96□□□□□ -0.33
HLA-DQB1-202ENST00000399079 IL23RQ5VWK5 629 aa12.96□□□□□ -0.33
HLA-DQB1-202ENST00000399079 FJX1Q86VR8 437 aa12.96□□□□□ -0.33
HLA-DQB1-202ENST00000399079 PPCDCQ96CD2 204 aa12.96□□□□□ -0.33
HLA-DQB1-202ENST00000399079 MAGED4Q96JG8 741 aa12.96□□□□□ -0.33
HLA-DQB1-202ENST00000399079 DEFB127Q9H1M4 99 aa12.96□□□□□ -0.33
HLA-DQB1-202ENST00000399079 NKIRAS1Q9NYS0 192 aa12.96□□□□□ -0.33
HLA-DQB1-202ENST00000399079 PRODH2Q9UF12 536 aa12.96□□□□□ -0.33
HLA-DQB1-202ENST00000399079 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.96□□□□□ -0.33
HLA-DQB1-202ENST00000399079 GPR55Q9Y2T6 319 aaPredicted RBP12.96□□□□□ -0.33
HLA-DQB1-202ENST00000399079 SETXQ7Z333 2677 aaKnown RBP12.96□□□□□ -0.34
HLA-DQB1-202ENST00000399079 USP9YO00507 2555 aaPredicted RBP12.95□□□□□ -0.34
HLA-DQB1-202ENST00000399079 UPK1AO00322 258 aa12.95□□□□□ -0.34
HLA-DQB1-202ENST00000399079 PDPK1O15530 556 aa12.95□□□□□ -0.34
HLA-DQB1-202ENST00000399079 CDC40O60508 579 aaKnown RBP eCLIP12.95□□□□□ -0.34
HLA-DQB1-202ENST00000399079 SLC19A2O60779 497 aa12.95□□□□□ -0.34
HLA-DQB1-202ENST00000399079 BCAS2O75934 225 aaPredicted RBP12.95□□□□□ -0.34
HLA-DQB1-202ENST00000399079 ABCB1P08183 1280 aaPredicted RBP12.95□□□□□ -0.34
HLA-DQB1-202ENST00000399079 CT45A8P0DMV1 189 aa12.95□□□□□ -0.34
HLA-DQB1-202ENST00000399079 CT45A9P0DMV2 189 aa12.95□□□□□ -0.34
HLA-DQB1-202ENST00000399079 H2AFXP16104 143 aaPredicted RBP12.95□□□□□ -0.34
HLA-DQB1-202ENST00000399079 EFNA1P20827 205 aaPredicted RBP12.95□□□□□ -0.34
HLA-DQB1-202ENST00000399079 PPICP45877 212 aa12.95□□□□□ -0.34
HLA-DQB1-202ENST00000399079 ASMTP46597 345 aa12.95□□□□□ -0.34
HLA-DQB1-202ENST00000399079 PPIAP62937 165 aaKnown RBP12.95□□□□□ -0.34
HLA-DQB1-202ENST00000399079 KCNJ2P63252 427 aa12.95□□□□□ -0.34
HLA-DQB1-202ENST00000399079 HSPB3Q12988 150 aa12.95□□□□□ -0.34
HLA-DQB1-202ENST00000399079 PDE7AQ13946 482 aa12.95□□□□□ -0.34
HLA-DQB1-202ENST00000399079 CT45A2Q5DJT8 189 aa12.95□□□□□ -0.34
HLA-DQB1-202ENST00000399079 AGBL2Q5U5Z8 902 aa12.95□□□□□ -0.34
HLA-DQB1-202ENST00000399079 NPSR1Q6W5P4 371 aa12.95□□□□□ -0.34
HLA-DQB1-202ENST00000399079 GK5Q6ZS86 529 aa12.95□□□□□ -0.34
HLA-DQB1-202ENST00000399079 CHERPQ8IWX8 916 aaKnown RBP12.95□□□□□ -0.34
HLA-DQB1-202ENST00000399079 DND1Q8IYX4 353 aaKnown RBP12.95□□□□□ -0.34
HLA-DQB1-202ENST00000399079 FBXW8Q8N3Y1 598 aa12.95□□□□□ -0.34
HLA-DQB1-202ENST00000399079 OR7A2PQ8NGA2 310 aa12.95□□□□□ -0.34
HLA-DQB1-202ENST00000399079 SSC4DQ8WTU2 575 aa12.95□□□□□ -0.34
HLA-DQB1-202ENST00000399079 DIO2Q92813 273 aa12.95□□□□□ -0.34
HLA-DQB1-202ENST00000399079 ERP27Q96DN0 273 aa12.95□□□□□ -0.34
HLA-DQB1-202ENST00000399079 ELP4Q96EB1 424 aa12.95□□□□□ -0.34
HLA-DQB1-202ENST00000399079 VSTM2LQ96N03 204 aa12.95□□□□□ -0.34
HLA-DQB1-202ENST00000399079 NUF2Q9BZD4 464 aa12.95□□□□□ -0.34
HLA-DQB1-202ENST00000399079 AKTIPQ9H8T0 292 aa12.95□□□□□ -0.34
HLA-DQB1-202ENST00000399079 FOLH1BQ9HBA9 442 aa12.95□□□□□ -0.34
HLA-DQB1-202ENST00000399079 TAS2R9Q9NYW1 312 aa12.95□□□□□ -0.34
HLA-DQB1-202ENST00000399079 HAO1Q9UJM8 370 aa12.95□□□□□ -0.34
HLA-DQB1-202ENST00000399079 CNOT11Q9UKZ1 510 aaKnown RBP12.95□□□□□ -0.34
HLA-DQB1-202ENST00000399079 A0A087WV62 115 aa12.94□□□□□ -0.34
HLA-DQB1-202ENST00000399079 TRGV8A0A0C4DH27 118 aa12.94□□□□□ -0.34
HLA-DQB1-202ENST00000399079 PLOD2O00469 737 aa12.94□□□□□ -0.34
HLA-DQB1-202ENST00000399079 ERN1O75460 977 aaKnown RBP12.94□□□□□ -0.34
HLA-DQB1-202ENST00000399079 GLSO94925 669 aaPredicted RBP12.94□□□□□ -0.34
HLA-DQB1-202ENST00000399079 LDLRP01130 860 aa12.94□□□□□ -0.34
HLA-DQB1-202ENST00000399079 DRD5P21918 477 aa12.94□□□□□ -0.34
HLA-DQB1-202ENST00000399079 MAPK1P28482 360 aa12.94□□□□□ -0.34
HLA-DQB1-202ENST00000399079 MAGEA5P43359 124 aa12.94□□□□□ -0.34
HLA-DQB1-202ENST00000399079 TMED10P49755 219 aaKnown RBP12.94□□□□□ -0.34
HLA-DQB1-202ENST00000399079 PLCXD2Q0VAA5 305 aa12.94□□□□□ -0.34
HLA-DQB1-202ENST00000399079 C4orf17Q53FE4 359 aa12.94□□□□□ -0.34
HLA-DQB1-202ENST00000399079 TTMPQ5BVD1 217 aa12.94□□□□□ -0.34
HLA-DQB1-202ENST00000399079 WDR53Q7Z5U6 358 aaPredicted RBP12.94□□□□□ -0.34
HLA-DQB1-202ENST00000399079 FGD2Q7Z6J4 655 aa12.94□□□□□ -0.34
HLA-DQB1-202ENST00000399079 SPPL2CQ8IUH8 684 aa12.94□□□□□ -0.34
HLA-DQB1-202ENST00000399079 GHDCQ8N2G8 530 aa12.94□□□□□ -0.34
HLA-DQB1-202ENST00000399079 TMEM251Q8N6I4 163 aa12.94□□□□□ -0.34
HLA-DQB1-202ENST00000399079 KRTCAP2Q8N6L1 136 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms