RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 BMP8AQ7Z5Y6 402 aa15.11■□□□□ 0.01
CHMP1A-201ENST00000397901 GPR65Q8IYL9 337 aa15.11■□□□□ 0.01
CHMP1A-201ENST00000397901 ZNF480Q8WV37 535 aa15.11■□□□□ 0.01
CHMP1A-201ENST00000397901 CPEB1Q9BZB8 566 aaKnown RBP15.11■□□□□ 0.01
CHMP1A-201ENST00000397901 TMEM168Q9H0V1 697 aa15.11■□□□□ 0.01
CHMP1A-201ENST00000397901 EMC7Q9NPA0 242 aa15.11■□□□□ 0.01
CHMP1A-201ENST00000397901 DMRT3Q9NQL9 472 aa15.11■□□□□ 0.01
CHMP1A-201ENST00000397901 RDH8Q9NYR8 311 aa15.11■□□□□ 0.01
CHMP1A-201ENST00000397901 GLS2Q9UI32 602 aa15.11■□□□□ 0.01
CHMP1A-201ENST00000397901 CHP2O43745 196 aa15.11■□□□□ 0.01
CHMP1A-201ENST00000397901 OR10H3O60404 316 aa15.11■□□□□ 0.01
CHMP1A-201ENST00000397901 KLHL18O94889 574 aa15.11■□□□□ 0.01
CHMP1A-201ENST00000397901 AP2A2O94973 939 aa15.11■□□□□ 0.01
CHMP1A-201ENST00000397901 WDPCPO95876 746 aa15.11■□□□□ 0.01
CHMP1A-201ENST00000397901 IL3P08700 152 aa15.11■□□□□ 0.01
CHMP1A-201ENST00000397901 HBQ1P09105 142 aa15.11■□□□□ 0.01
CHMP1A-201ENST00000397901 PIPP12273 146 aaPredicted RBP15.11■□□□□ 0.01
CHMP1A-201ENST00000397901 F8A1P23610 371 aa15.11■□□□□ 0.01
CHMP1A-201ENST00000397901 APEX1P27695 318 aaKnown RBP15.11■□□□□ 0.01
CHMP1A-201ENST00000397901 KLHL22Q53GT1 634 aa15.11■□□□□ 0.01
CHMP1A-201ENST00000397901 ZNF628Q5EBL2 1059 aa15.11■□□□□ 0.01
CHMP1A-201ENST00000397901 GAREM2Q75VX8 874 aa15.11■□□□□ 0.01
CHMP1A-201ENST00000397901 SGTBQ96EQ0 304 aa15.11■□□□□ 0.01
CHMP1A-201ENST00000397901 POLR2J2Q9GZM3 115 aaKnown RBP15.11■□□□□ 0.01
CHMP1A-201ENST00000397901 MED28Q9H204 178 aa15.11■□□□□ 0.01
CHMP1A-201ENST00000397901 SLC25A13Q9UJS0 675 aa15.11■□□□□ 0.01
CHMP1A-201ENST00000397901 TMCC3Q9ULS5 477 aa15.11■□□□□ 0.01
CHMP1A-201ENST00000397901 SNX11Q9Y5W9 270 aa15.11■□□□□ 0.01
CHMP1A-201ENST00000397901 CDH10Q9Y6N8 788 aa15.11■□□□□ 0.01
CHMP1A-201ENST00000397901 PIPSLA2A3N6 862 aa15.1■□□□□ 0.01
CHMP1A-201ENST00000397901 SMIM30A4D0T7 59 aa15.1■□□□□ 0.01
CHMP1A-201ENST00000397901 BCHEP06276 602 aa15.1■□□□□ 0.01
CHMP1A-201ENST00000397901 OSMP13725 252 aa15.1■□□□□ 0.01
CHMP1A-201ENST00000397901 HOXB3P14651 431 aaPredicted RBP15.1■□□□□ 0.01
CHMP1A-201ENST00000397901 EPHA5P54756 1037 aa15.1■□□□□ 0.01
CHMP1A-201ENST00000397901 PDE7AQ13946 482 aa15.1■□□□□ 0.01
CHMP1A-201ENST00000397901 ZNF284Q2VY69 593 aa15.1■□□□□ 0.01
CHMP1A-201ENST00000397901 FAM71E1Q6IPT2 247 aa15.1■□□□□ 0.01
CHMP1A-201ENST00000397901 HTR3DQ70Z44 454 aa15.1■□□□□ 0.01
CHMP1A-201ENST00000397901 IQCF1Q8N6M8 205 aa15.1■□□□□ 0.01
CHMP1A-201ENST00000397901 TCEANCQ8N8B7 351 aa15.1■□□□□ 0.01
CHMP1A-201ENST00000397901 OR9Q1Q8NGQ5 310 aa15.1■□□□□ 0.01
CHMP1A-201ENST00000397901 TMEM203Q969S6 136 aa15.1■□□□□ 0.01
CHMP1A-201ENST00000397901 FOPNLQ96NB1 174 aa15.1■□□□□ 0.01
CHMP1A-201ENST00000397901 USB1Q9BQ65 265 aaKnown RBP15.1■□□□□ 0.01
CHMP1A-201ENST00000397901 SHARPINQ9H0F6 387 aa15.1■□□□□ 0.01
CHMP1A-201ENST00000397901 SLC6A15Q9H2J7 730 aa15.1■□□□□ 0.01
CHMP1A-201ENST00000397901 NT5DC2Q9H857 520 aa15.1■□□□□ 0.01
CHMP1A-201ENST00000397901 NDUFB11Q9NX14 153 aa15.1■□□□□ 0.01
CHMP1A-201ENST00000397901 SAGE1Q9NXZ1 904 aa15.1■□□□□ 0.01
CHMP1A-201ENST00000397901 REV1Q9UBZ9 1251 aa15.1■□□□□ 0.01
CHMP1A-201ENST00000397901 NCKAP1Q9Y2A7 1128 aa15.1■□□□□ 0.01
CHMP1A-201ENST00000397901 DOCK6Q96HP0 2047 aa15.1■□□□□ 0.01
CHMP1A-201ENST00000397901 DSPPQ9NZW4 1301 aa15.1■□□□□ 0.01
CHMP1A-201ENST00000397901 QSOX1O00391 747 aa15.1■□□□□ 0.01
CHMP1A-201ENST00000397901 HK1P19367 917 aa15.1■□□□□ 0.01
CHMP1A-201ENST00000397901 VIPR1P32241 457 aa15.1■□□□□ 0.01
CHMP1A-201ENST00000397901 OPRD1P41143 372 aa15.1■□□□□ 0.01
CHMP1A-201ENST00000397901 POLR2LP62875 67 aaKnown RBP15.1■□□□□ 0.01
CHMP1A-201ENST00000397901 DEFB103AP81534 67 aa15.1■□□□□ 0.01
CHMP1A-201ENST00000397901 ZNF91Q05481 1191 aa15.1■□□□□ 0.01
CHMP1A-201ENST00000397901 NFE2L1Q14494 772 aa15.1■□□□□ 0.01
CHMP1A-201ENST00000397901 FCN2Q15485 313 aa15.1■□□□□ 0.01
CHMP1A-201ENST00000397901 MPP7Q5T2T1 576 aa15.1■□□□□ 0.01
CHMP1A-201ENST00000397901 CEACAM20Q6UY09 585 aa15.1■□□□□ 0.01
CHMP1A-201ENST00000397901 DEF8Q6ZN54 512 aa15.1■□□□□ 0.01
CHMP1A-201ENST00000397901 RBM45Q8IUH3 476 aaKnown RBP15.1■□□□□ 0.01
CHMP1A-201ENST00000397901 CPXM2Q8N436 756 aa15.1■□□□□ 0.01
CHMP1A-201ENST00000397901 TMEM145Q8NBT3 493 aa15.1■□□□□ 0.01
CHMP1A-201ENST00000397901 ZNF740Q8NDX6 193 aa15.1■□□□□ 0.01
CHMP1A-201ENST00000397901 PCNPQ8WW12 178 aaKnown RBP15.1■□□□□ 0.01
CHMP1A-201ENST00000397901 AP3S1Q92572 193 aa15.1■□□□□ 0.01
CHMP1A-201ENST00000397901 MRPS31Q92665 395 aaKnown RBP15.1■□□□□ 0.01
CHMP1A-201ENST00000397901 PDXPQ96GD0 296 aa15.1■□□□□ 0.01
CHMP1A-201ENST00000397901 LMLNQ96KR4 655 aa15.1■□□□□ 0.01
CHMP1A-201ENST00000397901 SLC6A18Q96N87 628 aa15.1■□□□□ 0.01
CHMP1A-201ENST00000397901 SLC6A16Q9GZN6 736 aa15.1■□□□□ 0.01
CHMP1A-201ENST00000397901 CXorf36Q9H7Y0 433 aa15.1■□□□□ 0.01
CHMP1A-201ENST00000397901 MIEF1Q9NQG6 463 aa15.1■□□□□ 0.01
CHMP1A-201ENST00000397901 GULP1Q9UBP9 304 aa15.1■□□□□ 0.01
CHMP1A-201ENST00000397901 ACSL5Q9ULC5 683 aa15.1■□□□□ 0.01
CHMP1A-201ENST00000397901 DYRK1BQ9Y463 629 aa15.1■□□□□ 0.01
CHMP1A-201ENST00000397901 HRH3Q9Y5N1 445 aa15.1■□□□□ 0.01
CHMP1A-201ENST00000397901 MKI67P46013 3256 aaKnown RBP15.1■□□□□ 0.01
CHMP1A-201ENST00000397901 KIAA1671Q9BY89 1806 aa15.09■□□□□ 0.01
CHMP1A-201ENST00000397901 LOC102723532A0A0G2JNH3 316 aa15.09■□□□□ 0.01
CHMP1A-201ENST00000397901 SLC5A10A0PJK1 596 aa15.09■□□□□ 0.01
CHMP1A-201ENST00000397901 TUBAL3A6NHL2 446 aa15.09■□□□□ 0.01
CHMP1A-201ENST00000397901 C5orf58C9J3I9 102 aa15.09■□□□□ 0.01
CHMP1A-201ENST00000397901 SEMA7AO75326 666 aa15.09■□□□□ 0.01
CHMP1A-201ENST00000397901 PROS1P07225 676 aa15.09■□□□□ 0.01
CHMP1A-201ENST00000397901 NPPBP16860 134 aa15.09■□□□□ 0.01
CHMP1A-201ENST00000397901 SDC2P34741 201 aa15.09■□□□□ 0.01
CHMP1A-201ENST00000397901 PPP3R1P63098 170 aa15.09■□□□□ 0.01
CHMP1A-201ENST00000397901 HSF2Q03933 536 aa15.09■□□□□ 0.01
CHMP1A-201ENST00000397901 TMEM220Q6QAJ8 160 aa15.09■□□□□ 0.01
CHMP1A-201ENST00000397901 CASP12Q6UXS9 341 aa15.09■□□□□ 0.01
CHMP1A-201ENST00000397901 TFAP2EQ6VUC0 442 aa15.09■□□□□ 0.01
CHMP1A-201ENST00000397901 FERD3LQ96RJ6 166 aa15.09■□□□□ 0.01
CHMP1A-201ENST00000397901 MND1Q9BWT6 205 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms