RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 LRRC69Q6ZNQ3 347 aa7.79□□□□□ -1.16
PTPRD-204ENST00000397606 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.79□□□□□ -1.16
PTPRD-204ENST00000397606 ADGRF3Q8IZF5 1079 aa7.79□□□□□ -1.16
PTPRD-204ENST00000397606 MOSPD2Q8NHP6 518 aa7.79□□□□□ -1.16
PTPRD-204ENST00000397606 WDR36Q8NI36 951 aaKnown RBP7.79□□□□□ -1.16
PTPRD-204ENST00000397606 HS6ST2Q96MM7 605 aa7.79□□□□□ -1.16
PTPRD-204ENST00000397606 A0A1B0GTQ1 180 aa7.78□□□□□ -1.16
PTPRD-204ENST00000397606 GALR3O60755 368 aaPredicted RBP7.78□□□□□ -1.16
PTPRD-204ENST00000397606 ANGPTL1O95841 491 aa7.78□□□□□ -1.16
PTPRD-204ENST00000397606 KCNAB1Q14722 419 aa7.78□□□□□ -1.16
PTPRD-204ENST00000397606 SMARCD3Q6STE5 483 aa7.78□□□□□ -1.16
PTPRD-204ENST00000397606 ASRGL1Q7L266 308 aa7.78□□□□□ -1.16
PTPRD-204ENST00000397606 SPNS2Q8IVW8 549 aa7.78□□□□□ -1.16
PTPRD-204ENST00000397606 AQP11Q8NBQ7 271 aa7.78□□□□□ -1.16
PTPRD-204ENST00000397606 HMGCLL1Q8TB92 370 aa7.78□□□□□ -1.16
PTPRD-204ENST00000397606 YIPF3Q9GZM5 350 aa7.78□□□□□ -1.16
PTPRD-204ENST00000397606 SLITRK2Q9H156 845 aa7.78□□□□□ -1.16
PTPRD-204ENST00000397606 PCOLCE2Q9UKZ9 415 aa7.78□□□□□ -1.16
PTPRD-204ENST00000397606 URB1O60287 2271 aaKnown RBP7.78□□□□□ -1.16
PTPRD-204ENST00000397606 CASC3O15234 703 aaKnown RBP7.78□□□□□ -1.16
PTPRD-204ENST00000397606 PPM1DO15297 605 aa7.78□□□□□ -1.16
PTPRD-204ENST00000397606 KIF1CO43896 1103 aaKnown RBP7.78□□□□□ -1.16
PTPRD-204ENST00000397606 TRIM3O75382 744 aaPredicted RBP7.78□□□□□ -1.16
PTPRD-204ENST00000397606 PPM1BO75688 479 aa7.78□□□□□ -1.16
PTPRD-204ENST00000397606 GIMD1P0DJR0 217 aa7.78□□□□□ -1.16
PTPRD-204ENST00000397606 IFI30P13284 250 aa7.78□□□□□ -1.16
PTPRD-204ENST00000397606 EXOSC7Q15024 291 aaKnown RBP7.78□□□□□ -1.16
PTPRD-204ENST00000397606 ATP6AP1Q15904 470 aa7.78□□□□□ -1.16
PTPRD-204ENST00000397606 C6orf52Q5T4I8 152 aa7.78□□□□□ -1.16
PTPRD-204ENST00000397606 LCN1P1Q5VSP4 162 aa7.78□□□□□ -1.16
PTPRD-204ENST00000397606 ZCCHC12Q6PEW1 402 aa7.78□□□□□ -1.16
PTPRD-204ENST00000397606 ZNF619Q8N2I2 560 aa7.78□□□□□ -1.16
PTPRD-204ENST00000397606 NEK6Q9HC98 313 aa7.78□□□□□ -1.16
PTPRD-204ENST00000397606 SLC6A20Q9NP91 592 aa7.78□□□□□ -1.16
PTPRD-204ENST00000397606 TVP23BQ9NYZ1 205 aa7.78□□□□□ -1.16
PTPRD-204ENST00000397606 FNDC1Q4ZHG4 1894 aaPredicted RBP7.78□□□□□ -1.16
PTPRD-204ENST00000397606 IGHV1OR21-1A0A087WYE8 117 aa7.78□□□□□ -1.16
PTPRD-204ENST00000397606 SHISA7A6NL88 538 aa7.78□□□□□ -1.16
PTPRD-204ENST00000397606 ZNF726A6NNF4 738 aa7.78□□□□□ -1.16
PTPRD-204ENST00000397606 FAAHO00519 579 aa7.78□□□□□ -1.16
PTPRD-204ENST00000397606 RFPL3O75679 317 aa7.78□□□□□ -1.16
PTPRD-204ENST00000397606 PLGP00747 810 aaPredicted RBP7.78□□□□□ -1.16
PTPRD-204ENST00000397606 RENP00797 406 aa7.78□□□□□ -1.16
PTPRD-204ENST00000397606 SMSP52788 366 aa7.78□□□□□ -1.16
PTPRD-204ENST00000397606 CCL7P80098 99 aa7.78□□□□□ -1.16
PTPRD-204ENST00000397606 DCST2Q5T1A1 773 aa7.78□□□□□ -1.16
PTPRD-204ENST00000397606 OPN5Q6U736 354 aa7.78□□□□□ -1.16
PTPRD-204ENST00000397606 LOXL4Q96JB6 756 aa7.78□□□□□ -1.16
PTPRD-204ENST00000397606 CCDC74BQ96LY2 380 aa7.78□□□□□ -1.16
PTPRD-204ENST00000397606 GUCD1Q96NT3 240 aa7.78□□□□□ -1.16
PTPRD-204ENST00000397606 OR2A14Q96R47 310 aa7.78□□□□□ -1.16
PTPRD-204ENST00000397606 ZNF559Q9BR84 538 aa7.78□□□□□ -1.16
PTPRD-204ENST00000397606 ZPBPQ9BS86 351 aa7.78□□□□□ -1.16
PTPRD-204ENST00000397606 BTBD2Q9BX70 525 aa7.78□□□□□ -1.16
PTPRD-204ENST00000397606 SPRTNQ9H040 489 aaPredicted RBP7.78□□□□□ -1.16
PTPRD-204ENST00000397606 KLHL31Q9H511 634 aa7.78□□□□□ -1.16
PTPRD-204ENST00000397606 C11orf16Q9NQ32 467 aa7.78□□□□□ -1.16
PTPRD-204ENST00000397606 N6AMT1Q9Y5N5 214 aa7.78□□□□□ -1.16
PTPRD-204ENST00000397606 LOC105369274A0A096LPK9 316 aa7.78□□□□□ -1.16
PTPRD-204ENST00000397606 LOC102723532A0A0G2JNH3 316 aa7.78□□□□□ -1.16
PTPRD-204ENST00000397606 OR2A25A4D2G3 310 aa7.78□□□□□ -1.16
PTPRD-204ENST00000397606 H6PDO95479 791 aa7.78□□□□□ -1.16
PTPRD-204ENST00000397606 ALDH3A2P51648 485 aa7.78□□□□□ -1.16
PTPRD-204ENST00000397606 MERTKQ12866 999 aa7.78□□□□□ -1.16
PTPRD-204ENST00000397606 PPP1R8Q12972 351 aaKnown RBP7.78□□□□□ -1.16
PTPRD-204ENST00000397606 DGCR6Q14129 220 aa7.78□□□□□ -1.16
PTPRD-204ENST00000397606 OR4N4Q8N0Y3 316 aa7.78□□□□□ -1.16
PTPRD-204ENST00000397606 DTWD1Q8N5C7 304 aa7.78□□□□□ -1.16
PTPRD-204ENST00000397606 ESX1Q8N693 406 aa7.78□□□□□ -1.16
PTPRD-204ENST00000397606 OR5D16Q8NGK9 328 aa7.78□□□□□ -1.16
PTPRD-204ENST00000397606 ZNF354BQ96LW1 612 aa7.78□□□□□ -1.16
PTPRD-204ENST00000397606 AMDHD1Q96NU7 426 aa7.78□□□□□ -1.16
PTPRD-204ENST00000397606 DGCR6LQ9BY27 220 aa7.78□□□□□ -1.16
PTPRD-204ENST00000397606 EVA1AQ9H8M9 152 aa7.78□□□□□ -1.16
PTPRD-204ENST00000397606 RHCGQ9UBD6 479 aa7.78□□□□□ -1.16
PTPRD-204ENST00000397606 PPT2Q9UMR5 302 aa7.78□□□□□ -1.16
PTPRD-204ENST00000397606 LOXL2Q9Y4K0 774 aa7.78□□□□□ -1.16
PTPRD-204ENST00000397606 TRBV11-1A0A0K0K1C0 115 aa7.77□□□□□ -1.16
PTPRD-204ENST00000397606 C4orf47A7E2U8 309 aa7.77□□□□□ -1.16
PTPRD-204ENST00000397606 PDLIM1O00151 329 aa7.77□□□□□ -1.16
PTPRD-204ENST00000397606 SPINT1O43278 529 aa7.77□□□□□ -1.16
PTPRD-204ENST00000397606 FADS2O95864 444 aaKnown RBP7.77□□□□□ -1.16
PTPRD-204ENST00000397606 TCN2P20062 427 aa7.77□□□□□ -1.16
PTPRD-204ENST00000397606 RRADP55042 308 aa7.77□□□□□ -1.16
PTPRD-204ENST00000397606 SELENOWP63302 87 aa7.77□□□□□ -1.16
PTPRD-204ENST00000397606 GUSBP11Q6P575 273 aa7.77□□□□□ -1.16
PTPRD-204ENST00000397606 C6orf15Q6UXA7 325 aaPredicted RBP7.77□□□□□ -1.16
PTPRD-204ENST00000397606 TMPRSS11AQ6ZMR5 421 aa7.77□□□□□ -1.16
PTPRD-204ENST00000397606 OAFQ86UD1 273 aa7.77□□□□□ -1.16
PTPRD-204ENST00000397606 KBTBD2Q8IY47 623 aa7.77□□□□□ -1.16
PTPRD-204ENST00000397606 OR1F2PQ96R84 312 aa7.77□□□□□ -1.16
PTPRD-204ENST00000397606 OR7D2Q96RA2 312 aa7.77□□□□□ -1.16
PTPRD-204ENST00000397606 CBLCQ9ULV8 474 aa7.77□□□□□ -1.16
PTPRD-204ENST00000397606 GSTK1Q9Y2Q3 226 aa7.77□□□□□ -1.16
PTPRD-204ENST00000397606 EFCAB9A8MZ26 197 aa7.77□□□□□ -1.17
PTPRD-204ENST00000397606 DSCR3O14972 297 aa7.77□□□□□ -1.17
PTPRD-204ENST00000397606 SOD1P00441 154 aa7.77□□□□□ -1.17
PTPRD-204ENST00000397606 ETS2P15036 469 aa7.77□□□□□ -1.17
PTPRD-204ENST00000397606 SLC6A8P48029 635 aa7.77□□□□□ -1.17
PTPRD-204ENST00000397606 AQP4P55087 323 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms