RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 FAM156AQ8NDB6 213 aa12.37□□□□□ -0.43
SEC13-209ENST00000397117 OR9A2Q8NGT5 310 aa12.37□□□□□ -0.43
SEC13-209ENST00000397117 OR10A6Q8NH74 314 aa12.37□□□□□ -0.43
SEC13-209ENST00000397117 PSMA8Q8TAA3 256 aa12.37□□□□□ -0.43
SEC13-209ENST00000397117 SUN3Q8TAQ9 357 aa12.37□□□□□ -0.43
SEC13-209ENST00000397117 CPT1CQ8TCG5 803 aa12.37□□□□□ -0.43
SEC13-209ENST00000397117 PNPT1Q8TCS8 783 aaKnown RBP12.37□□□□□ -0.43
SEC13-209ENST00000397117 ZFP90Q8TF47 636 aa12.37□□□□□ -0.43
SEC13-209ENST00000397117 ANKRD9Q96BM1 317 aaPredicted RBP12.37□□□□□ -0.43
SEC13-209ENST00000397117 FAM120BQ96EK7 910 aaKnown RBP12.37□□□□□ -0.43
SEC13-209ENST00000397117 RAD21L1Q9H4I0 556 aa12.37□□□□□ -0.43
SEC13-209ENST00000397117 IKZF5Q9H5V7 419 aa12.37□□□□□ -0.43
SEC13-209ENST00000397117 PIF1Q9H611 641 aa12.37□□□□□ -0.43
SEC13-209ENST00000397117 C3orf14Q9HBI5 128 aa12.37□□□□□ -0.43
SEC13-209ENST00000397117 CD300AQ9UGN4 299 aa12.37□□□□□ -0.43
SEC13-209ENST00000397117 DOPEY1Q5JWR5 2465 aa12.36□□□□□ -0.43
SEC13-209ENST00000397117 A0A1W2PS29 197 aa12.36□□□□□ -0.43
SEC13-209ENST00000397117 C21orf140B9A014 251 aa12.36□□□□□ -0.43
SEC13-209ENST00000397117 MGRN1O60291 552 aa12.36□□□□□ -0.43
SEC13-209ENST00000397117 SORBS2O94875 1100 aaKnown RBP12.36□□□□□ -0.43
SEC13-209ENST00000397117 BMP10O95393 424 aa12.36□□□□□ -0.43
SEC13-209ENST00000397117 SLC35E2P0CK97 266 aa12.36□□□□□ -0.43
SEC13-209ENST00000397117 HSD17B1P14061 328 aa12.36□□□□□ -0.43
SEC13-209ENST00000397117 NT5EP21589 574 aa12.36□□□□□ -0.43
SEC13-209ENST00000397117 MSX2P35548 267 aaPredicted RBP12.36□□□□□ -0.43
SEC13-209ENST00000397117 GSK3BP49841 420 aa12.36□□□□□ -0.43
SEC13-209ENST00000397117 PRR5P85299 388 aa12.36□□□□□ -0.43
SEC13-209ENST00000397117 OCA2Q04671 838 aa12.36□□□□□ -0.43
SEC13-209ENST00000397117 DUSP2Q05923 314 aa12.36□□□□□ -0.43
SEC13-209ENST00000397117 BIKQ13323 160 aa12.36□□□□□ -0.43
SEC13-209ENST00000397117 CYP51A1Q16850 503 aa12.36□□□□□ -0.43
SEC13-209ENST00000397117 TMEM107Q6UX40 140 aa12.36□□□□□ -0.43
SEC13-209ENST00000397117 PACS2Q86VP3 889 aa12.36□□□□□ -0.43
SEC13-209ENST00000397117 TNIP2Q8NFZ5 429 aa12.36□□□□□ -0.43
SEC13-209ENST00000397117 MOAP1Q96BY2 351 aa12.36□□□□□ -0.43
SEC13-209ENST00000397117 RBM18Q96H35 190 aaKnown RBP12.36□□□□□ -0.43
SEC13-209ENST00000397117 MAGED4Q96JG8 741 aa12.36□□□□□ -0.43
SEC13-209ENST00000397117 KAT8Q9H7Z6 458 aaKnown RBP12.36□□□□□ -0.43
SEC13-209ENST00000397117 AKIRIN1Q9H9L7 192 aaPredicted RBP12.36□□□□□ -0.43
SEC13-209ENST00000397117 SIRT3Q9NTG7 399 aaPredicted RBP12.36□□□□□ -0.43
SEC13-209ENST00000397117 SUCOQ9UBS9 1254 aaKnown RBP12.36□□□□□ -0.43
SEC13-209ENST00000397117 BCAP29Q9UHQ4 241 aa12.36□□□□□ -0.43
SEC13-209ENST00000397117 POMPQ9Y244 141 aa12.36□□□□□ -0.43
SEC13-209ENST00000397117 MMACHCQ9Y4U1 282 aa12.36□□□□□ -0.43
SEC13-209ENST00000397117 SEC16AO15027 2179 aa12.35□□□□□ -0.43
SEC13-209ENST00000397117 MYOCOSA0A1B0GUC4 107 aa12.35□□□□□ -0.43
SEC13-209ENST00000397117 GMNNO75496 209 aa12.35□□□□□ -0.43
SEC13-209ENST00000397117 JRKO75564 520 aa12.35□□□□□ -0.43
SEC13-209ENST00000397117 ATP1B1P05026 303 aa12.35□□□□□ -0.43
SEC13-209ENST00000397117 KLK3P07288 261 aaPredicted RBP12.35□□□□□ -0.43
SEC13-209ENST00000397117 MAOAP21397 527 aa12.35□□□□□ -0.43
SEC13-209ENST00000397117 PTGER1P34995 402 aa12.35□□□□□ -0.43
SEC13-209ENST00000397117 CRATP43155 626 aa12.35□□□□□ -0.43
SEC13-209ENST00000397117 BTG2P78543 158 aa12.35□□□□□ -0.43
SEC13-209ENST00000397117 BNIP2Q12982 314 aa12.35□□□□□ -0.43
SEC13-209ENST00000397117 TP53BP2Q13625 1128 aa12.35□□□□□ -0.43
SEC13-209ENST00000397117 TRIM25Q14258 630 aaKnown RBP12.35□□□□□ -0.43
SEC13-209ENST00000397117 NADK2Q4G0N4 442 aa12.35□□□□□ -0.43
SEC13-209ENST00000397117 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.35□□□□□ -0.43
SEC13-209ENST00000397117 TMEM64Q6YI46 380 aa12.35□□□□□ -0.43
SEC13-209ENST00000397117 RNF130Q86XS8 419 aa12.35□□□□□ -0.43
SEC13-209ENST00000397117 ZC3H7AQ8IWR0 971 aaKnown RBP12.35□□□□□ -0.43
SEC13-209ENST00000397117 C7orf57Q8NEG2 295 aa12.35□□□□□ -0.43
SEC13-209ENST00000397117 ADCY4Q8NFM4 1077 aa12.35□□□□□ -0.43
SEC13-209ENST00000397117 OR2T12Q8NG77 320 aa12.35□□□□□ -0.43
SEC13-209ENST00000397117 SFXN5Q8TD22 340 aa12.35□□□□□ -0.43
SEC13-209ENST00000397117 ASB9Q96DX5 294 aa12.35□□□□□ -0.43
SEC13-209ENST00000397117 NEURL3Q96EH8 262 aa12.35□□□□□ -0.43
SEC13-209ENST00000397117 PTCHD1Q96NR3 888 aa12.35□□□□□ -0.43
SEC13-209ENST00000397117 DGAT2Q96PD7 388 aa12.35□□□□□ -0.43
SEC13-209ENST00000397117 ALOXE3Q9BYJ1 711 aa12.35□□□□□ -0.43
SEC13-209ENST00000397117 LANCL2Q9NS86 450 aa12.35□□□□□ -0.43
SEC13-209ENST00000397117 ZCCHC3Q9NUD5 404 aaKnown RBP12.35□□□□□ -0.43
SEC13-209ENST00000397117 IFT80Q9P2H3 777 aaPredicted RBP12.35□□□□□ -0.43
SEC13-209ENST00000397117 PCDHGA9Q9Y5G4 932 aaKnown RBP12.35□□□□□ -0.43
SEC13-209ENST00000397117 GMEB1Q9Y692 573 aa12.35□□□□□ -0.43
SEC13-209ENST00000397117 TEP1Q99973 2627 aaKnown RBP12.34□□□□□ -0.43
SEC13-209ENST00000397117 MEN1O00255 615 aa12.34□□□□□ -0.43
SEC13-209ENST00000397117 GSTA4O15217 222 aa12.34□□□□□ -0.43
SEC13-209ENST00000397117 EMC8O43402 210 aa12.34□□□□□ -0.43
SEC13-209ENST00000397117 SLITRK5O94991 958 aa12.34□□□□□ -0.43
SEC13-209ENST00000397117 IFNA16P05015 189 aa12.34□□□□□ -0.43
SEC13-209ENST00000397117 GPX2P18283 190 aa12.34□□□□□ -0.43
SEC13-209ENST00000397117 RORAP35398 523 aa12.34□□□□□ -0.43
SEC13-209ENST00000397117 MC3RP41968 323 aa12.34□□□□□ -0.43
SEC13-209ENST00000397117 PRKAG1P54619 331 aa12.34□□□□□ -0.43
SEC13-209ENST00000397117 TRAP1Q12931 704 aaKnown RBP12.34□□□□□ -0.43
SEC13-209ENST00000397117 RIPK1Q13546 671 aa12.34□□□□□ -0.43
SEC13-209ENST00000397117 SERTAD2Q14140 314 aa12.34□□□□□ -0.43
SEC13-209ENST00000397117 FLOT2Q14254 428 aa12.34□□□□□ -0.43
SEC13-209ENST00000397117 RGNQ15493 299 aa12.34□□□□□ -0.43
SEC13-209ENST00000397117 LTB4RQ15722 352 aa12.34□□□□□ -0.43
SEC13-209ENST00000397117 VWA2Q5GFL6 755 aa12.34□□□□□ -0.43
SEC13-209ENST00000397117 QSOX2Q6ZRP7 698 aa12.34□□□□□ -0.43
SEC13-209ENST00000397117 MED25Q71SY5 747 aa12.34□□□□□ -0.43
SEC13-209ENST00000397117 C6orf120Q7Z4R8 191 aa12.34□□□□□ -0.43
SEC13-209ENST00000397117 SERPINA11Q86U17 422 aa12.34□□□□□ -0.43
SEC13-209ENST00000397117 ST13P4Q8IZP2 240 aaPredicted RBP12.34□□□□□ -0.43
SEC13-209ENST00000397117 OR56A1Q8NGH5 318 aa12.34□□□□□ -0.43
SEC13-209ENST00000397117 OR52N2Q8NGI0 321 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms