RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 EBF4Q9BQW3 602 aa13.46□□□□□ -0.25
SEC13-208ENST00000397109 BTBD10Q9BSF8 475 aa13.46□□□□□ -0.25
SEC13-208ENST00000397109 WWTR1Q9GZV5 400 aa13.46□□□□□ -0.25
SEC13-208ENST00000397109 TCF7L2Q9NQB0 619 aa13.46□□□□□ -0.25
SEC13-208ENST00000397109 TAGLN3Q9UI15 199 aa13.46□□□□□ -0.25
SEC13-208ENST00000397109 DLGAP4Q9Y2H0 992 aa13.46□□□□□ -0.25
SEC13-208ENST00000397109 A0A1W2PS29 197 aa13.45□□□□□ -0.26
SEC13-208ENST00000397109 TMEM233B4DJY2 109 aa13.45□□□□□ -0.26
SEC13-208ENST00000397109 TFECO14948 347 aaPredicted RBP13.45□□□□□ -0.26
SEC13-208ENST00000397109 MGRN1O60291 552 aa13.45□□□□□ -0.26
SEC13-208ENST00000397109 CHEK2O96017 543 aa13.45□□□□□ -0.26
SEC13-208ENST00000397109 P04436 131 aa13.45□□□□□ -0.26
SEC13-208ENST00000397109 ATP1B1P05026 303 aa13.45□□□□□ -0.26
SEC13-208ENST00000397109 CNR1P21554 472 aa13.45□□□□□ -0.26
SEC13-208ENST00000397109 TIA1P31483 386 aaKnown RBP eCLIP13.45□□□□□ -0.26
SEC13-208ENST00000397109 RAE1P78406 368 aaKnown RBP13.45□□□□□ -0.26
SEC13-208ENST00000397109 BTKQ06187 659 aa13.45□□□□□ -0.26
SEC13-208ENST00000397109 MAP4K2Q12851 820 aa13.45□□□□□ -0.26
SEC13-208ENST00000397109 EBPQ15125 230 aaKnown RBP13.45□□□□□ -0.26
SEC13-208ENST00000397109 FAM219BQ5XKK7 198 aa13.45□□□□□ -0.26
SEC13-208ENST00000397109 HLA-DQA1Q5Y7H0 255 aa13.45□□□□□ -0.26
SEC13-208ENST00000397109 GK5Q6ZS86 529 aa13.45□□□□□ -0.26
SEC13-208ENST00000397109 TAGAPQ8N103 731 aa13.45□□□□□ -0.26
SEC13-208ENST00000397109 DOK4Q8TEW6 326 aa13.45□□□□□ -0.26
SEC13-208ENST00000397109 TP53INP1Q96A56 240 aa13.45□□□□□ -0.26
SEC13-208ENST00000397109 C11orf24Q96F05 449 aaPredicted RBP13.45□□□□□ -0.26
SEC13-208ENST00000397109 GAL3ST4Q96RP7 486 aa13.45□□□□□ -0.26
SEC13-208ENST00000397109 PFDN4Q9NQP4 134 aa13.45□□□□□ -0.26
SEC13-208ENST00000397109 SACM1LQ9NTJ5 587 aa13.45□□□□□ -0.26
SEC13-208ENST00000397109 CFL2Q9Y281 166 aa13.45□□□□□ -0.26
SEC13-208ENST00000397109 CCL27Q9Y4X3 112 aa13.45□□□□□ -0.26
SEC13-208ENST00000397109 TRGV8A0A0C4DH27 118 aa13.44□□□□□ -0.26
SEC13-208ENST00000397109 C2orf92A0A1B0GVN3 265 aa13.44□□□□□ -0.26
SEC13-208ENST00000397109 SLC19A2O60779 497 aa13.44□□□□□ -0.26
SEC13-208ENST00000397109 DIAPH2O60879 1101 aa13.44□□□□□ -0.26
SEC13-208ENST00000397109 RSL1D1O76021 490 aaKnown RBP13.44□□□□□ -0.26
SEC13-208ENST00000397109 NADKO95544 446 aaPredicted RBP13.44□□□□□ -0.26
SEC13-208ENST00000397109 IL3P08700 152 aa13.44□□□□□ -0.26
SEC13-208ENST00000397109 ANXA4P09525 319 aaPredicted RBP13.44□□□□□ -0.26
SEC13-208ENST00000397109 SSTR4P31391 388 aa13.44□□□□□ -0.26
SEC13-208ENST00000397109 FEN1P39748 380 aaKnown RBP13.44□□□□□ -0.26
SEC13-208ENST00000397109 CA7P43166 264 aa13.44□□□□□ -0.26
SEC13-208ENST00000397109 GPR85P60893 370 aa13.44□□□□□ -0.26
SEC13-208ENST00000397109 ZNF750Q32MQ0 723 aa13.44□□□□□ -0.26
SEC13-208ENST00000397109 ZNF791Q3KP31 576 aaPredicted RBP13.44□□□□□ -0.26
SEC13-208ENST00000397109 XKR7Q5GH72 579 aa13.44□□□□□ -0.26
SEC13-208ENST00000397109 RNFT1Q5M7Z0 435 aa13.44□□□□□ -0.26
SEC13-208ENST00000397109 C1QL3Q5VWW1 255 aa13.44□□□□□ -0.26
SEC13-208ENST00000397109 SLC22A10Q63ZE4 541 aa13.44□□□□□ -0.26
SEC13-208ENST00000397109 MTFR2Q6P444 385 aa13.44□□□□□ -0.26
SEC13-208ENST00000397109 MAVSQ7Z434 540 aa13.44□□□□□ -0.26
SEC13-208ENST00000397109 SPPL2CQ8IUH8 684 aa13.44□□□□□ -0.26
SEC13-208ENST00000397109 MMP21Q8N119 569 aa13.44□□□□□ -0.26
SEC13-208ENST00000397109 LRRC25Q8N386 305 aaPredicted RBP13.44□□□□□ -0.26
SEC13-208ENST00000397109 VWA5B2Q8N398 1253 aa13.44□□□□□ -0.26
SEC13-208ENST00000397109 ZNF615Q8N8J6 731 aa13.44□□□□□ -0.26
SEC13-208ENST00000397109 OR2M7Q8NG81 312 aa13.44□□□□□ -0.26
SEC13-208ENST00000397109 CEP70Q8NHQ1 597 aa13.44□□□□□ -0.26
SEC13-208ENST00000397109 C16orf78Q8WTQ4 265 aa13.44□□□□□ -0.26
SEC13-208ENST00000397109 TWIST2Q8WVJ9 160 aa13.44□□□□□ -0.26
SEC13-208ENST00000397109 SPACA9Q96E40 222 aaPredicted RBP13.44□□□□□ -0.26
SEC13-208ENST00000397109 FAM173AQ9BQD7 235 aa13.44□□□□□ -0.26
SEC13-208ENST00000397109 TSPAN10Q9H1Z9 355 aaPredicted RBP13.44□□□□□ -0.26
SEC13-208ENST00000397109 OR10A5Q9H207 317 aa13.44□□□□□ -0.26
SEC13-208ENST00000397109 TUBB1Q9H4B7 451 aa13.44□□□□□ -0.26
SEC13-208ENST00000397109 GIMAP4Q9NUV9 329 aa13.44□□□□□ -0.26
SEC13-208ENST00000397109 EHD3Q9NZN3 535 aa13.44□□□□□ -0.26
SEC13-208ENST00000397109 SUCOQ9UBS9 1254 aaKnown RBP13.44□□□□□ -0.26
SEC13-208ENST00000397109 UTS2RQ9UKP6 389 aa13.44□□□□□ -0.26
SEC13-208ENST00000397109 WBP11Q9Y2W2 641 aaKnown RBP13.44□□□□□ -0.26
SEC13-208ENST00000397109 ACOT7O00154 380 aa13.43□□□□□ -0.26
SEC13-208ENST00000397109 SLC28A1O00337 649 aa13.43□□□□□ -0.26
SEC13-208ENST00000397109 ZNF354AO60765 605 aaPredicted RBP13.43□□□□□ -0.26
SEC13-208ENST00000397109 WISP2O76076 250 aa13.43□□□□□ -0.26
SEC13-208ENST00000397109 CLPSP04118 112 aa13.43□□□□□ -0.26
SEC13-208ENST00000397109 FBXO45P0C2W1 286 aa13.43□□□□□ -0.26
SEC13-208ENST00000397109 CT62P0C5K7 136 aa13.43□□□□□ -0.26
SEC13-208ENST00000397109 RNF224P0DH78 156 aa13.43□□□□□ -0.26
SEC13-208ENST00000397109 PRPH2P23942 346 aa13.43□□□□□ -0.26
SEC13-208ENST00000397109 ELF3P78545 371 aaPredicted RBP13.43□□□□□ -0.26
SEC13-208ENST00000397109 PLGLB1Q02325 96 aa13.43□□□□□ -0.26
SEC13-208ENST00000397109 ZNF763Q0D2J5 394 aa13.43□□□□□ -0.26
SEC13-208ENST00000397109 PRICKLE4Q2TBC4 344 aa13.43□□□□□ -0.26
SEC13-208ENST00000397109 DNAL1Q4LDG9 190 aa13.43□□□□□ -0.26
SEC13-208ENST00000397109 Q6ZPB1 254 aaPredicted RBP13.43□□□□□ -0.26
SEC13-208ENST00000397109 FJX1Q86VR8 437 aa13.43□□□□□ -0.26
SEC13-208ENST00000397109 ZNF441Q8N8Z8 693 aa13.43□□□□□ -0.26
SEC13-208ENST00000397109 C17orf47Q8NEP4 570 aa13.43□□□□□ -0.26
SEC13-208ENST00000397109 AGR3Q8TD06 166 aa13.43□□□□□ -0.26
SEC13-208ENST00000397109 ACTRT2Q8TDY3 377 aa13.43□□□□□ -0.26
SEC13-208ENST00000397109 ZNF681Q96N22 645 aa13.43□□□□□ -0.26
SEC13-208ENST00000397109 BRINP2Q9C0B6 783 aa13.43□□□□□ -0.26
SEC13-208ENST00000397109 MEAF6Q9HAF1 191 aa13.43□□□□□ -0.26
SEC13-208ENST00000397109 DEPPQ9NTK1 212 aa13.43□□□□□ -0.26
SEC13-208ENST00000397109 ARL8BQ9NVJ2 186 aa13.43□□□□□ -0.26
SEC13-208ENST00000397109 CNIH4Q9P003 139 aa13.43□□□□□ -0.26
SEC13-208ENST00000397109 PLEKHB1Q9UF11 243 aaPredicted RBP13.43□□□□□ -0.26
SEC13-208ENST00000397109 ZNF835Q9Y2P0 537 aa13.43□□□□□ -0.26
SEC13-208ENST00000397109 EML6Q6ZMW3 1958 aa13.43□□□□□ -0.26
SEC13-208ENST00000397109 PCNX1Q96RV3 2341 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms