RNA–Protein interactions for RNA: ENST00000397066.8

CCNF-202, Transcript of cyclin F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNF, Length 4,283 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-202ENST00000397066 ZNF767PQ75MW2 155 aa13.92□□□□□ -0.18
CCNF-202ENST00000397066 SLC9B2Q86UD5 537 aa13.92□□□□□ -0.18
CCNF-202ENST00000397066 RNF31Q96EP0 1072 aa13.92□□□□□ -0.18
CCNF-202ENST00000397066 ZNF558Q96NG5 402 aa13.92□□□□□ -0.18
CCNF-202ENST00000397066 MAT2BQ9NZL9 334 aa13.92□□□□□ -0.18
CCNF-202ENST00000397066 CPSF4LA6NMK7 179 aaKnown RBP13.91□□□□□ -0.18
CCNF-202ENST00000397066 POP7O75817 140 aaKnown RBP13.91□□□□□ -0.18
CCNF-202ENST00000397066 LGI1O95970 557 aa13.91□□□□□ -0.18
CCNF-202ENST00000397066 C1QBP02746 253 aa13.91□□□□□ -0.18
CCNF-202ENST00000397066 SOX18P35713 384 aa13.91□□□□□ -0.18
CCNF-202ENST00000397066 RAB8AP61006 207 aa13.91□□□□□ -0.18
CCNF-202ENST00000397066 LSM11P83369 360 aaKnown RBP eCLIP13.91□□□□□ -0.182e-9■□□□□ 11.1
CCNF-202ENST00000397066 GRIN2CQ14957 1233 aa13.91□□□□□ -0.18
CCNF-202ENST00000397066 GAREM2Q75VX8 874 aa13.91□□□□□ -0.18
CCNF-202ENST00000397066 TCTE3Q8IZS6 198 aa13.91□□□□□ -0.18
CCNF-202ENST00000397066 CPXM2Q8N436 756 aa13.91□□□□□ -0.18
CCNF-202ENST00000397066 OR4D11Q8NGI4 311 aa13.91□□□□□ -0.18
CCNF-202ENST00000397066 MED30Q96HR3 178 aa13.91□□□□□ -0.18
CCNF-202ENST00000397066 VN1R3Q9BXE9 311 aa13.91□□□□□ -0.18
CCNF-202ENST00000397066 DSPPQ9NZW4 1301 aa13.91□□□□□ -0.18
CCNF-202ENST00000397066 HMGN4O00479 90 aa13.91□□□□□ -0.18
CCNF-202ENST00000397066 FRS3O43559 492 aa13.91□□□□□ -0.18
CCNF-202ENST00000397066 OR1F1O43749 312 aa13.91□□□□□ -0.18
CCNF-202ENST00000397066 TIMP2P16035 220 aa13.91□□□□□ -0.18
CCNF-202ENST00000397066 NTSP30990 170 aa13.91□□□□□ -0.18
CCNF-202ENST00000397066 SSR2P43308 183 aa13.91□□□□□ -0.18
CCNF-202ENST00000397066 NCBP2P52298 156 aaKnown RBP eCLIP13.91□□□□□ -0.18
CCNF-202ENST00000397066 SF3A2Q15428 464 aaKnown RBP13.91□□□□□ -0.18
CCNF-202ENST00000397066 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.91□□□□□ -0.186e-6■□□□□ 8.6
CCNF-202ENST00000397066 TJAP1Q5JTD0 557 aa13.91□□□□□ -0.18
CCNF-202ENST00000397066 HENMT1Q5T8I9 393 aaKnown RBP13.91□□□□□ -0.18
CCNF-202ENST00000397066 KLBQ86Z14 1044 aa13.91□□□□□ -0.18
CCNF-202ENST00000397066 DNAJC5GQ8N7S2 189 aa13.91□□□□□ -0.18
CCNF-202ENST00000397066 TMEM163Q8TC26 289 aa13.91□□□□□ -0.18
CCNF-202ENST00000397066 ZNF431Q8TF32 576 aaPredicted RBP13.91□□□□□ -0.18
CCNF-202ENST00000397066 ZNF689Q96CS4 500 aaPredicted RBP13.91□□□□□ -0.18
CCNF-202ENST00000397066 WFDC6Q9BQY6 131 aa13.91□□□□□ -0.18
CCNF-202ENST00000397066 NIPAL2Q9H841 368 aa13.91□□□□□ -0.18
CCNF-202ENST00000397066 GREM1O60565 184 aa13.91□□□□□ -0.18
CCNF-202ENST00000397066 ANXA11P50995 505 aaKnown RBP13.91□□□□□ -0.18
CCNF-202ENST00000397066 ST8SIA6P61647 398 aa13.91□□□□□ -0.18
CCNF-202ENST00000397066 LASP1Q14847 261 aaKnown RBP13.91□□□□□ -0.18
CCNF-202ENST00000397066 BCL2L15Q5TBC7 163 aa13.91□□□□□ -0.18
CCNF-202ENST00000397066 SECISBP2Q96T21 854 aaKnown RBP13.91□□□□□ -0.18
CCNF-202ENST00000397066 UCKL1Q9NWZ5 548 aa13.91□□□□□ -0.18
CCNF-202ENST00000397066 ZFR2Q9UPR6 939 aaKnown RBP13.91□□□□□ -0.18
CCNF-202ENST00000397066 PCDHGB7Q9Y5F8 929 aa13.91□□□□□ -0.18
CCNF-202ENST00000397066 TRPM7Q96QT4 1865 aa13.9□□□□□ -0.18
CCNF-202ENST00000397066 WDR45BQ5MNZ6 344 aa13.9□□□□□ -0.18
CCNF-202ENST00000397066 KHDRBS2Q5VWX1 349 aaKnown RBP13.9□□□□□ -0.18
CCNF-202ENST00000397066 SLC30A6Q6NXT4 461 aa13.9□□□□□ -0.18
CCNF-202ENST00000397066 GHDCQ8N2G8 530 aa13.9□□□□□ -0.18
CCNF-202ENST00000397066 FAM46AQ96IP4 442 aaKnown RBP13.9□□□□□ -0.18
CCNF-202ENST00000397066 IL36AQ9UHA7 158 aa13.9□□□□□ -0.18
CCNF-202ENST00000397066 ABT1Q9ULW3 272 aaKnown RBP13.9□□□□□ -0.18
CCNF-202ENST00000397066 H7BY64 318 aa13.9□□□□□ -0.18
CCNF-202ENST00000397066 ATP12AP54707 1039 aa13.9□□□□□ -0.18
CCNF-202ENST00000397066 DSG2Q14126 1118 aa13.9□□□□□ -0.18
CCNF-202ENST00000397066 ANGPT1Q15389 498 aa13.9□□□□□ -0.18
CCNF-202ENST00000397066 ZNF697Q5TEC3 545 aa13.9□□□□□ -0.18
CCNF-202ENST00000397066 ANKRD54Q6NXT1 300 aa13.9□□□□□ -0.18
CCNF-202ENST00000397066 QSOX2Q6ZRP7 698 aa13.9□□□□□ -0.18
CCNF-202ENST00000397066 LINC00471Q8N535 108 aa13.9□□□□□ -0.18
CCNF-202ENST00000397066 OR6T1Q8NGN1 323 aa13.9□□□□□ -0.18
CCNF-202ENST00000397066 RAD51AP1Q96B01 352 aa13.9□□□□□ -0.18
CCNF-202ENST00000397066 PRAP1Q96NZ9 151 aa13.9□□□□□ -0.18
CCNF-202ENST00000397066 ABCG5Q9H222 651 aa13.9□□□□□ -0.18
CCNF-202ENST00000397066 PPIL3Q9H2H8 161 aaKnown RBP13.9□□□□□ -0.18
CCNF-202ENST00000397066 SLAMF7Q9NQ25 335 aa13.9□□□□□ -0.18
CCNF-202ENST00000397066 PAK6Q9NQU5 681 aaPredicted RBP13.9□□□□□ -0.18
CCNF-202ENST00000397066 DIABLOQ9NR28 239 aa13.9□□□□□ -0.18
CCNF-202ENST00000397066 TYRP14679 529 aa13.9□□□□□ -0.18
CCNF-202ENST00000397066 INSL4Q14641 139 aa13.9□□□□□ -0.18
CCNF-202ENST00000397066 SMUG1Q53HV7 270 aa13.9□□□□□ -0.18
CCNF-202ENST00000397066 ZNF628Q5EBL2 1059 aa13.9□□□□□ -0.18
CCNF-202ENST00000397066 FAM205BPQ63HN1 556 aa13.9□□□□□ -0.18
CCNF-202ENST00000397066 NUDT13Q86X67 352 aa13.9□□□□□ -0.18
CCNF-202ENST00000397066 HYLS1Q96M11 299 aa13.9□□□□□ -0.18
CCNF-202ENST00000397066 PLA2G12AQ9BZM1 189 aa13.9□□□□□ -0.18
CCNF-202ENST00000397066 ENAMQ9NRM1 1142 aa13.9□□□□□ -0.18
CCNF-202ENST00000397066 STK25O00506 426 aa13.9□□□□□ -0.19
CCNF-202ENST00000397066 GABRPO00591 440 aa13.9□□□□□ -0.19
CCNF-202ENST00000397066 PLPP1O14494 284 aa13.9□□□□□ -0.19
CCNF-202ENST00000397066 CDC73Q6P1J9 531 aa13.9□□□□□ -0.19
CCNF-202ENST00000397066 TMCO2Q7Z6W1 182 aaPredicted RBP13.9□□□□□ -0.19
CCNF-202ENST00000397066 PIGXQ8TBF5 258 aa13.9□□□□□ -0.19
CCNF-202ENST00000397066 UPRTQ96BW1 309 aa13.9□□□□□ -0.19
CCNF-202ENST00000397066 QRSL1Q9H0R6 528 aaKnown RBP13.9□□□□□ -0.19
CCNF-202ENST00000397066 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.89□□□□□ -0.19
CCNF-202ENST00000397066 TRIM3O75382 744 aaPredicted RBP13.89□□□□□ -0.19
CCNF-202ENST00000397066 ZSWIM7Q19AV6 140 aa13.89□□□□□ -0.19
CCNF-202ENST00000397066 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.89□□□□□ -0.192e-6■■■■□ 19.7
CCNF-202ENST00000397066 TMEM43Q9BTV4 400 aa13.89□□□□□ -0.19
CCNF-202ENST00000397066 KLHL28Q9NXS3 571 aa13.89□□□□□ -0.19
CCNF-202ENST00000397066 PRR23AA6NEV1 266 aa13.89□□□□□ -0.19
CCNF-202ENST00000397066 RECKO95980 971 aa13.89□□□□□ -0.19
CCNF-202ENST00000397066 SLC1A3P43003 542 aa13.89□□□□□ -0.19
CCNF-202ENST00000397066 TPBGQ13641 420 aa13.89□□□□□ -0.19
CCNF-202ENST00000397066 RAB33AQ14088 237 aa13.89□□□□□ -0.19
CCNF-202ENST00000397066 KLHL12Q53G59 568 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms