RNA–Protein interactions for RNA: ENST00000396861.5

GAPDH-205, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene GAPDH, Length 1,348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-205ENST00000396861 PLOD3O60568 738 aa11.9□□□□□ -0.5
GAPDH-205ENST00000396861 VPS4BO75351 444 aa11.9□□□□□ -0.5
GAPDH-205ENST00000396861 SLC25A12O75746 678 aa11.9□□□□□ -0.5
GAPDH-205ENST00000396861 TROVE2P10155 538 aaKnown RBP eCLIP11.9□□□□□ -0.53e-6■■■■■ 28.8
GAPDH-205ENST00000396861 CD46P15529 392 aa11.9□□□□□ -0.5
GAPDH-205ENST00000396861 EPHA3P29320 983 aa11.9□□□□□ -0.5
GAPDH-205ENST00000396861 NTSP30990 170 aa11.9□□□□□ -0.5
GAPDH-205ENST00000396861 FRKP42685 505 aaPredicted RBP11.9□□□□□ -0.5
GAPDH-205ENST00000396861 EMDP50402 254 aa11.9□□□□□ -0.5
GAPDH-205ENST00000396861 NR0B1P51843 470 aaKnown RBP11.9□□□□□ -0.5
GAPDH-205ENST00000396861 IGFBP7Q16270 282 aa11.9□□□□□ -0.5
GAPDH-205ENST00000396861 SLC9B1Q4ZJI4 515 aa11.9□□□□□ -0.5
GAPDH-205ENST00000396861 ZNF551Q7Z340 670 aaPredicted RBP11.9□□□□□ -0.5
GAPDH-205ENST00000396861 GALNTL5Q7Z4T8 443 aa11.9□□□□□ -0.5
GAPDH-205ENST00000396861 MDGA2Q7Z553 956 aa11.9□□□□□ -0.5
GAPDH-205ENST00000396861 R3HCC1LQ7Z5L2 792 aaKnown RBP11.9□□□□□ -0.5
GAPDH-205ENST00000396861 CYP4Z2PQ8N1L4 340 aa11.9□□□□□ -0.5
GAPDH-205ENST00000396861 SLC15A4Q8N697 577 aa11.9□□□□□ -0.5
GAPDH-205ENST00000396861 HORMAD2Q8N7B1 307 aa11.9□□□□□ -0.5
GAPDH-205ENST00000396861 OR7A2PQ8NGA2 310 aa11.9□□□□□ -0.5
GAPDH-205ENST00000396861 ASB15Q8WXK1 588 aa11.9□□□□□ -0.5
GAPDH-205ENST00000396861 TP53INP1Q96A56 240 aa11.9□□□□□ -0.5
GAPDH-205ENST00000396861 MIB2Q96AX9 1013 aa11.9□□□□□ -0.5
GAPDH-205ENST00000396861 ERP27Q96DN0 273 aa11.9□□□□□ -0.5
GAPDH-205ENST00000396861 MS4A3Q96HJ5 214 aa11.9□□□□□ -0.5
GAPDH-205ENST00000396861 MAELQ96JY0 434 aaKnown RBP11.9□□□□□ -0.5
GAPDH-205ENST00000396861 ITPAQ9BY32 194 aa11.9□□□□□ -0.5
GAPDH-205ENST00000396861 RABEP2Q9H5N1 569 aa11.9□□□□□ -0.5
GAPDH-205ENST00000396861 FGFR1OP2Q9NVK5 253 aa11.9□□□□□ -0.5
GAPDH-205ENST00000396861 HPF1Q9NWY4 346 aa11.9□□□□□ -0.5
GAPDH-205ENST00000396861 CFL2Q9Y281 166 aa11.9□□□□□ -0.5
GAPDH-205ENST00000396861 C2CD3Q4AC94 2353 aa11.9□□□□□ -0.5
GAPDH-205ENST00000396861 TRPC5OSA6NMA1 111 aa11.89□□□□□ -0.51
GAPDH-205ENST00000396861 PLOD2O00469 737 aa11.89□□□□□ -0.51
GAPDH-205ENST00000396861 NME2P1O60361 137 aa11.89□□□□□ -0.51
GAPDH-205ENST00000396861 EDF1O60869 148 aaKnown RBP11.89□□□□□ -0.51
GAPDH-205ENST00000396861 NME6O75414 186 aaPredicted RBP11.89□□□□□ -0.51
GAPDH-205ENST00000396861 BCAS2O75934 225 aaPredicted RBP11.89□□□□□ -0.51
GAPDH-205ENST00000396861 ALDOCP09972 364 aaKnown RBP11.89□□□□□ -0.51
GAPDH-205ENST00000396861 LAMP1P11279 417 aa11.89□□□□□ -0.51
GAPDH-205ENST00000396861 NME2P22392 152 aa11.89□□□□□ -0.51
GAPDH-205ENST00000396861 HPCAL1P37235 193 aa11.89□□□□□ -0.51
GAPDH-205ENST00000396861 RPL3P39023 403 aaKnown RBP11.89□□□□□ -0.51
GAPDH-205ENST00000396861 MC3RP41968 323 aa11.89□□□□□ -0.51
GAPDH-205ENST00000396861 CLDN8P56748 225 aa11.89□□□□□ -0.51
GAPDH-205ENST00000396861 C21orf58P58505 322 aa11.89□□□□□ -0.51
GAPDH-205ENST00000396861 FOXK1P85037 733 aa11.89□□□□□ -0.51
GAPDH-205ENST00000396861 GTF3C1Q12789 2109 aa11.89□□□□□ -0.51
GAPDH-205ENST00000396861 SF3A3Q12874 501 aaKnown RBP eCLIP11.89□□□□□ -0.519e-7■■■■□ 21.8
GAPDH-205ENST00000396861 ESPL1Q14674 2120 aa11.89□□□□□ -0.51
GAPDH-205ENST00000396861 MAPKAPK3Q16644 382 aa11.89□□□□□ -0.51
GAPDH-205ENST00000396861 HLA-DQA1Q5Y7H0 255 aa11.89□□□□□ -0.51
GAPDH-205ENST00000396861 OGFOD2Q6N063 350 aa11.89□□□□□ -0.51
GAPDH-205ENST00000396861 OPN5Q6U736 354 aa11.89□□□□□ -0.51
GAPDH-205ENST00000396861 TMEM107Q6UX40 140 aa11.89□□□□□ -0.51
GAPDH-205ENST00000396861 GPALPP1Q8IXQ4 340 aa11.89□□□□□ -0.51
GAPDH-205ENST00000396861 TMEM178AQ8NBL3 297 aa11.89□□□□□ -0.51
GAPDH-205ENST00000396861 SLC22A8Q8TCC7 542 aa11.89□□□□□ -0.51
GAPDH-205ENST00000396861 GRHL3Q8TE85 626 aa11.89□□□□□ -0.51
GAPDH-205ENST00000396861 COQ8BQ96D53 544 aa11.89□□□□□ -0.51
GAPDH-205ENST00000396861 ELP4Q96EB1 424 aa11.89□□□□□ -0.51
GAPDH-205ENST00000396861 C5orf34Q96MH7 638 aa11.89□□□□□ -0.51
GAPDH-205ENST00000396861 BARD1Q99728 777 aaKnown RBP11.89□□□□□ -0.51
GAPDH-205ENST00000396861 NXF5Q9H1B4 397 aaKnown RBP11.89□□□□□ -0.51
GAPDH-205ENST00000396861 MAP10Q9P2G4 905 aa11.89□□□□□ -0.51
GAPDH-205ENST00000396861 ERVK-11Q9UQG0 969 aa11.89□□□□□ -0.51
GAPDH-205ENST00000396861 USH1CQ9Y6N9 552 aa11.89□□□□□ -0.51
GAPDH-205ENST00000396861 NCKAP5O14513 1909 aa11.89□□□□□ -0.51
GAPDH-205ENST00000396861 A0A087WV62 115 aa11.88□□□□□ -0.51
GAPDH-205ENST00000396861 UPK1AO00322 258 aa11.88□□□□□ -0.51
GAPDH-205ENST00000396861 ANKRD28O15084 1053 aa11.88□□□□□ -0.51
GAPDH-205ENST00000396861 SLITRK5O94991 958 aa11.88□□□□□ -0.51
GAPDH-205ENST00000396861 RASAL1O95294 804 aa11.88□□□□□ -0.51
GAPDH-205ENST00000396861 EFNA1P20827 205 aaPredicted RBP11.88□□□□□ -0.51
GAPDH-205ENST00000396861 PRPS1L1P21108 318 aa11.88□□□□□ -0.51
GAPDH-205ENST00000396861 MANFP55145 182 aaKnown RBP11.88□□□□□ -0.51
GAPDH-205ENST00000396861 PMP22Q01453 160 aa11.88□□□□□ -0.51
GAPDH-205ENST00000396861 SRSF11Q05519 484 aaKnown RBP11.88□□□□□ -0.51
GAPDH-205ENST00000396861 HSPB3Q12988 150 aa11.88□□□□□ -0.51
GAPDH-205ENST00000396861 INAQ16352 499 aa11.88□□□□□ -0.51
GAPDH-205ENST00000396861 ZNF791Q3KP31 576 aaPredicted RBP11.88□□□□□ -0.51
GAPDH-205ENST00000396861 CPTPQ5TA50 214 aa11.88□□□□□ -0.51
GAPDH-205ENST00000396861 TMEM64Q6YI46 380 aa11.88□□□□□ -0.51
GAPDH-205ENST00000396861 SULF2Q8IWU5 870 aa11.88□□□□□ -0.51
GAPDH-205ENST00000396861 TAGAPQ8N103 731 aa11.88□□□□□ -0.51
GAPDH-205ENST00000396861 C17orf47Q8NEP4 570 aa11.88□□□□□ -0.51
GAPDH-205ENST00000396861 FAR1Q8WVX9 515 aa11.88□□□□□ -0.51
GAPDH-205ENST00000396861 TMEM125Q96AQ2 219 aa11.88□□□□□ -0.51
GAPDH-205ENST00000396861 THOC1Q96FV9 657 aaKnown RBP11.88□□□□□ -0.51
GAPDH-205ENST00000396861 ZNF317Q96PQ6 595 aaPredicted RBP11.88□□□□□ -0.51
GAPDH-205ENST00000396861 ACSS1Q9NUB1 689 aaPredicted RBP11.88□□□□□ -0.51
GAPDH-205ENST00000396861 PRODH2Q9UF12 536 aa11.88□□□□□ -0.51
GAPDH-205ENST00000396861 C19orf53Q9UNZ5 99 aaPredicted RBP11.88□□□□□ -0.51
GAPDH-205ENST00000396861 NPFFR2Q9Y5X5 522 aa11.88□□□□□ -0.51
GAPDH-205ENST00000396861 ASPDHA6ND91 283 aa11.87□□□□□ -0.51
GAPDH-205ENST00000396861 SHOX2O60902 331 aaPredicted RBP11.87□□□□□ -0.51
GAPDH-205ENST00000396861 PSMG1O95456 288 aa11.87□□□□□ -0.51
GAPDH-205ENST00000396861 IFI6P09912 130 aa11.87□□□□□ -0.51
GAPDH-205ENST00000396861 FBXO45P0C2W1 286 aa11.87□□□□□ -0.51
GAPDH-205ENST00000396861 PPICP45877 212 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 131.1 ms