RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 REXO4Q9GZR2 422 aaKnown RBP9.57□□□□□ -0.88
NEDD8-202ENST00000396828 DEFB127Q9H1M4 99 aa9.57□□□□□ -0.88
NEDD8-202ENST00000396828 NPDC1Q9NQX5 325 aaPredicted RBP9.57□□□□□ -0.88
NEDD8-202ENST00000396828 PLSCR2Q9NRY7 297 aa9.57□□□□□ -0.88
NEDD8-202ENST00000396828 AIG1Q9NVV5 245 aa9.57□□□□□ -0.88
NEDD8-202ENST00000396828 TMEM45AQ9NWC5 275 aa9.57□□□□□ -0.88
NEDD8-202ENST00000396828 ARMCX1Q9P291 453 aa9.57□□□□□ -0.88
NEDD8-202ENST00000396828 PPIEQ9UNP9 301 aaKnown RBP9.57□□□□□ -0.88
NEDD8-202ENST00000396828 POLR3HQ9Y535 204 aaPredicted RBP9.57□□□□□ -0.88
NEDD8-202ENST00000396828 CAPN7Q9Y6W3 813 aa9.57□□□□□ -0.88
NEDD8-202ENST00000396828 DNAJC13O75165 2243 aa9.56□□□□□ -0.88
NEDD8-202ENST00000396828 INTS1Q8N201 2190 aaKnown RBP9.56□□□□□ -0.88
NEDD8-202ENST00000396828 A0A088AWK7 358 aa9.56□□□□□ -0.88
NEDD8-202ENST00000396828 GNG14A0A1W2PPG7 69 aa9.56□□□□□ -0.88
NEDD8-202ENST00000396828 G3V3Y1 287 aa9.56□□□□□ -0.88
NEDD8-202ENST00000396828 WWP2O00308 870 aa9.56□□□□□ -0.88
NEDD8-202ENST00000396828 SAP18O00422 153 aaKnown RBP9.56□□□□□ -0.88
NEDD8-202ENST00000396828 CYR61O00622 381 aa9.56□□□□□ -0.88
NEDD8-202ENST00000396828 ERI3O43414 337 aaKnown RBP9.56□□□□□ -0.88
NEDD8-202ENST00000396828 OR2J2O76002 312 aa9.56□□□□□ -0.88
NEDD8-202ENST00000396828 OR6B1O95007 311 aa9.56□□□□□ -0.88
NEDD8-202ENST00000396828 ETHE1O95571 254 aa9.56□□□□□ -0.88
NEDD8-202ENST00000396828 ALDOCP09972 364 aaKnown RBP9.56□□□□□ -0.88
NEDD8-202ENST00000396828 ZNF10P21506 573 aaPredicted RBP9.56□□□□□ -0.88
NEDD8-202ENST00000396828 CERS1P27544 350 aa9.56□□□□□ -0.88
NEDD8-202ENST00000396828 SSTR2P30874 369 aa9.56□□□□□ -0.88
NEDD8-202ENST00000396828 TIA1P31483 386 aaKnown RBP eCLIP9.56□□□□□ -0.88
NEDD8-202ENST00000396828 MRPL19P49406 292 aaKnown RBP9.56□□□□□ -0.88
NEDD8-202ENST00000396828 PLA2G16P53816 162 aa9.56□□□□□ -0.88
NEDD8-202ENST00000396828 DIO3P55073 304 aa9.56□□□□□ -0.88
NEDD8-202ENST00000396828 SKP1P63208 163 aa9.56□□□□□ -0.88
NEDD8-202ENST00000396828 TFF3Q07654 80 aa9.56□□□□□ -0.88
NEDD8-202ENST00000396828 TBL3Q12788 808 aaKnown RBP9.56□□□□□ -0.88
NEDD8-202ENST00000396828 KRT72Q14CN4 511 aa9.56□□□□□ -0.88
NEDD8-202ENST00000396828 KIAA0040Q15053 153 aa9.56□□□□□ -0.88
NEDD8-202ENST00000396828 MAPRE2Q15555 327 aa9.56□□□□□ -0.88
NEDD8-202ENST00000396828 PDCD4Q53EL6 469 aaKnown RBP9.56□□□□□ -0.88
NEDD8-202ENST00000396828 FAM91A1Q658Y4 838 aa9.56□□□□□ -0.88
NEDD8-202ENST00000396828 NOXRED1Q6NXP6 359 aa9.56□□□□□ -0.88
NEDD8-202ENST00000396828 TRIM40Q6P9F5 258 aa9.56□□□□□ -0.88
NEDD8-202ENST00000396828 CYP20A1Q6UW02 462 aa9.56□□□□□ -0.88
NEDD8-202ENST00000396828 ZNF771Q7L3S4 317 aaPredicted RBP9.56□□□□□ -0.88
NEDD8-202ENST00000396828 NUDT13Q86X67 352 aa9.56□□□□□ -0.88
NEDD8-202ENST00000396828 CCDC71Q8IV32 467 aaPredicted RBP9.56□□□□□ -0.88
NEDD8-202ENST00000396828 LIX1Q8N485 282 aa9.56□□□□□ -0.88
NEDD8-202ENST00000396828 TMEM156Q8N614 296 aa9.56□□□□□ -0.88
NEDD8-202ENST00000396828 OR2L5Q8NG80 312 aa9.56□□□□□ -0.88
NEDD8-202ENST00000396828 CMTM5Q96DZ9 223 aa9.56□□□□□ -0.88
NEDD8-202ENST00000396828 C14orf79Q96F83 325 aa9.56□□□□□ -0.88
NEDD8-202ENST00000396828 KCNC2Q96PR1 638 aa9.56□□□□□ -0.88
NEDD8-202ENST00000396828 F2RL3Q96RI0 385 aa9.56□□□□□ -0.88
NEDD8-202ENST00000396828 ZBTB18Q99592 522 aa9.56□□□□□ -0.88
NEDD8-202ENST00000396828 CCDC106Q9BWC9 280 aa9.56□□□□□ -0.88
NEDD8-202ENST00000396828 BRINP2Q9C0B6 783 aa9.56□□□□□ -0.88
NEDD8-202ENST00000396828 ROGDIQ9GZN7 287 aa9.56□□□□□ -0.88
NEDD8-202ENST00000396828 ZNF385DQ9H6B1 395 aa9.56□□□□□ -0.88
NEDD8-202ENST00000396828 CLK4Q9HAZ1 481 aaKnown RBP9.56□□□□□ -0.88
NEDD8-202ENST00000396828 PRTFDC1Q9NRG1 225 aa9.56□□□□□ -0.88
NEDD8-202ENST00000396828 SDR39U1Q9NRG7 319 aaPredicted RBP9.56□□□□□ -0.88
NEDD8-202ENST00000396828 SIRT5Q9NXA8 310 aa9.56□□□□□ -0.88
NEDD8-202ENST00000396828 TNFRSF10DQ9UBN6 386 aa9.56□□□□□ -0.88
NEDD8-202ENST00000396828 ADAM29Q9UKF5 820 aa9.56□□□□□ -0.88
NEDD8-202ENST00000396828 MAPRE3Q9UPY8 281 aa9.56□□□□□ -0.88
NEDD8-202ENST00000396828 RNF6Q9Y252 685 aa9.56□□□□□ -0.88
NEDD8-202ENST00000396828 KLF13Q9Y2Y9 288 aaPredicted RBP9.56□□□□□ -0.88
NEDD8-202ENST00000396828 GPR45Q9Y5Y3 372 aa9.56□□□□□ -0.88
NEDD8-202ENST00000396828 ERICH4A6NGS2 130 aa9.55□□□□□ -0.88
NEDD8-202ENST00000396828 FAM90A27PA6NNH2 459 aa9.55□□□□□ -0.88
NEDD8-202ENST00000396828 FAM166BA8MTA8 275 aa9.55□□□□□ -0.88
NEDD8-202ENST00000396828 KLRC4-KLRK1H3BQV0 150 aa9.55□□□□□ -0.88
NEDD8-202ENST00000396828 PLPP1O14494 284 aa9.55□□□□□ -0.88
NEDD8-202ENST00000396828 CDK2AP1O14519 115 aa9.55□□□□□ -0.88
NEDD8-202ENST00000396828 PCDH7O60245 1069 aa9.55□□□□□ -0.88
NEDD8-202ENST00000396828 SLC22A3O75751 556 aa9.55□□□□□ -0.88
NEDD8-202ENST00000396828 ANXA4P09525 319 aaPredicted RBP9.55□□□□□ -0.88
NEDD8-202ENST00000396828 G6PDP11413 515 aa9.55□□□□□ -0.88
NEDD8-202ENST00000396828 BCKDHAP12694 445 aa9.55□□□□□ -0.88
NEDD8-202ENST00000396828 IGFBP2P18065 325 aa9.55□□□□□ -0.88
NEDD8-202ENST00000396828 PRDX6P30041 224 aa9.55□□□□□ -0.88
NEDD8-202ENST00000396828 SOX3P41225 446 aa9.55□□□□□ -0.88
NEDD8-202ENST00000396828 SSR2P43308 183 aa9.55□□□□□ -0.88
NEDD8-202ENST00000396828 GSTM5P46439 218 aa9.55□□□□□ -0.88
NEDD8-202ENST00000396828 ASMTP46597 345 aa9.55□□□□□ -0.88
NEDD8-202ENST00000396828 SSR4P51571 173 aa9.55□□□□□ -0.88
NEDD8-202ENST00000396828 MNAT1P51948 309 aa9.55□□□□□ -0.88
NEDD8-202ENST00000396828 LIM2P55344 173 aa9.55□□□□□ -0.88
NEDD8-202ENST00000396828 HSD17B7P56937 341 aa9.55□□□□□ -0.88
NEDD8-202ENST00000396828 RAB38P57729 211 aa9.55□□□□□ -0.88
NEDD8-202ENST00000396828 KLF10Q13118 480 aa9.55□□□□□ -0.88
NEDD8-202ENST00000396828 SLC13A2Q13183 592 aa9.55□□□□□ -0.88
NEDD8-202ENST00000396828 ZNF750Q32MQ0 723 aa9.55□□□□□ -0.88
NEDD8-202ENST00000396828 ADPRMQ3LIE5 342 aa9.55□□□□□ -0.88
NEDD8-202ENST00000396828 AGKQ53H12 422 aa9.55□□□□□ -0.88
NEDD8-202ENST00000396828 CCNYL2Q5T2Q4 361 aa9.55□□□□□ -0.88
NEDD8-202ENST00000396828 OR4C11Q6IEV9 310 aa9.55□□□□□ -0.88
NEDD8-202ENST00000396828 NIPAL1Q6NVV3 410 aa9.55□□□□□ -0.88
NEDD8-202ENST00000396828 GALNT18Q6P9A2 607 aa9.55□□□□□ -0.88
NEDD8-202ENST00000396828 IL20RBQ6UXL0 311 aa9.55□□□□□ -0.88
NEDD8-202ENST00000396828 COMMD6Q7Z4G1 85 aa9.55□□□□□ -0.88
NEDD8-202ENST00000396828 UBE3DQ7Z6J8 389 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms