RNA–Protein interactions for RNA: ENST00000396653.2

AP1S3-202, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4 BASIC

Gene AP1S3, Length 589 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-202ENST00000396653 ZCCHC12Q6PEW1 402 aa15.21■□□□□ 0.03
AP1S3-202ENST00000396653 BHLHB9Q6PI77 547 aa15.21■□□□□ 0.03
AP1S3-202ENST00000396653 LSM14AQ8ND56 463 aaKnown RBP15.21■□□□□ 0.03
AP1S3-202ENST00000396653 SLC22A8Q8TCC7 542 aa15.21■□□□□ 0.03
AP1S3-202ENST00000396653 HOXB13Q92826 284 aaPredicted RBP15.21■□□□□ 0.03
AP1S3-202ENST00000396653 GIMAP5Q96F15 307 aa15.21■□□□□ 0.03
AP1S3-202ENST00000396653 ITCHQ96J02 903 aa15.21■□□□□ 0.03
AP1S3-202ENST00000396653 BTBD9Q96Q07 612 aa15.21■□□□□ 0.03
AP1S3-202ENST00000396653 PANX1Q96RD7 426 aa15.21■□□□□ 0.03
AP1S3-202ENST00000396653 UBL7Q96S82 380 aaPredicted RBP15.21■□□□□ 0.03
AP1S3-202ENST00000396653 LMF2Q9BU23 707 aaKnown RBP15.21■□□□□ 0.03
AP1S3-202ENST00000396653 ITPAQ9BY32 194 aa15.21■□□□□ 0.03
AP1S3-202ENST00000396653 NMUR2Q9GZQ4 415 aa15.21■□□□□ 0.03
AP1S3-202ENST00000396653 ANKRA2Q9H9E1 313 aa15.21■□□□□ 0.03
AP1S3-202ENST00000396653 FOLH1BQ9HBA9 442 aa15.21■□□□□ 0.03
AP1S3-202ENST00000396653 SLC52A3Q9NQ40 469 aa15.21■□□□□ 0.03
AP1S3-202ENST00000396653 SERHLQ9NQF3 203 aa15.21■□□□□ 0.03
AP1S3-202ENST00000396653 ZCCHC3Q9NUD5 404 aaKnown RBP15.21■□□□□ 0.03
AP1S3-202ENST00000396653 ARL2BPQ9Y2Y0 163 aa15.21■□□□□ 0.03
AP1S3-202ENST00000396653 CAPN7Q9Y6W3 813 aa15.21■□□□□ 0.03
AP1S3-202ENST00000396653 LOC400499M0QZD8 3231 aa15.21■□□□□ 0.03
AP1S3-202ENST00000396653 A0A1W2PP18 115 aa15.2■□□□□ 0.02
AP1S3-202ENST00000396653 FRG2CA6NGY1 282 aa15.2■□□□□ 0.02
AP1S3-202ENST00000396653 ACOX3O15254 700 aa15.2■□□□□ 0.02
AP1S3-202ENST00000396653 ERN1O75460 977 aaKnown RBP15.2■□□□□ 0.02
AP1S3-202ENST00000396653 ITGA10O75578 1167 aa15.2■□□□□ 0.02
AP1S3-202ENST00000396653 CPSF4O95639 269 aaKnown RBP15.2■□□□□ 0.02
AP1S3-202ENST00000396653 ZCCHC18P0CG32 403 aa15.2■□□□□ 0.02
AP1S3-202ENST00000396653 CAPN3P20807 821 aa15.2■□□□□ 0.02
AP1S3-202ENST00000396653 DRD5P21918 477 aa15.2■□□□□ 0.02
AP1S3-202ENST00000396653 UQCRC2P22695 453 aa15.2■□□□□ 0.02
AP1S3-202ENST00000396653 SOAT1P35610 550 aa15.2■□□□□ 0.02
AP1S3-202ENST00000396653 PPICP45877 212 aa15.2■□□□□ 0.02
AP1S3-202ENST00000396653 TRPC1P48995 793 aa15.2■□□□□ 0.02
AP1S3-202ENST00000396653 CCT3P49368 545 aaKnown RBP15.2■□□□□ 0.02
AP1S3-202ENST00000396653 PRIM2P49643 509 aa15.2■□□□□ 0.02
AP1S3-202ENST00000396653 SSR4P51571 173 aa15.2■□□□□ 0.02
AP1S3-202ENST00000396653 ZNF155Q12901 538 aaPredicted RBP15.2■□□□□ 0.02
AP1S3-202ENST00000396653 KLF10Q13118 480 aa15.2■□□□□ 0.02
AP1S3-202ENST00000396653 UBAP2LQ14157 1087 aaKnown RBP15.2■□□□□ 0.02
AP1S3-202ENST00000396653 SPDYE7PQ495Y7 208 aa15.2■□□□□ 0.02
AP1S3-202ENST00000396653 LACTB2Q53H82 288 aaPredicted RBP15.2■□□□□ 0.02
AP1S3-202ENST00000396653 PIGGQ5H8A4 983 aa15.2■□□□□ 0.02
AP1S3-202ENST00000396653 GK5Q6ZS86 529 aa15.2■□□□□ 0.02
AP1S3-202ENST00000396653 GPALPP1Q8IXQ4 340 aa15.2■□□□□ 0.02
AP1S3-202ENST00000396653 DND1Q8IYX4 353 aaKnown RBP15.2■□□□□ 0.02
AP1S3-202ENST00000396653 TAGAPQ8N103 731 aa15.2■□□□□ 0.02
AP1S3-202ENST00000396653 BEST3Q8N1M1 668 aa15.2■□□□□ 0.02
AP1S3-202ENST00000396653 TRIML2Q8N7C3 387 aa15.2■□□□□ 0.02
AP1S3-202ENST00000396653 ANKS4BQ8N8V4 417 aa15.2■□□□□ 0.02
AP1S3-202ENST00000396653 THAP3Q8WTV1 239 aaPredicted RBP15.2■□□□□ 0.02
AP1S3-202ENST00000396653 VPS33AQ96AX1 596 aa15.2■□□□□ 0.02
AP1S3-202ENST00000396653 HSPBAP1Q96EW2 488 aa15.2■□□□□ 0.02
AP1S3-202ENST00000396653 MAGED4Q96JG8 741 aa15.2■□□□□ 0.02
AP1S3-202ENST00000396653 LCORQ96JN0 433 aaPredicted RBP15.2■□□□□ 0.02
AP1S3-202ENST00000396653 RASL10BQ96S79 203 aa15.2■□□□□ 0.02
AP1S3-202ENST00000396653 TRIM45Q9H8W5 580 aaPredicted RBP15.2■□□□□ 0.02
AP1S3-202ENST00000396653 STMN3Q9NZ72 180 aa15.2■□□□□ 0.02
AP1S3-202ENST00000396653 VPS4AQ9UN37 437 aa15.2■□□□□ 0.02
AP1S3-202ENST00000396653 ERVK-11Q9UQG0 969 aa15.2■□□□□ 0.02
AP1S3-202ENST00000396653 TP53TG5Q9Y2B4 290 aa15.2■□□□□ 0.02
AP1S3-202ENST00000396653 DTX4Q9Y2E6 619 aa15.2■□□□□ 0.02
AP1S3-202ENST00000396653 SNX8Q9Y5X2 465 aa15.2■□□□□ 0.02
AP1S3-202ENST00000396653 ZZEF1O43149 2961 aa15.2■□□□□ 0.02
AP1S3-202ENST00000396653 MGAQ8IWI9 3026 aa15.19■□□□□ 0.02
AP1S3-202ENST00000396653 RNF103-CHMP3A0A140T963 221 aa15.19■□□□□ 0.02
AP1S3-202ENST00000396653 WWP2O00308 870 aa15.19■□□□□ 0.02
AP1S3-202ENST00000396653 RFXANKO14593 260 aa15.19■□□□□ 0.02
AP1S3-202ENST00000396653 TO15178 435 aa15.19■□□□□ 0.02
AP1S3-202ENST00000396653 MAN1A2O60476 641 aa15.19■□□□□ 0.02
AP1S3-202ENST00000396653 DPM1O60762 260 aa15.19■□□□□ 0.02
AP1S3-202ENST00000396653 NADKO95544 446 aaPredicted RBP15.19■□□□□ 0.02
AP1S3-202ENST00000396653 SNRPB2P08579 225 aaKnown RBP15.19■□□□□ 0.02
AP1S3-202ENST00000396653 KRT16P08779 473 aa15.19■□□□□ 0.02
AP1S3-202ENST00000396653 CASRP41180 1078 aa15.19■□□□□ 0.02
AP1S3-202ENST00000396653 TLR1Q15399 786 aa15.19■□□□□ 0.02
AP1S3-202ENST00000396653 ZNHIT3Q15649 155 aaPredicted RBP15.19■□□□□ 0.02
AP1S3-202ENST00000396653 VPS26BQ4G0F5 336 aa15.19■□□□□ 0.02
AP1S3-202ENST00000396653 EXOSC6Q5RKV6 272 aaKnown RBP15.19■□□□□ 0.02
AP1S3-202ENST00000396653 GKAP1Q5VSY0 366 aaPredicted RBP15.19■□□□□ 0.02
AP1S3-202ENST00000396653 MFSD12Q6NUT3 480 aa15.19■□□□□ 0.02
AP1S3-202ENST00000396653 OPN5Q6U736 354 aa15.19■□□□□ 0.02
AP1S3-202ENST00000396653 PCSK4Q6UW60 755 aa15.19■□□□□ 0.02
AP1S3-202ENST00000396653 LINC00696Q6ZRV3 163 aa15.19■□□□□ 0.02
AP1S3-202ENST00000396653 SZRD1Q7Z422 152 aa15.19■□□□□ 0.02
AP1S3-202ENST00000396653 EXD3Q8N9H8 876 aa15.19■□□□□ 0.02
AP1S3-202ENST00000396653 CDRT4Q8N9R6 151 aa15.19■□□□□ 0.02
AP1S3-202ENST00000396653 DNAJB8Q8NHS0 232 aa15.19■□□□□ 0.02
AP1S3-202ENST00000396653 GTF2H4Q92759 462 aa15.19■□□□□ 0.02
AP1S3-202ENST00000396653 HAS2Q92819 552 aa15.19■□□□□ 0.02
AP1S3-202ENST00000396653 PHF12Q96QT6 1004 aa15.19■□□□□ 0.02
AP1S3-202ENST00000396653 INPP5KQ9BT40 448 aa15.19■□□□□ 0.02
AP1S3-202ENST00000396653 NXF5Q9H1B4 397 aaKnown RBP15.19■□□□□ 0.02
AP1S3-202ENST00000396653 MYLK2Q9H1R3 596 aa15.19■□□□□ 0.02
AP1S3-202ENST00000396653 LEF1Q9UJU2 399 aaPredicted RBP15.19■□□□□ 0.02
AP1S3-202ENST00000396653 GPR55Q9Y2T6 319 aaPredicted RBP15.19■□□□□ 0.02
AP1S3-202ENST00000396653 ASPDHA6ND91 283 aa15.18■□□□□ 0.02
AP1S3-202ENST00000396653 OR5H15A6NDH6 313 aa15.18■□□□□ 0.02
AP1S3-202ENST00000396653 BBIP1A8MTZ0 92 aa15.18■□□□□ 0.02
AP1S3-202ENST00000396653 ATXN7O15265 892 aaPredicted RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms