RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 LGI1O95970 557 aa14.04□□□□□ -0.16
CBX3-202ENST00000396386 AGR2O95994 175 aa14.04□□□□□ -0.16
CBX3-202ENST00000396386 GASTP01350 101 aa14.04□□□□□ -0.16
CBX3-202ENST00000396386 CPMP14384 443 aa14.04□□□□□ -0.16
CBX3-202ENST00000396386 MASP1P48740 699 aa14.04□□□□□ -0.16
CBX3-202ENST00000396386 CDC42P60953 191 aa14.04□□□□□ -0.16
CBX3-202ENST00000396386 SEC23BQ15437 767 aa14.04□□□□□ -0.16
CBX3-202ENST00000396386 SMAD2Q15796 467 aaKnown RBP14.04□□□□□ -0.16
CBX3-202ENST00000396386 FAM214AQ32MH5 1076 aa14.04□□□□□ -0.16
CBX3-202ENST00000396386 MFSD12Q6NUT3 480 aa14.04□□□□□ -0.16
CBX3-202ENST00000396386 CDC73Q6P1J9 531 aa14.04□□□□□ -0.16
CBX3-202ENST00000396386 DHRS4L2Q6PKH6 230 aa14.04□□□□□ -0.16
CBX3-202ENST00000396386 CCDC81Q6ZN84 652 aa14.04□□□□□ -0.16
CBX3-202ENST00000396386 USP53Q70EK8 1073 aa14.04□□□□□ -0.16
CBX3-202ENST00000396386 OR7G2Q8NG99 324 aa14.04□□□□□ -0.16
CBX3-202ENST00000396386 RHOXF1Q8NHV9 184 aa14.04□□□□□ -0.16
CBX3-202ENST00000396386 PRRC1Q96M27 445 aa14.04□□□□□ -0.16
CBX3-202ENST00000396386 FNDC11Q9BVV2 318 aa14.04□□□□□ -0.16
CBX3-202ENST00000396386 FUNDC2Q9BWH2 189 aa14.04□□□□□ -0.16
CBX3-202ENST00000396386 UCK2Q9BZX2 261 aa14.04□□□□□ -0.16
CBX3-202ENST00000396386 SLC38A1Q9H2H9 487 aa14.04□□□□□ -0.16
CBX3-202ENST00000396386 SEMA6CQ9H3T2 930 aa14.04□□□□□ -0.16
CBX3-202ENST00000396386 TRIM45Q9H8W5 580 aaPredicted RBP14.04□□□□□ -0.16
CBX3-202ENST00000396386 ANKRA2Q9H9E1 313 aa14.04□□□□□ -0.16
CBX3-202ENST00000396386 PTGFRNQ9P2B2 879 aa14.04□□□□□ -0.16
CBX3-202ENST00000396386 A4GNTQ9UNA3 340 aa14.04□□□□□ -0.16
CBX3-202ENST00000396386 NINQ8N4C6 2090 aa14.03□□□□□ -0.16
CBX3-202ENST00000396386 DUXAA6NLW8 204 aa14.03□□□□□ -0.16
CBX3-202ENST00000396386 ZAR1LA6NP61 321 aa14.03□□□□□ -0.16
CBX3-202ENST00000396386 OR10H3O60404 316 aa14.03□□□□□ -0.16
CBX3-202ENST00000396386 EPPINO95925 133 aa14.03□□□□□ -0.16
CBX3-202ENST00000396386 MAP2K4P45985 399 aa14.03□□□□□ -0.16
CBX3-202ENST00000396386 CRISP1P54107 249 aa14.03□□□□□ -0.16
CBX3-202ENST00000396386 PPP1CAP62136 330 aa14.03□□□□□ -0.16
CBX3-202ENST00000396386 GAS6Q14393 721 aa14.03□□□□□ -0.16
CBX3-202ENST00000396386 MLIPQ5VWP3 458 aa14.03□□□□□ -0.16
CBX3-202ENST00000396386 HMGN2P46Q86SG4 172 aa14.03□□□□□ -0.16
CBX3-202ENST00000396386 CCDC103Q8IW40 242 aa14.03□□□□□ -0.16
CBX3-202ENST00000396386 AVL9Q8NBF6 648 aa14.03□□□□□ -0.16
CBX3-202ENST00000396386 ADAMTS15Q8TE58 950 aa14.03□□□□□ -0.16
CBX3-202ENST00000396386 COL26A1Q96A83 441 aa14.03□□□□□ -0.16
CBX3-202ENST00000396386 SIGLEC11Q96RL6 698 aa14.03□□□□□ -0.16
CBX3-202ENST00000396386 WFDC6Q9BQY6 131 aa14.03□□□□□ -0.16
CBX3-202ENST00000396386 FUZQ9BT04 418 aa14.03□□□□□ -0.16
CBX3-202ENST00000396386 GPN2Q9H9Y4 310 aaPredicted RBP14.03□□□□□ -0.16
CBX3-202ENST00000396386 ZNF226Q9NYT6 803 aa14.03□□□□□ -0.16
CBX3-202ENST00000396386 ENPP5Q9UJA9 477 aa14.03□□□□□ -0.16
CBX3-202ENST00000396386 SLC13A4Q9UKG4 626 aa14.03□□□□□ -0.16
CBX3-202ENST00000396386 MRPS17Q9Y2R5 130 aaKnown RBP14.03□□□□□ -0.16
CBX3-202ENST00000396386 TDRD6O60522 2096 aaKnown RBP14.03□□□□□ -0.16
CBX3-202ENST00000396386 A0A1W2PRQ8 180 aa14.02□□□□□ -0.16
CBX3-202ENST00000396386 SH3PXD2BA1X283 911 aa14.02□□□□□ -0.16
CBX3-202ENST00000396386 OSMP13725 252 aa14.02□□□□□ -0.16
CBX3-202ENST00000396386 PORP16435 677 aaPredicted RBP14.02□□□□□ -0.16
CBX3-202ENST00000396386 TYRP1P17643 537 aa14.02□□□□□ -0.16
CBX3-202ENST00000396386 GABRB1P18505 474 aa14.02□□□□□ -0.16
CBX3-202ENST00000396386 CHMP24386 653 aa14.02□□□□□ -0.16
CBX3-202ENST00000396386 CD27P26842 260 aa14.02□□□□□ -0.16
CBX3-202ENST00000396386 CTSKP43235 329 aa14.02□□□□□ -0.16
CBX3-202ENST00000396386 VSX2P58304 361 aaPredicted RBP14.02□□□□□ -0.16
CBX3-202ENST00000396386 NFATC3Q12968 1075 aa14.02□□□□□ -0.16
CBX3-202ENST00000396386 DGCR6Q14129 220 aa14.02□□□□□ -0.16
CBX3-202ENST00000396386 UBXN2BQ14CS0 331 aa14.02□□□□□ -0.16
CBX3-202ENST00000396386 PTGES3Q15185 160 aaKnown RBP14.02□□□□□ -0.16
CBX3-202ENST00000396386 CCDC85BQ15834 202 aaPredicted RBP14.02□□□□□ -0.16
CBX3-202ENST00000396386 ZNF311Q5JNZ3 666 aa14.02□□□□□ -0.16
CBX3-202ENST00000396386 C6orf132Q5T0Z8 1188 aa14.02□□□□□ -0.16
CBX3-202ENST00000396386 PRSS41Q7RTY9 318 aa14.02□□□□□ -0.16
CBX3-202ENST00000396386 OR4N5Q8IXE1 308 aa14.02□□□□□ -0.16
CBX3-202ENST00000396386 OR2L13Q8N349 312 aa14.02□□□□□ -0.16
CBX3-202ENST00000396386 DNAJC22Q8N4W6 341 aa14.02□□□□□ -0.16
CBX3-202ENST00000396386 LINC00471Q8N535 108 aa14.02□□□□□ -0.16
CBX3-202ENST00000396386 NR4A3Q92570 626 aa14.02□□□□□ -0.16
CBX3-202ENST00000396386 MYDGFQ969H8 173 aa14.02□□□□□ -0.16
CBX3-202ENST00000396386 COPS4Q9BT78 406 aa14.02□□□□□ -0.16
CBX3-202ENST00000396386 ACOT13Q9NPJ3 140 aa14.02□□□□□ -0.16
CBX3-202ENST00000396386 TMEM74BQ9NUR3 256 aa14.02□□□□□ -0.16
CBX3-202ENST00000396386 PSORS1C1Q9UIG5 152 aa14.02□□□□□ -0.16
CBX3-202ENST00000396386 GOLGA4Q13439 2230 aaKnown RBP14.02□□□□□ -0.17
CBX3-202ENST00000396386 TMX2-CTNND1H3BSU7 103 aa14.01□□□□□ -0.17
CBX3-202ENST00000396386 MPZL2O60487 215 aa14.01□□□□□ -0.17
CBX3-202ENST00000396386 GALR3O60755 368 aaPredicted RBP14.01□□□□□ -0.17
CBX3-202ENST00000396386 DNAJB6O75190 326 aa14.01□□□□□ -0.17
CBX3-202ENST00000396386 SLITRK5O94991 958 aa14.01□□□□□ -0.17
CBX3-202ENST00000396386 ST6GAL1P15907 406 aa14.01□□□□□ -0.17
CBX3-202ENST00000396386 SHC2P98077 582 aa14.01□□□□□ -0.17
CBX3-202ENST00000396386 CHRNEQ04844 493 aa14.01□□□□□ -0.17
CBX3-202ENST00000396386 PIN1Q13526 163 aaPredicted RBP14.01□□□□□ -0.17
CBX3-202ENST00000396386 ELOCQ15369 112 aa14.01□□□□□ -0.17
CBX3-202ENST00000396386 SYT6Q5T7P8 510 aaPredicted RBP14.01□□□□□ -0.17
CBX3-202ENST00000396386 HEPHL1Q6MZM0 1159 aa14.01□□□□□ -0.17
CBX3-202ENST00000396386 PGBD2Q6P3X8 592 aa14.01□□□□□ -0.17
CBX3-202ENST00000396386 SLC16A12Q6ZSM3 486 aa14.01□□□□□ -0.17
CBX3-202ENST00000396386 ANKRD13BQ86YJ7 626 aa14.01□□□□□ -0.17
CBX3-202ENST00000396386 C19orf47Q8N9M1 422 aaKnown RBP14.01□□□□□ -0.17
CBX3-202ENST00000396386 OR6T1Q8NGN1 323 aa14.01□□□□□ -0.17
CBX3-202ENST00000396386 FCGR1BQ92637 280 aa14.01□□□□□ -0.17
CBX3-202ENST00000396386 FKBP10Q96AY3 582 aa14.01□□□□□ -0.17
CBX3-202ENST00000396386 ARHGDIGQ99819 225 aa14.01□□□□□ -0.17
CBX3-202ENST00000396386 BCL7BQ9BQE9 202 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms