RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 C16orf78Q8WTQ4 265 aa16.76■□□□□ 0.27
FXN-203ENST00000396366 EXOSC8Q96B26 276 aaKnown RBP16.76■□□□□ 0.27
FXN-203ENST00000396366 ZNF597Q96LX8 424 aa16.76■□□□□ 0.27
FXN-203ENST00000396366 NODALQ96S42 347 aa16.76■□□□□ 0.27
FXN-203ENST00000396366 INTS1Q8N201 2190 aaKnown RBP16.76■□□□□ 0.27
FXN-203ENST00000396366 SMIM23A6NLE4 172 aa16.75■□□□□ 0.27
FXN-203ENST00000396366 GNB5O14775 395 aa16.75■□□□□ 0.27
FXN-203ENST00000396366 WDR1O75083 606 aa16.75■□□□□ 0.27
FXN-203ENST00000396366 PPM1BO75688 479 aa16.75■□□□□ 0.27
FXN-203ENST00000396366 PROCP04070 461 aa16.75■□□□□ 0.27
FXN-203ENST00000396366 IGFBP2P18065 325 aa16.75■□□□□ 0.27
FXN-203ENST00000396366 PKNOX1P55347 436 aa16.75■□□□□ 0.27
FXN-203ENST00000396366 WNT3P56703 355 aa16.75■□□□□ 0.27
FXN-203ENST00000396366 ZNF628Q5EBL2 1059 aa16.75■□□□□ 0.27
FXN-203ENST00000396366 TBCELQ5QJ74 424 aa16.75■□□□□ 0.27
FXN-203ENST00000396366 ZYG11AQ6WRX3 759 aa16.75■□□□□ 0.27
FXN-203ENST00000396366 SEM1Q6ZVN7 128 aa16.75■□□□□ 0.27
FXN-203ENST00000396366 LIX1Q8N485 282 aa16.75■□□□□ 0.27
FXN-203ENST00000396366 GBP7Q8N8V2 638 aaPredicted RBP16.75■□□□□ 0.27
FXN-203ENST00000396366 UBLCP1Q8WVY7 318 aaPredicted RBP16.75■□□□□ 0.27
FXN-203ENST00000396366 KAT2AQ92830 837 aa16.75■□□□□ 0.27
FXN-203ENST00000396366 HGDQ93099 445 aa16.75■□□□□ 0.27
FXN-203ENST00000396366 NTNG2Q96CW9 530 aa16.75■□□□□ 0.27
FXN-203ENST00000396366 LCORQ96JN0 433 aaPredicted RBP16.75■□□□□ 0.27
FXN-203ENST00000396366 TNFRSF12AQ9NP84 129 aa16.75■□□□□ 0.27
FXN-203ENST00000396366 PFDN4Q9NQP4 134 aa16.75■□□□□ 0.27
FXN-203ENST00000396366 QPCTLQ9NXS2 382 aa16.75■□□□□ 0.27
FXN-203ENST00000396366 B4GALT7Q9UBV7 327 aa16.75■□□□□ 0.27
FXN-203ENST00000396366 SLC6A5Q9Y345 797 aa16.75■□□□□ 0.27
FXN-203ENST00000396366 ARHGAP21Q5T5U3 1957 aa16.75■□□□□ 0.27
FXN-203ENST00000396366 C15orf38-AP3S2A0A0A6YYH1 394 aa16.74■□□□□ 0.27
FXN-203ENST00000396366 SNX4O95219 450 aa16.74■□□□□ 0.27
FXN-203ENST00000396366 ENO1P06733 434 aaKnown RBP16.74■□□□□ 0.27
FXN-203ENST00000396366 MYL2P10916 166 aa16.74■□□□□ 0.27
FXN-203ENST00000396366 KRT15P19012 456 aa16.74■□□□□ 0.27
FXN-203ENST00000396366 MSX1P28360 303 aa16.74■□□□□ 0.27
FXN-203ENST00000396366 SSTR2P30874 369 aa16.74■□□□□ 0.27
FXN-203ENST00000396366 TIA1P31483 386 aaKnown RBP eCLIP16.74■□□□□ 0.272e-15■■■■□ 23.3
FXN-203ENST00000396366 PTGDSP41222 190 aa16.74■□□□□ 0.27
FXN-203ENST00000396366 MASP1P48740 699 aa16.74■□□□□ 0.27
FXN-203ENST00000396366 TMED10P49755 219 aaKnown RBP16.74■□□□□ 0.27
FXN-203ENST00000396366 TLE4Q04727 773 aa16.74■□□□□ 0.27
FXN-203ENST00000396366 ACSM2AQ08AH3 577 aa16.74■□□□□ 0.27
FXN-203ENST00000396366 EIPR1Q53HC9 387 aa16.74■□□□□ 0.27
FXN-203ENST00000396366 ACSM2BQ68CK6 577 aa16.74■□□□□ 0.27
FXN-203ENST00000396366 PACS2Q86VP3 889 aa16.74■□□□□ 0.27
FXN-203ENST00000396366 ULK2Q8IYT8 1036 aa16.74■□□□□ 0.27
FXN-203ENST00000396366 OR9A2Q8NGT5 310 aa16.74■□□□□ 0.27
FXN-203ENST00000396366 OMA1Q96E52 524 aa16.74■□□□□ 0.27
FXN-203ENST00000396366 C11orf24Q96F05 449 aaPredicted RBP16.74■□□□□ 0.27
FXN-203ENST00000396366 SECISBP2Q96T21 854 aaKnown RBP16.74■□□□□ 0.27
FXN-203ENST00000396366 TIMP4Q99727 224 aa16.74■□□□□ 0.27
FXN-203ENST00000396366 SHCBP1LQ9BZQ2 653 aa16.74■□□□□ 0.27
FXN-203ENST00000396366 UBQLN3Q9H347 655 aa16.74■□□□□ 0.27
FXN-203ENST00000396366 GALNT9Q9HCQ5 603 aa16.74■□□□□ 0.27
FXN-203ENST00000396366 RYDENQ9NUL5 291 aaKnown RBP16.74■□□□□ 0.27
FXN-203ENST00000396366 C15orf41Q9Y2V0 281 aa16.74■□□□□ 0.27
FXN-203ENST00000396366 UGT2B11O75310 529 aa16.73■□□□□ 0.27
FXN-203ENST00000396366 GLRA3O75311 464 aa16.73■□□□□ 0.27
FXN-203ENST00000396366 HPNP05981 417 aa16.73■□□□□ 0.27
FXN-203ENST00000396366 DRD2P14416 443 aa16.73■□□□□ 0.27
FXN-203ENST00000396366 DRD5P21918 477 aa16.73■□□□□ 0.27
FXN-203ENST00000396366 ZFP36L2P47974 494 aaKnown RBP16.73■□□□□ 0.27
FXN-203ENST00000396366 CDK9P50750 372 aaKnown RBP16.73■□□□□ 0.27
FXN-203ENST00000396366 NAGLUP54802 743 aa16.73■□□□□ 0.27
FXN-203ENST00000396366 CRYZQ08257 329 aaKnown RBP16.73■□□□□ 0.27
FXN-203ENST00000396366 PLCXD2Q0VAA5 305 aa16.73■□□□□ 0.27
FXN-203ENST00000396366 TOMM20Q15388 145 aa16.73■□□□□ 0.27
FXN-203ENST00000396366 SPIN4Q56A73 249 aa16.73■□□□□ 0.27
FXN-203ENST00000396366 SPDYAQ5MJ70 313 aa16.73■□□□□ 0.27
FXN-203ENST00000396366 EPS8L3Q8TE67 593 aaKnown RBP16.73■□□□□ 0.27
FXN-203ENST00000396366 TRIM44Q96DX7 344 aaPredicted RBP16.73■□□□□ 0.27
FXN-203ENST00000396366 HSPBAP1Q96EW2 488 aa16.73■□□□□ 0.27
FXN-203ENST00000396366 C14orf79Q96F83 325 aa16.73■□□□□ 0.27
FXN-203ENST00000396366 TMEM41AQ96HV5 264 aa16.73■□□□□ 0.27
FXN-203ENST00000396366 METTL7AQ9H8H3 244 aa16.73■□□□□ 0.27
FXN-203ENST00000396366 CFL2Q9Y281 166 aa16.73■□□□□ 0.27
FXN-203ENST00000396366 STK38LQ9Y2H1 464 aa16.73■□□□□ 0.27
FXN-203ENST00000396366 GPR55Q9Y2T6 319 aaPredicted RBP16.73■□□□□ 0.27
FXN-203ENST00000396366 TEP1Q99973 2627 aaKnown RBP16.73■□□□□ 0.27
FXN-203ENST00000396366 MED12Q93074 2177 aa16.72■□□□□ 0.27
FXN-203ENST00000396366 KIAA1549Q9HCM3 1950 aa16.72■□□□□ 0.27
FXN-203ENST00000396366 SERTM1A2A2V5 107 aa16.72■□□□□ 0.27
FXN-203ENST00000396366 PLIN3O60664 434 aa16.72■□□□□ 0.27
FXN-203ENST00000396366 ICOSLGO75144 302 aa16.72■□□□□ 0.27
FXN-203ENST00000396366 ANXA4P09525 319 aaPredicted RBP16.72■□□□□ 0.27
FXN-203ENST00000396366 NAGAP17050 411 aa16.72■□□□□ 0.27
FXN-203ENST00000396366 PTPN6P29350 595 aa16.72■□□□□ 0.27
FXN-203ENST00000396366 PPICP45877 212 aa16.72■□□□□ 0.27
FXN-203ENST00000396366 CORO7P57737 925 aa16.72■□□□□ 0.27
FXN-203ENST00000396366 WIPI1Q5MNZ9 446 aaPredicted RBP16.72■□□□□ 0.27
FXN-203ENST00000396366 DCST1Q5T197 706 aa16.72■□□□□ 0.27
FXN-203ENST00000396366 TIGD3Q6B0B8 471 aa16.72■□□□□ 0.27
FXN-203ENST00000396366 GALNT18Q6P9A2 607 aa16.72■□□□□ 0.27
FXN-203ENST00000396366 ANGPTL8Q6UXH0 198 aa16.72■□□□□ 0.27
FXN-203ENST00000396366 NUP54Q7Z3B4 507 aa16.72■□□□□ 0.27
FXN-203ENST00000396366 CDC26Q8NHZ8 85 aa16.72■□□□□ 0.27
FXN-203ENST00000396366 TMBIM1Q969X1 311 aa16.72■□□□□ 0.27
FXN-203ENST00000396366 SLC35C2Q9NQQ7 365 aa16.72■□□□□ 0.27
FXN-203ENST00000396366 PRODH2Q9UF12 536 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms