RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 NLGN3Q9NZ94 848 aa14□□□□□ -0.17
CCT4-201ENST00000394440 KLHL3Q9UH77 587 aa14□□□□□ -0.17
CCT4-201ENST00000394440 ORC6Q9Y5N6 252 aa14□□□□□ -0.17
CCT4-201ENST00000394440 LOC100130705A0A1B0GUX0 176 aa13.99□□□□□ -0.17
CCT4-201ENST00000394440 EME2A4GXA9 379 aaPredicted RBP13.99□□□□□ -0.17
CCT4-201ENST00000394440 TRIM64CA6NLI5 447 aa13.99□□□□□ -0.17
CCT4-201ENST00000394440 DUXAA6NLW8 204 aa13.99□□□□□ -0.17
CCT4-201ENST00000394440 ZIC2O95409 532 aaPredicted RBP13.99□□□□□ -0.17
CCT4-201ENST00000394440 CLPTM1O96005 669 aa13.99□□□□□ -0.17
CCT4-201ENST00000394440 RNH1P13489 461 aaKnown RBP13.99□□□□□ -0.17
CCT4-201ENST00000394440 PPM1FP49593 454 aaPredicted RBP13.99□□□□□ -0.17
CCT4-201ENST00000394440 IGLV3-21P80748 117 aaPredicted RBP13.99□□□□□ -0.17
CCT4-201ENST00000394440 FAM214AQ32MH5 1076 aa13.99□□□□□ -0.17
CCT4-201ENST00000394440 RNF220Q5VTB9 566 aa13.99□□□□□ -0.17
CCT4-201ENST00000394440 TCTN3Q6NUS6 607 aa13.99□□□□□ -0.17
CCT4-201ENST00000394440 TSPAN14Q8NG11 270 aa13.99□□□□□ -0.17
CCT4-201ENST00000394440 OR6C4Q8NGE1 309 aa13.99□□□□□ -0.17
CCT4-201ENST00000394440 ADAMTS18Q8TE60 1221 aa13.99□□□□□ -0.17
CCT4-201ENST00000394440 DHRS1Q96LJ7 313 aa13.99□□□□□ -0.17
CCT4-201ENST00000394440 SPATA5L1Q9BVQ7 753 aa13.99□□□□□ -0.17
CCT4-201ENST00000394440 GRIP2Q9C0E4 1043 aa13.99□□□□□ -0.17
CCT4-201ENST00000394440 ACAD8Q9UKU7 415 aa13.99□□□□□ -0.17
CCT4-201ENST00000394440 CLCA2Q9UQC9 943 aa13.99□□□□□ -0.17
CCT4-201ENST00000394440 CLDN16Q9Y5I7 305 aa13.99□□□□□ -0.17
CCT4-201ENST00000394440 A8MVJ9 347 aa13.99□□□□□ -0.17
CCT4-201ENST00000394440 HRO43593 1189 aa13.99□□□□□ -0.17
CCT4-201ENST00000394440 SEC24DO94855 1032 aaPredicted RBP13.99□□□□□ -0.17
CCT4-201ENST00000394440 CT62P0C5K7 136 aa13.99□□□□□ -0.17
CCT4-201ENST00000394440 SLC35E2P0CK97 266 aa13.99□□□□□ -0.17
CCT4-201ENST00000394440 ACP2P11117 423 aa13.99□□□□□ -0.17
CCT4-201ENST00000394440 MYF5P13349 255 aa13.99□□□□□ -0.17
CCT4-201ENST00000394440 CD1CP29017 333 aa13.99□□□□□ -0.17
CCT4-201ENST00000394440 EXOC3L2Q2M3D2 409 aa13.99□□□□□ -0.17
CCT4-201ENST00000394440 GPAT3Q53EU6 434 aa13.99□□□□□ -0.17
CCT4-201ENST00000394440 ZNF691Q5VV52 312 aa13.99□□□□□ -0.17
CCT4-201ENST00000394440 WDR53Q7Z5U6 358 aaPredicted RBP13.99□□□□□ -0.17
CCT4-201ENST00000394440 THAP5Q7Z6K1 395 aa13.99□□□□□ -0.17
CCT4-201ENST00000394440 GALNT5Q7Z7M9 940 aa13.99□□□□□ -0.17
CCT4-201ENST00000394440 PLXDC1Q8IUK5 500 aa13.99□□□□□ -0.17
CCT4-201ENST00000394440 C8orf59Q8N0T1 100 aaPredicted RBP13.99□□□□□ -0.17
CCT4-201ENST00000394440 ADAMTS15Q8TE58 950 aa13.99□□□□□ -0.17
CCT4-201ENST00000394440 GIPC3Q8TF64 312 aa13.99□□□□□ -0.17
CCT4-201ENST00000394440 SPRTNQ9H040 489 aaPredicted RBP13.99□□□□□ -0.17
CCT4-201ENST00000394440 CALML5Q9NZT1 146 aa13.99□□□□□ -0.17
CCT4-201ENST00000394440 TMEM9Q9P0T7 183 aa13.99□□□□□ -0.17
CCT4-201ENST00000394440 HCN3Q9P1Z3 774 aa13.99□□□□□ -0.17
CCT4-201ENST00000394440 PCDHGA8Q9Y5G5 932 aa13.99□□□□□ -0.17
CCT4-201ENST00000394440 ZDBF2Q9HCK1 2354 aa13.98□□□□□ -0.17
CCT4-201ENST00000394440 BLACEA4D250 179 aa13.98□□□□□ -0.17
CCT4-201ENST00000394440 TGFBR3LH3BV60 316 aa13.98□□□□□ -0.17
CCT4-201ENST00000394440 AGR2O95994 175 aa13.98□□□□□ -0.17
CCT4-201ENST00000394440 PLA2G5P39877 138 aa13.98□□□□□ -0.17
CCT4-201ENST00000394440 MAP3K8P41279 467 aa13.98□□□□□ -0.17
CCT4-201ENST00000394440 GCGRP47871 477 aa13.98□□□□□ -0.17
CCT4-201ENST00000394440 CSTF1Q05048 431 aaKnown RBP13.98□□□□□ -0.17
CCT4-201ENST00000394440 IL18R1Q13478 541 aa13.98□□□□□ -0.17
CCT4-201ENST00000394440 MICAQ29983 383 aa13.98□□□□□ -0.17
CCT4-201ENST00000394440 LIN52Q52LA3 116 aa13.98□□□□□ -0.17
CCT4-201ENST00000394440 LACC1Q8IV20 430 aa13.98□□□□□ -0.17
CCT4-201ENST00000394440 C1orf210Q8IVY1 113 aa13.98□□□□□ -0.17
CCT4-201ENST00000394440 ATG16L2Q8NAA4 619 aa13.98□□□□□ -0.17
CCT4-201ENST00000394440 OR10G2Q8NGC3 310 aa13.98□□□□□ -0.17
CCT4-201ENST00000394440 SAP25Q8TEE9 199 aa13.98□□□□□ -0.17
CCT4-201ENST00000394440 FAM122AQ96E09 287 aa13.98□□□□□ -0.17
CCT4-201ENST00000394440 YTHDF1Q9BYJ9 559 aaKnown RBP13.98□□□□□ -0.17
CCT4-201ENST00000394440 KRT84Q9NSB2 600 aa13.98□□□□□ -0.17
CCT4-201ENST00000394440 FAM32AQ9Y421 112 aaKnown RBP13.98□□□□□ -0.17
CCT4-201ENST00000394440 TMEM184BQ9Y519 407 aaPredicted RBP13.98□□□□□ -0.17
CCT4-201ENST00000394440 FER1L5A0AVI2 2057 aa13.98□□□□□ -0.17
CCT4-201ENST00000394440 CASC3O15234 703 aaKnown RBP13.98□□□□□ -0.17
CCT4-201ENST00000394440 NT5EP21589 574 aa13.98□□□□□ -0.17
CCT4-201ENST00000394440 RPL5P46777 297 aaKnown RBP13.98□□□□□ -0.17
CCT4-201ENST00000394440 ISL1P61371 349 aa13.98□□□□□ -0.17
CCT4-201ENST00000394440 HSD11B2P80365 405 aa13.98□□□□□ -0.17
CCT4-201ENST00000394440 MAT1AQ00266 395 aaKnown RBP13.98□□□□□ -0.17
CCT4-201ENST00000394440 CHRNEQ04844 493 aa13.98□□□□□ -0.17
CCT4-201ENST00000394440 KCNAB1Q14722 419 aa13.98□□□□□ -0.17
CCT4-201ENST00000394440 GRM7Q14831 915 aa13.98□□□□□ -0.17
CCT4-201ENST00000394440 DUSP5Q16690 384 aa13.98□□□□□ -0.17
CCT4-201ENST00000394440 ATAD3BQ5T9A4 648 aa13.98□□□□□ -0.17
CCT4-201ENST00000394440 DGAT2L6Q6ZPD8 337 aa13.98□□□□□ -0.17
CCT4-201ENST00000394440 PRSS42Q7Z5A4 293 aa13.98□□□□□ -0.17
CCT4-201ENST00000394440 RBM45Q8IUH3 476 aaKnown RBP13.98□□□□□ -0.17
CCT4-201ENST00000394440 ZNF595Q8IYB9 648 aa13.98□□□□□ -0.17
CCT4-201ENST00000394440 D2HGDHQ8N465 521 aa13.98□□□□□ -0.17
CCT4-201ENST00000394440 HOXB13Q92826 284 aaPredicted RBP13.98□□□□□ -0.17
CCT4-201ENST00000394440 CDS1Q92903 461 aa13.98□□□□□ -0.17
CCT4-201ENST00000394440 PEX11GQ96HA9 241 aa13.98□□□□□ -0.17
CCT4-201ENST00000394440 SLC41A2Q96JW4 573 aa13.98□□□□□ -0.17
CCT4-201ENST00000394440 RBCK1Q9BYM8 510 aa13.98□□□□□ -0.17
CCT4-201ENST00000394440 KIF17Q9P2E2 1029 aa13.98□□□□□ -0.17
CCT4-201ENST00000394440 NUP210LQ5VU65 1888 aa13.98□□□□□ -0.17
CCT4-201ENST00000394440 LY6G6EA0A0G2JKS1 128 aa13.97□□□□□ -0.17
CCT4-201ENST00000394440 ARRDC5A6NEK1 342 aa13.97□□□□□ -0.17
CCT4-201ENST00000394440 H0YIG0 161 aa13.97□□□□□ -0.17
CCT4-201ENST00000394440 PCDHGA12O60330 932 aa13.97□□□□□ -0.17
CCT4-201ENST00000394440 GADD45GO95257 159 aa13.97□□□□□ -0.17
CCT4-201ENST00000394440 LGI1O95970 557 aa13.97□□□□□ -0.17
CCT4-201ENST00000394440 PABPC4LP0CB38 370 aaKnown RBP13.97□□□□□ -0.17
CCT4-201ENST00000394440 ATP6V1B1P15313 513 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms