RNA–Protein interactions for RNA: ENST00000394084.5

GAPVD1-205, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-205ENST00000394084 LINC01555Q8NAE3 123 aa13.14□□□□□ -0.31
GAPVD1-205ENST00000394084 RSPRY1Q96DX4 576 aa13.14□□□□□ -0.31
GAPVD1-205ENST00000394084 DEPDC7Q96QD5 511 aa13.14□□□□□ -0.31
GAPVD1-205ENST00000394084 FYTTD1Q96QD9 318 aaKnown RBP13.14□□□□□ -0.31
GAPVD1-205ENST00000394084 AICDAQ9GZX7 198 aa13.14□□□□□ -0.31
GAPVD1-205ENST00000394084 SLC22A4Q9H015 551 aa13.14□□□□□ -0.31
GAPVD1-205ENST00000394084 SAP130Q9H0E3 1048 aa13.14□□□□□ -0.31
GAPVD1-205ENST00000394084 SNX7Q9UNH6 387 aa13.14□□□□□ -0.31
GAPVD1-205ENST00000394084 KIF26AQ9ULI4 1882 aaPredicted RBP13.13□□□□□ -0.31
GAPVD1-205ENST00000394084 CPSF4LA6NMK7 179 aaKnown RBP13.13□□□□□ -0.31
GAPVD1-205ENST00000394084 RGS13O14921 159 aa13.13□□□□□ -0.31
GAPVD1-205ENST00000394084 TBX19O60806 448 aa13.13□□□□□ -0.31
GAPVD1-205ENST00000394084 HMGN2P05204 90 aaKnown RBP13.13□□□□□ -0.31
GAPVD1-205ENST00000394084 CCL5P13501 91 aa13.13□□□□□ -0.31
GAPVD1-205ENST00000394084 GJA8P48165 433 aa13.13□□□□□ -0.31
GAPVD1-205ENST00000394084 SLC9A3P48764 834 aa13.13□□□□□ -0.31
GAPVD1-205ENST00000394084 SMSP52788 366 aa13.13□□□□□ -0.31
GAPVD1-205ENST00000394084 DUSP2Q05923 314 aa13.13□□□□□ -0.31
GAPVD1-205ENST00000394084 HNRNPA1L2Q32P51 320 aaKnown RBP13.13□□□□□ -0.31
GAPVD1-205ENST00000394084 DDI2Q5TDH0 399 aa13.13□□□□□ -0.31
GAPVD1-205ENST00000394084 ZNF765Q7L2R6 523 aa13.13□□□□□ -0.31
GAPVD1-205ENST00000394084 PRICKLE2Q7Z3G6 844 aa13.13□□□□□ -0.31
GAPVD1-205ENST00000394084 GALNT12Q8IXK2 581 aa13.13□□□□□ -0.31
GAPVD1-205ENST00000394084 OR8D4Q8NGM9 314 aa13.13□□□□□ -0.31
GAPVD1-205ENST00000394084 TEX47Q8TBZ9 253 aa13.13□□□□□ -0.31
GAPVD1-205ENST00000394084 KATNB1Q9BVA0 655 aa13.13□□□□□ -0.31
GAPVD1-205ENST00000394084 RANGRFQ9HD47 186 aaPredicted RBP13.13□□□□□ -0.31
GAPVD1-205ENST00000394084 WASH6PQ9NQA3 447 aa13.13□□□□□ -0.31
GAPVD1-205ENST00000394084 SLC35C2Q9NQQ7 365 aa13.13□□□□□ -0.31
GAPVD1-205ENST00000394084 ZSCAN32Q9NX65 697 aa13.13□□□□□ -0.31
GAPVD1-205ENST00000394084 IRAK3Q9Y616 596 aa13.13□□□□□ -0.31
GAPVD1-205ENST00000394084 A0A087WUU8 490 aa13.13□□□□□ -0.31
GAPVD1-205ENST00000394084 SLC35F4A4IF30 521 aa13.13□□□□□ -0.31
GAPVD1-205ENST00000394084 PGRMC2O15173 223 aa13.13□□□□□ -0.31
GAPVD1-205ENST00000394084 HOXC11O43248 304 aaPredicted RBP13.13□□□□□ -0.31
GAPVD1-205ENST00000394084 NCR1O76036 304 aa13.13□□□□□ -0.31
GAPVD1-205ENST00000394084 APEX1P27695 318 aaKnown RBP13.13□□□□□ -0.31
GAPVD1-205ENST00000394084 GAS1P54826 345 aa13.13□□□□□ -0.31
GAPVD1-205ENST00000394084 TAS2R41P59536 307 aa13.13□□□□□ -0.31
GAPVD1-205ENST00000394084 CSNK1G2P78368 415 aa13.13□□□□□ -0.31
GAPVD1-205ENST00000394084 CDK5Q00535 292 aa13.13□□□□□ -0.31
GAPVD1-205ENST00000394084 FABP5Q01469 135 aa13.13□□□□□ -0.31
GAPVD1-205ENST00000394084 DPTQ07507 201 aa13.13□□□□□ -0.31
GAPVD1-205ENST00000394084 COX10Q12887 443 aa13.13□□□□□ -0.31
GAPVD1-205ENST00000394084 C1orf94Q6P1W5 598 aa13.13□□□□□ -0.31
GAPVD1-205ENST00000394084 TMEM107Q6UX40 140 aa13.13□□□□□ -0.31
GAPVD1-205ENST00000394084 LRRTM4Q86VH4 590 aa13.13□□□□□ -0.31
GAPVD1-205ENST00000394084 GLCCI1Q86VQ1 547 aa13.13□□□□□ -0.31
GAPVD1-205ENST00000394084 NATD1Q8N6N6 113 aa13.13□□□□□ -0.31
GAPVD1-205ENST00000394084 ATP6V1C2Q8NEY4 427 aa13.13□□□□□ -0.31
GAPVD1-205ENST00000394084 OR8K5Q8NH50 307 aa13.13□□□□□ -0.31
GAPVD1-205ENST00000394084 ZG16BQ96DA0 208 aa13.13□□□□□ -0.31
GAPVD1-205ENST00000394084 FAM46AQ96IP4 442 aaKnown RBP13.13□□□□□ -0.31
GAPVD1-205ENST00000394084 PRRC1Q96M27 445 aa13.13□□□□□ -0.31
GAPVD1-205ENST00000394084 TOX2Q96NM4 488 aa13.13□□□□□ -0.31
GAPVD1-205ENST00000394084 FERD3LQ96RJ6 166 aa13.13□□□□□ -0.31
GAPVD1-205ENST00000394084 ACSS1Q9NUB1 689 aaPredicted RBP13.13□□□□□ -0.31
GAPVD1-205ENST00000394084 PAQR5Q9NXK6 330 aaPredicted RBP13.13□□□□□ -0.31
GAPVD1-205ENST00000394084 IL20RAQ9UHF4 553 aa13.13□□□□□ -0.31
GAPVD1-205ENST00000394084 DNMT3AQ9Y6K1 912 aaPredicted RBP13.13□□□□□ -0.31
GAPVD1-205ENST00000394084 OTOL1A6NHN0 477 aaPredicted RBP13.12□□□□□ -0.31
GAPVD1-205ENST00000394084 TTC36A6NLP5 189 aa13.12□□□□□ -0.31
GAPVD1-205ENST00000394084 FAM170BA6NMN3 283 aa13.12□□□□□ -0.31
GAPVD1-205ENST00000394084 SCAMP1O15126 338 aa13.12□□□□□ -0.31
GAPVD1-205ENST00000394084 FGBP02675 491 aa13.12□□□□□ -0.31
GAPVD1-205ENST00000394084 LINC00271P0C7V0 271 aa13.12□□□□□ -0.31
GAPVD1-205ENST00000394084 DDOSTP39656 456 aa13.12□□□□□ -0.31
GAPVD1-205ENST00000394084 CD83Q01151 205 aa13.12□□□□□ -0.31
GAPVD1-205ENST00000394084 KLHL22Q53GT1 634 aa13.12□□□□□ -0.31
GAPVD1-205ENST00000394084 XKRXQ6PP77 449 aa13.12□□□□□ -0.31
GAPVD1-205ENST00000394084 OTUB2Q96DC9 234 aa13.12□□□□□ -0.31
GAPVD1-205ENST00000394084 MSLNLQ96KJ4 702 aa13.12□□□□□ -0.31
GAPVD1-205ENST00000394084 DCLRE1CQ96SD1 692 aaKnown RBP13.12□□□□□ -0.31
GAPVD1-205ENST00000394084 PRRG3Q9BZD7 231 aa13.12□□□□□ -0.31
GAPVD1-205ENST00000394084 TBC1D17Q9HA65 648 aa13.12□□□□□ -0.31
GAPVD1-205ENST00000394084 NTNG1Q9Y2I2 539 aa13.12□□□□□ -0.31
GAPVD1-205ENST00000394084 GPR55Q9Y2T6 319 aaPredicted RBP13.12□□□□□ -0.31
GAPVD1-205ENST00000394084 C4orf51C9J302 202 aa13.12□□□□□ -0.31
GAPVD1-205ENST00000394084 SLC9A3R1O14745 358 aaPredicted RBP13.12□□□□□ -0.31
GAPVD1-205ENST00000394084 SLC30A4O14863 429 aa13.12□□□□□ -0.31
GAPVD1-205ENST00000394084 CASKO14936 926 aa13.12□□□□□ -0.31
GAPVD1-205ENST00000394084 LGI1O95970 557 aa13.12□□□□□ -0.31
GAPVD1-205ENST00000394084 LALBAP00709 142 aa13.12□□□□□ -0.31
GAPVD1-205ENST00000394084 CLTBP09497 229 aa13.12□□□□□ -0.31
GAPVD1-205ENST00000394084 SLC35G4P0C7Q5 338 aa13.12□□□□□ -0.31
GAPVD1-205ENST00000394084 ACP2P11117 423 aa13.12□□□□□ -0.31
GAPVD1-205ENST00000394084 NTSP30990 170 aa13.12□□□□□ -0.31
GAPVD1-205ENST00000394084 MTNR1AP48039 350 aa13.12□□□□□ -0.31
GAPVD1-205ENST00000394084 KHKP50053 298 aa13.12□□□□□ -0.31
GAPVD1-205ENST00000394084 INSL4Q14641 139 aa13.12□□□□□ -0.31
GAPVD1-205ENST00000394084 PLK5Q496M5 336 aa13.12□□□□□ -0.31
GAPVD1-205ENST00000394084 RNLSQ5VYX0 342 aa13.12□□□□□ -0.31
GAPVD1-205ENST00000394084 SLC36A4Q6YBV0 504 aa13.12□□□□□ -0.31
GAPVD1-205ENST00000394084 ERN2Q76MJ5 926 aaKnown RBP13.12□□□□□ -0.31
GAPVD1-205ENST00000394084 VRK2Q86Y07 508 aa13.12□□□□□ -0.31
GAPVD1-205ENST00000394084 CLDN22Q8N7P3 220 aa13.12□□□□□ -0.31
GAPVD1-205ENST00000394084 MRPL43Q8N983 215 aaKnown RBP13.12□□□□□ -0.31
GAPVD1-205ENST00000394084 OR4F15Q8NGB8 312 aa13.12□□□□□ -0.31
GAPVD1-205ENST00000394084 TMEM163Q8TC26 289 aa13.12□□□□□ -0.31
GAPVD1-205ENST00000394084 UFD1Q92890 307 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms