RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 SPATA9Q9BWV2 254 aa22.61■■□□□ 1.21
LRFN4-202ENST00000393952 ACTRT3Q9BYD9 372 aa22.61■■□□□ 1.21
LRFN4-202ENST00000393952 FARSAQ9Y285 508 aaKnown RBP22.61■■□□□ 1.21
LRFN4-202ENST00000393952 HMGN4O00479 90 aa22.6■■□□□ 1.21
LRFN4-202ENST00000393952 ACOT8O14734 319 aa22.6■■□□□ 1.21
LRFN4-202ENST00000393952 OR12D1P0DN82 309 aa22.6■■□□□ 1.21
LRFN4-202ENST00000393952 NCK1P16333 377 aa22.6■■□□□ 1.21
LRFN4-202ENST00000393952 CD82P27701 267 aa22.6■■□□□ 1.21
LRFN4-202ENST00000393952 MAN2A2P49641 1150 aa22.6■■□□□ 1.21
LRFN4-202ENST00000393952 FOXC1Q12948 553 aa22.6■■□□□ 1.21
LRFN4-202ENST00000393952 FXNQ16595 210 aa22.6■■□□□ 1.21
LRFN4-202ENST00000393952 VMACQ2NL98 169 aa22.6■■□□□ 1.21
LRFN4-202ENST00000393952 CPEB2Q7Z5Q1 589 aaKnown RBP22.6■■□□□ 1.21
LRFN4-202ENST00000393952 PTRH1Q86Y79 214 aaKnown RBP22.6■■□□□ 1.21
LRFN4-202ENST00000393952 ZNF615Q8N8J6 731 aa22.6■■□□□ 1.21
LRFN4-202ENST00000393952 OR7D2Q96RA2 312 aa22.6■■□□□ 1.21
LRFN4-202ENST00000393952 OR10A5Q9H207 317 aa22.6■■□□□ 1.21
LRFN4-202ENST00000393952 C19orf25Q9UFG5 118 aaPredicted RBP22.6■■□□□ 1.21
LRFN4-202ENST00000393952 TCFL5Q9UL49 500 aa22.6■■□□□ 1.21
LRFN4-202ENST00000393952 IQCJ-SCHIP1C9J366 451 aaPredicted RBP22.59■■□□□ 1.21
LRFN4-202ENST00000393952 TERTO14746 1132 aaKnown RBP22.59■■□□□ 1.21
LRFN4-202ENST00000393952 ACP2P11117 423 aa22.59■■□□□ 1.21
LRFN4-202ENST00000393952 F8A1P23610 371 aa22.59■■□□□ 1.21
LRFN4-202ENST00000393952 DLSTP36957 453 aa22.59■■□□□ 1.21
LRFN4-202ENST00000393952 MAGEA8P43361 318 aa22.59■■□□□ 1.21
LRFN4-202ENST00000393952 PRIM2P49643 509 aa22.59■■□□□ 1.21
LRFN4-202ENST00000393952 EMDP50402 254 aa22.59■■□□□ 1.21
LRFN4-202ENST00000393952 RPS15P62841 145 aaKnown RBP22.59■■□□□ 1.21
LRFN4-202ENST00000393952 EEF1A2Q05639 463 aaKnown RBP22.59■■□□□ 1.21
LRFN4-202ENST00000393952 ZNF155Q12901 538 aaPredicted RBP22.59■■□□□ 1.21
LRFN4-202ENST00000393952 CDC73Q6P1J9 531 aa22.59■■□□□ 1.21
LRFN4-202ENST00000393952 OR7G1Q8NGA0 311 aa22.59■■□□□ 1.21
LRFN4-202ENST00000393952 ZNF721Q8TF20 911 aa22.59■■□□□ 1.21
LRFN4-202ENST00000393952 WDR77Q9BQA1 342 aaPredicted RBP22.59■■□□□ 1.21
LRFN4-202ENST00000393952 DENND2DQ9H6A0 471 aaPredicted RBP22.59■■□□□ 1.21
LRFN4-202ENST00000393952 HEMK1Q9Y5R4 338 aaPredicted RBP22.59■■□□□ 1.21
LRFN4-202ENST00000393952 PIEZO1Q92508 2521 aa22.59■■□□□ 1.21
LRFN4-202ENST00000393952 SPTBN2O15020 2390 aa22.59■■□□□ 1.21
LRFN4-202ENST00000393952 LOC101059948A0A1B0GTJ6 334 aa22.59■■□□□ 1.21
LRFN4-202ENST00000393952 ARPC2O15144 300 aa22.59■■□□□ 1.21
LRFN4-202ENST00000393952 GSTA4O15217 222 aa22.59■■□□□ 1.21
LRFN4-202ENST00000393952 PRAMEF2O60811 474 aa22.59■■□□□ 1.21
LRFN4-202ENST00000393952 BCAS2O75934 225 aaPredicted RBP22.59■■□□□ 1.21
LRFN4-202ENST00000393952 DXOO77932 396 aaKnown RBP22.59■■□□□ 1.21
LRFN4-202ENST00000393952 IGKV3-11P04433 115 aa22.59■■□□□ 1.21
LRFN4-202ENST00000393952 KPNB1Q14974 876 aaKnown RBP22.59■■□□□ 1.21
LRFN4-202ENST00000393952 RTP5Q14D33 572 aa22.59■■□□□ 1.21
LRFN4-202ENST00000393952 ERICH5Q6P6B1 374 aa22.59■■□□□ 1.21
LRFN4-202ENST00000393952 PAPD4Q6PIY7 484 aaKnown RBP22.59■■□□□ 1.21
LRFN4-202ENST00000393952 LGI4Q8N135 537 aa22.59■■□□□ 1.21
LRFN4-202ENST00000393952 AMER2Q8N7J2 671 aa22.59■■□□□ 1.21
LRFN4-202ENST00000393952 SLC16A11Q8NCK7 471 aa22.59■■□□□ 1.21
LRFN4-202ENST00000393952 C11orf65Q8NCR3 313 aa22.59■■□□□ 1.21
LRFN4-202ENST00000393952 NKD1Q969G9 470 aa22.59■■□□□ 1.21
LRFN4-202ENST00000393952 ART5Q96L15 291 aa22.59■■□□□ 1.21
LRFN4-202ENST00000393952 NUDT9Q9BW91 350 aa22.59■■□□□ 1.21
LRFN4-202ENST00000393952 FOLH1BQ9HBA9 442 aa22.59■■□□□ 1.21
LRFN4-202ENST00000393952 KLK13Q9UKR3 277 aa22.59■■□□□ 1.21
LRFN4-202ENST00000393952 DTX4Q9Y2E6 619 aa22.59■■□□□ 1.21
LRFN4-202ENST00000393952 SNX13Q9Y5W8 968 aa22.59■■□□□ 1.21
LRFN4-202ENST00000393952 AK5Q9Y6K8 562 aa22.59■■□□□ 1.21
LRFN4-202ENST00000393952 SAGE2PA6NJ88 616 aa22.58■■□□□ 1.2
LRFN4-202ENST00000393952 C21orf140B9A014 251 aa22.58■■□□□ 1.2
LRFN4-202ENST00000393952 SEC24DO94855 1032 aaPredicted RBP22.58■■□□□ 1.2
LRFN4-202ENST00000393952 ARAFP10398 606 aa22.58■■□□□ 1.2
LRFN4-202ENST00000393952 GGT1P19440 569 aa22.58■■□□□ 1.2
LRFN4-202ENST00000393952 ATP6V1B2P21281 511 aa22.58■■□□□ 1.2
LRFN4-202ENST00000393952 ANXA11P50995 505 aaKnown RBP22.58■■□□□ 1.2
LRFN4-202ENST00000393952 TRAP1Q12931 704 aaKnown RBP22.58■■□□□ 1.2
LRFN4-202ENST00000393952 FLOT2Q14254 428 aa22.58■■□□□ 1.2
LRFN4-202ENST00000393952 EXOSC6Q5RKV6 272 aaKnown RBP22.58■■□□□ 1.2
LRFN4-202ENST00000393952 CDRT4Q8N9R6 151 aa22.58■■□□□ 1.2
LRFN4-202ENST00000393952 MORN4Q8NDC4 146 aa22.58■■□□□ 1.2
LRFN4-202ENST00000393952 TNIP2Q8NFZ5 429 aa22.58■■□□□ 1.2
LRFN4-202ENST00000393952 C16orf52Q8NHV5 167 aa22.58■■□□□ 1.2
LRFN4-202ENST00000393952 ADAMTS15Q8TE58 950 aa22.58■■□□□ 1.2
LRFN4-202ENST00000393952 XAGE5Q8WWM1 108 aa22.58■■□□□ 1.2
LRFN4-202ENST00000393952 SLC9A6Q92581 669 aa22.58■■□□□ 1.2
LRFN4-202ENST00000393952 SLC35A4Q96G79 324 aa22.58■■□□□ 1.2
LRFN4-202ENST00000393952 TMEM38AQ9H6F2 299 aa22.58■■□□□ 1.2
LRFN4-202ENST00000393952 HS3ST3B1Q9Y662 390 aa22.58■■□□□ 1.2
LRFN4-202ENST00000393952 KCNE3Q9Y6H6 103 aa22.58■■□□□ 1.2
LRFN4-202ENST00000393952 LOC102723996A0A087X1L8 192 aa22.57■■□□□ 1.2
LRFN4-202ENST00000393952 ERFP50548 548 aa22.57■■□□□ 1.2
LRFN4-202ENST00000393952 SLC37A1P57057 533 aa22.57■■□□□ 1.2
LRFN4-202ENST00000393952 DUSP5Q16690 384 aa22.57■■□□□ 1.2
LRFN4-202ENST00000393952 ZCCHC12Q6PEW1 402 aa22.57■■□□□ 1.2
LRFN4-202ENST00000393952 CYP2R1Q6VVX0 501 aa22.57■■□□□ 1.2
LRFN4-202ENST00000393952 RNF111Q6ZNA4 994 aa22.57■■□□□ 1.2
LRFN4-202ENST00000393952 DHFR2Q86XF0 187 aa22.57■■□□□ 1.2
LRFN4-202ENST00000393952 DTX1Q86Y01 620 aa22.57■■□□□ 1.2
LRFN4-202ENST00000393952 HIPK4Q8NE63 616 aa22.57■■□□□ 1.2
LRFN4-202ENST00000393952 NFAM1Q8NET5 270 aaPredicted RBP22.57■■□□□ 1.2
LRFN4-202ENST00000393952 NFKBIDQ8NI38 313 aa22.57■■□□□ 1.2
LRFN4-202ENST00000393952 FIG4Q92562 907 aa22.57■■□□□ 1.2
LRFN4-202ENST00000393952 GPR87Q9BY21 358 aa22.57■■□□□ 1.2
LRFN4-202ENST00000393952 MUC13Q9H3R2 512 aa22.57■■□□□ 1.2
LRFN4-202ENST00000393952 A4GALTQ9NPC4 353 aa22.57■■□□□ 1.2
LRFN4-202ENST00000393952 THSD1Q9NS62 852 aa22.57■■□□□ 1.2
LRFN4-202ENST00000393952 PRAMEF27A3QJZ7 478 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms