RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 ANKRA2Q9H9E1 313 aa17.54■□□□□ 0.4
PDLIM7-204ENST00000393546 SLCO1B3Q9NPD5 702 aa17.54■□□□□ 0.4
PDLIM7-204ENST00000393546 C19orf53Q9UNZ5 99 aaPredicted RBP17.54■□□□□ 0.4
PDLIM7-204ENST00000393546 DTX4Q9Y2E6 619 aa17.54■□□□□ 0.4
PDLIM7-204ENST00000393546 NPFFR2Q9Y5X5 522 aa17.54■□□□□ 0.4
PDLIM7-204ENST00000393546 NBASA2RRP1 2371 aa17.53■□□□□ 0.4
PDLIM7-204ENST00000393546 A0A1W2PRB8 838 aa17.53■□□□□ 0.4
PDLIM7-204ENST00000393546 FBXO45P0C2W1 286 aa17.53■□□□□ 0.4
PDLIM7-204ENST00000393546 LAMP1P11279 417 aa17.53■□□□□ 0.4
PDLIM7-204ENST00000393546 DRD5P21918 477 aa17.53■□□□□ 0.4
PDLIM7-204ENST00000393546 MC3RP41968 323 aa17.53■□□□□ 0.4
PDLIM7-204ENST00000393546 C21orf58P58505 322 aa17.53■□□□□ 0.4
PDLIM7-204ENST00000393546 LYPD8Q6UX82 237 aa17.53■□□□□ 0.4
PDLIM7-204ENST00000393546 SULF2Q8IWU5 870 aa17.53■□□□□ 0.4
PDLIM7-204ENST00000393546 ARFGAP2Q8N6H7 521 aa17.53■□□□□ 0.4
PDLIM7-204ENST00000393546 GALNT11Q8NCW6 608 aa17.53■□□□□ 0.4
PDLIM7-204ENST00000393546 PSD4Q8NDX1 1056 aa17.53■□□□□ 0.4
PDLIM7-204ENST00000393546 ACTRT2Q8TDY3 377 aa17.53■□□□□ 0.4
PDLIM7-204ENST00000393546 MAGED4Q96JG8 741 aa17.53■□□□□ 0.4
PDLIM7-204ENST00000393546 NXF5Q9H1B4 397 aaKnown RBP17.53■□□□□ 0.4
PDLIM7-204ENST00000393546 MED4Q9NPJ6 270 aa17.53■□□□□ 0.4
PDLIM7-204ENST00000393546 OLAHQ9NV23 265 aa17.53■□□□□ 0.4
PDLIM7-204ENST00000393546 DDX18Q9NVP1 670 aaKnown RBP17.53■□□□□ 0.4
PDLIM7-204ENST00000393546 USH1CQ9Y6N9 552 aa17.53■□□□□ 0.4
PDLIM7-204ENST00000393546 RP1L1Q8IWN7 2480 aaPredicted RBP17.53■□□□□ 0.4
PDLIM7-204ENST00000393546 PYCARD-AS1I3L0S3 204 aa17.52■□□□□ 0.4
PDLIM7-204ENST00000393546 UPK1AO00322 258 aa17.52■□□□□ 0.4
PDLIM7-204ENST00000393546 ACOX3O15254 700 aa17.52■□□□□ 0.4
PDLIM7-204ENST00000393546 PEX1O43933 1283 aa17.52■□□□□ 0.4
PDLIM7-204ENST00000393546 TGDSO95455 350 aa17.52■□□□□ 0.4
PDLIM7-204ENST00000393546 P04436 131 aa17.52■□□□□ 0.4
PDLIM7-204ENST00000393546 TMED10P49755 219 aaKnown RBP17.52■□□□□ 0.4
PDLIM7-204ENST00000393546 PMP22Q01453 160 aa17.52■□□□□ 0.4
PDLIM7-204ENST00000393546 MLC1Q15049 377 aa17.52■□□□□ 0.4
PDLIM7-204ENST00000393546 PGS1Q32NB8 556 aa17.52■□□□□ 0.4
PDLIM7-204ENST00000393546 LSM12Q3MHD2 195 aaKnown RBP17.52■□□□□ 0.4
PDLIM7-204ENST00000393546 SLC9B1Q4ZJI4 515 aa17.52■□□□□ 0.4
PDLIM7-204ENST00000393546 SLC22A10Q63ZE4 541 aa17.52■□□□□ 0.4
PDLIM7-204ENST00000393546 OR2L13Q8N349 312 aa17.52■□□□□ 0.4
PDLIM7-204ENST00000393546 FAM13CQ8NE31 585 aa17.52■□□□□ 0.4
PDLIM7-204ENST00000393546 CEP70Q8NHQ1 597 aa17.52■□□□□ 0.4
PDLIM7-204ENST00000393546 NUDT8Q8WV74 236 aa17.52■□□□□ 0.4
PDLIM7-204ENST00000393546 MAELQ96JY0 434 aaKnown RBP17.52■□□□□ 0.4
PDLIM7-204ENST00000393546 DUSP26Q9BV47 211 aa17.52■□□□□ 0.4
PDLIM7-204ENST00000393546 BHLHE41Q9C0J9 482 aaPredicted RBP17.52■□□□□ 0.4
PDLIM7-204ENST00000393546 FOLH1BQ9HBA9 442 aa17.52■□□□□ 0.4
PDLIM7-204ENST00000393546 C3orf14Q9HBI5 128 aa17.52■□□□□ 0.4
PDLIM7-204ENST00000393546 SACM1LQ9NTJ5 587 aa17.52■□□□□ 0.4
PDLIM7-204ENST00000393546 GPR55Q9Y2T6 319 aaPredicted RBP17.52■□□□□ 0.4
PDLIM7-204ENST00000393546 SHANK1Q9Y566 2161 aa17.52■□□□□ 0.39
PDLIM7-204ENST00000393546 ASPDHA6ND91 283 aa17.51■□□□□ 0.39
PDLIM7-204ENST00000393546 ZNF195O14628 629 aa17.51■□□□□ 0.39
PDLIM7-204ENST00000393546 TP53I11O14683 189 aa17.51■□□□□ 0.39
PDLIM7-204ENST00000393546 DIAPH2O60879 1101 aa17.51■□□□□ 0.39
PDLIM7-204ENST00000393546 ERN1O75460 977 aaKnown RBP17.51■□□□□ 0.39
PDLIM7-204ENST00000393546 WISP1O95388 367 aa17.51■□□□□ 0.39
PDLIM7-204ENST00000393546 NAGAP17050 411 aa17.51■□□□□ 0.39
PDLIM7-204ENST00000393546 CNR1P21554 472 aa17.51■□□□□ 0.39
PDLIM7-204ENST00000393546 MEOX1P50221 254 aa17.51■□□□□ 0.39
PDLIM7-204ENST00000393546 SRSF11Q05519 484 aaKnown RBP17.51■□□□□ 0.39
PDLIM7-204ENST00000393546 RPS6KA2Q15349 733 aa17.51■□□□□ 0.39
PDLIM7-204ENST00000393546 NNATQ16517 81 aa17.51■□□□□ 0.39
PDLIM7-204ENST00000393546 NTRK2Q16620 822 aa17.51■□□□□ 0.39
PDLIM7-204ENST00000393546 EPGNQ6UW88 154 aa17.51■□□□□ 0.39
PDLIM7-204ENST00000393546 TMEM64Q6YI46 380 aa17.51■□□□□ 0.39
PDLIM7-204ENST00000393546 RGS9BPQ6ZS82 235 aa17.51■□□□□ 0.39
PDLIM7-204ENST00000393546 FAM47EQ6ZV65 393 aa17.51■□□□□ 0.39
PDLIM7-204ENST00000393546 MAVSQ7Z434 540 aa17.51■□□□□ 0.39
PDLIM7-204ENST00000393546 POGLUT1Q8NBL1 392 aa17.51■□□□□ 0.39
PDLIM7-204ENST00000393546 OR5P2Q8WZ92 322 aa17.51■□□□□ 0.39
PDLIM7-204ENST00000393546 VSTM2LQ96N03 204 aa17.51■□□□□ 0.39
PDLIM7-204ENST00000393546 AIG1Q9NVV5 245 aa17.51■□□□□ 0.39
PDLIM7-204ENST00000393546 FASNP49327 2511 aaKnown RBP17.5■□□□□ 0.39
PDLIM7-204ENST00000393546 FRG2CA6NGY1 282 aa17.5■□□□□ 0.39
PDLIM7-204ENST00000393546 TCP11X1B4DZS4 312 aa17.5■□□□□ 0.39
PDLIM7-204ENST00000393546 TO15178 435 aa17.5■□□□□ 0.39
PDLIM7-204ENST00000393546 ALDOCP09972 364 aaKnown RBP17.5■□□□□ 0.39
PDLIM7-204ENST00000393546 EFNA1P20827 205 aaPredicted RBP17.5■□□□□ 0.39
PDLIM7-204ENST00000393546 ABCD3P28288 659 aa17.5■□□□□ 0.39
PDLIM7-204ENST00000393546 CDK9P50750 372 aaKnown RBP17.5■□□□□ 0.39
PDLIM7-204ENST00000393546 CLNS1AP54105 237 aaKnown RBP17.5■□□□□ 0.39
PDLIM7-204ENST00000393546 GPR85P60893 370 aa17.5■□□□□ 0.39
PDLIM7-204ENST00000393546 PSPHP78330 225 aa17.5■□□□□ 0.39
PDLIM7-204ENST00000393546 RPP38P78345 283 aaKnown RBP17.5■□□□□ 0.39
PDLIM7-204ENST00000393546 ALDH6A1Q02252 535 aaKnown RBP17.5■□□□□ 0.39
PDLIM7-204ENST00000393546 ZNF155Q12901 538 aaPredicted RBP17.5■□□□□ 0.39
PDLIM7-204ENST00000393546 ZNF324BQ6AW86 544 aaPredicted RBP17.5■□□□□ 0.39
PDLIM7-204ENST00000393546 ACAD11Q709F0 780 aa17.5■□□□□ 0.39
PDLIM7-204ENST00000393546 CAMKMTQ7Z624 323 aa17.5■□□□□ 0.39
PDLIM7-204ENST00000393546 PRR22Q8IZ63 422 aa17.5■□□□□ 0.39
PDLIM7-204ENST00000393546 CPSF7Q8N684 471 aaKnown RBP17.5■□□□□ 0.39
PDLIM7-204ENST00000393546 NUP43Q8NFH3 380 aa17.5■□□□□ 0.39
PDLIM7-204ENST00000393546 OR5M3Q8NGP4 307 aa17.5■□□□□ 0.39
PDLIM7-204ENST00000393546 PAQR8Q8TEZ7 354 aa17.5■□□□□ 0.39
PDLIM7-204ENST00000393546 NR4A3Q92570 626 aa17.5■□□□□ 0.39
PDLIM7-204ENST00000393546 FRMD6Q96NE9 622 aa17.5■□□□□ 0.39
PDLIM7-204ENST00000393546 BTBD9Q96Q07 612 aa17.5■□□□□ 0.39
PDLIM7-204ENST00000393546 CNIH4Q9P003 139 aa17.5■□□□□ 0.39
PDLIM7-204ENST00000393546 EMC8O43402 210 aa17.49■□□□□ 0.39
PDLIM7-204ENST00000393546 NME6O75414 186 aaPredicted RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms