RNA–Protein interactions for RNA: ENST00000393278.6

MBD4-202, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 1 (best) BASIC

Gene MBD4, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-202ENST00000393278 GPAT3Q53EU6 434 aa16.35■□□□□ 0.21
MBD4-202ENST00000393278 ATAD3BQ5T9A4 648 aa16.35■□□□□ 0.21
MBD4-202ENST00000393278 HEPHL1Q6MZM0 1159 aa16.35■□□□□ 0.21
MBD4-202ENST00000393278 ZCCHC12Q6PEW1 402 aa16.35■□□□□ 0.21
MBD4-202ENST00000393278 SHQ1Q6PI26 577 aaKnown RBP16.35■□□□□ 0.21
MBD4-202ENST00000393278 WDR53Q7Z5U6 358 aaPredicted RBP16.35■□□□□ 0.21
MBD4-202ENST00000393278 HIPK1Q86Z02 1210 aa16.35■□□□□ 0.21
MBD4-202ENST00000393278 VWA5B2Q8N398 1253 aa16.35■□□□□ 0.21
MBD4-202ENST00000393278 MARVELD2Q8N4S9 558 aa16.35■□□□□ 0.21
MBD4-202ENST00000393278 GPR32P1Q8NGA4 272 aa16.35■□□□□ 0.21
MBD4-202ENST00000393278 MAGEE2Q8TD90 523 aaPredicted RBP16.35■□□□□ 0.21
MBD4-202ENST00000393278 RASSF5Q8WWW0 418 aa16.35■□□□□ 0.21
MBD4-202ENST00000393278 CCDC74BQ96LY2 380 aa16.35■□□□□ 0.21
MBD4-202ENST00000393278 TRNT1Q96Q11 434 aaKnown RBP16.35■□□□□ 0.21
MBD4-202ENST00000393278 OR1F2PQ96R84 312 aa16.35■□□□□ 0.21
MBD4-202ENST00000393278 NR1H4Q96RI1 486 aaPredicted RBP16.35■□□□□ 0.21
MBD4-202ENST00000393278 ALOXE3Q9BYJ1 711 aa16.35■□□□□ 0.21
MBD4-202ENST00000393278 CXorf21Q9HAI6 301 aa16.35■□□□□ 0.21
MBD4-202ENST00000393278 ADAP2Q9NPF8 381 aa16.35■□□□□ 0.21
MBD4-202ENST00000393278 EXD2Q9NVH0 621 aa16.35■□□□□ 0.21
MBD4-202ENST00000393278 CALML5Q9NZT1 146 aa16.35■□□□□ 0.21
MBD4-202ENST00000393278 A0A1B0GX78 115 aa16.34■□□□□ 0.21
MBD4-202ENST00000393278 JRKO75564 520 aa16.34■□□□□ 0.21
MBD4-202ENST00000393278 H6PDO95479 791 aa16.34■□□□□ 0.21
MBD4-202ENST00000393278 RECKO95980 971 aa16.34■□□□□ 0.21
MBD4-202ENST00000393278 HPRP00739 348 aa16.34■□□□□ 0.21
MBD4-202ENST00000393278 ALPLP05186 524 aa16.34■□□□□ 0.21
MBD4-202ENST00000393278 ACP2P11117 423 aa16.34■□□□□ 0.21
MBD4-202ENST00000393278 ITGA2P17301 1181 aa16.34■□□□□ 0.21
MBD4-202ENST00000393278 OR1E2P47887 323 aa16.34■□□□□ 0.21
MBD4-202ENST00000393278 KCNJ5P48544 419 aa16.34■□□□□ 0.21
MBD4-202ENST00000393278 DSG2Q14126 1118 aa16.34■□□□□ 0.21
MBD4-202ENST00000393278 CYP27C1Q4G0S4 372 aa16.34■□□□□ 0.21
MBD4-202ENST00000393278 PLA2G2CQ5R387 149 aa16.34■□□□□ 0.21
MBD4-202ENST00000393278 OLIG3Q7RTU3 272 aa16.34■□□□□ 0.21
MBD4-202ENST00000393278 GALNT12Q8IXK2 581 aa16.34■□□□□ 0.21
MBD4-202ENST00000393278 HS3ST5Q8IZT8 346 aa16.34■□□□□ 0.21
MBD4-202ENST00000393278 RCBTB1Q8NDN9 531 aa16.34■□□□□ 0.21
MBD4-202ENST00000393278 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.34■□□□□ 0.21
MBD4-202ENST00000393278 APOBEC4Q8WW27 367 aaKnown RBP16.34■□□□□ 0.21
MBD4-202ENST00000393278 SLC9A6Q92581 669 aa16.34■□□□□ 0.21
MBD4-202ENST00000393278 ZNF347Q96SE7 839 aa16.34■□□□□ 0.21
MBD4-202ENST00000393278 RSPO3Q9BXY4 272 aaPredicted RBP16.34■□□□□ 0.21
MBD4-202ENST00000393278 LANCL2Q9NS86 450 aa16.34■□□□□ 0.21
MBD4-202ENST00000393278 SMPD3Q9NY59 655 aaPredicted RBP16.34■□□□□ 0.21
MBD4-202ENST00000393278 USE1Q9NZ43 259 aa16.34■□□□□ 0.21
MBD4-202ENST00000393278 SEC14L3Q9UDX4 400 aa16.34■□□□□ 0.21
MBD4-202ENST00000393278 SH3GLB1Q9Y371 365 aa16.34■□□□□ 0.21
MBD4-202ENST00000393278 PCDHGB2Q9Y5G2 931 aa16.34■□□□□ 0.21
MBD4-202ENST00000393278 R4GN57 208 aa16.34■□□□□ 0.21
MBD4-202ENST00000393278 U3KQV3 271 aa16.34■□□□□ 0.21
MBD4-202ENST00000393278 GALR2O43603 387 aaPredicted RBP16.34■□□□□ 0.21
MBD4-202ENST00000393278 HYAL3O43820 417 aaPredicted RBP16.34■□□□□ 0.21
MBD4-202ENST00000393278 COQ9O75208 318 aa16.34■□□□□ 0.21
MBD4-202ENST00000393278 CBX7O95931 251 aa16.34■□□□□ 0.21
MBD4-202ENST00000393278 FESP07332 822 aa16.34■□□□□ 0.21
MBD4-202ENST00000393278 MAOAP21397 527 aa16.34■□□□□ 0.21
MBD4-202ENST00000393278 FPR1P21462 350 aa16.34■□□□□ 0.21
MBD4-202ENST00000393278 DNAJA1P31689 397 aaKnown RBP16.34■□□□□ 0.21
MBD4-202ENST00000393278 GRK6P43250 576 aa16.34■□□□□ 0.21
MBD4-202ENST00000393278 STT3AP46977 705 aa16.34■□□□□ 0.21
MBD4-202ENST00000393278 PPP2R2BQ00005 443 aa16.34■□□□□ 0.21
MBD4-202ENST00000393278 KCNC4Q03721 635 aa16.34■□□□□ 0.21
MBD4-202ENST00000393278 SERTAD2Q14140 314 aa16.34■□□□□ 0.21
MBD4-202ENST00000393278 EXOSC7Q15024 291 aaKnown RBP16.34■□□□□ 0.21
MBD4-202ENST00000393278 DUSP5Q16690 384 aa16.34■□□□□ 0.21
MBD4-202ENST00000393278 DBX2Q6ZNG2 339 aa16.34■□□□□ 0.21
MBD4-202ENST00000393278 PRR23CQ6ZRP0 262 aa16.34■□□□□ 0.21
MBD4-202ENST00000393278 C16orf62Q7Z3J2 963 aa16.34■□□□□ 0.21
MBD4-202ENST00000393278 CDRT4Q8N9R6 151 aa16.34■□□□□ 0.21
MBD4-202ENST00000393278 TFAP2CQ92754 450 aa16.34■□□□□ 0.21
MBD4-202ENST00000393278 CDS1Q92903 461 aa16.34■□□□□ 0.21
MBD4-202ENST00000393278 RIT1Q92963 219 aa16.34■□□□□ 0.21
MBD4-202ENST00000393278 RBM18Q96H35 190 aaKnown RBP16.34■□□□□ 0.21
MBD4-202ENST00000393278 DGAT2Q96PD7 388 aa16.34■□□□□ 0.21
MBD4-202ENST00000393278 ZNF300Q96RE9 604 aaPredicted RBP16.34■□□□□ 0.21
MBD4-202ENST00000393278 GFM1Q96RP9 751 aaKnown RBP16.34■□□□□ 0.21
MBD4-202ENST00000393278 SPATA5L1Q9BVQ7 753 aa16.34■□□□□ 0.21
MBD4-202ENST00000393278 OSBPL10Q9BXB5 764 aa16.34■□□□□ 0.21
MBD4-202ENST00000393278 SLC38A1Q9H2H9 487 aa16.34■□□□□ 0.21
MBD4-202ENST00000393278 PIGUQ9H490 435 aa16.34■□□□□ 0.21
MBD4-202ENST00000393278 REEP1Q9H902 201 aa16.34■□□□□ 0.21
MBD4-202ENST00000393278 ZNF304Q9HCX3 659 aa16.34■□□□□ 0.21
MBD4-202ENST00000393278 IFT80Q9P2H3 777 aaPredicted RBP16.34■□□□□ 0.21
MBD4-202ENST00000393278 SRPK3Q9UPE1 567 aa16.34■□□□□ 0.21
MBD4-202ENST00000393278 MMACHCQ9Y4U1 282 aa16.34■□□□□ 0.21
MBD4-202ENST00000393278 DSPPQ9NZW4 1301 aa16.33■□□□□ 0.21
MBD4-202ENST00000393278 OR2W5A6NFC9 320 aa16.33■□□□□ 0.2
MBD4-202ENST00000393278 NTN3O00634 580 aaPredicted RBP16.33■□□□□ 0.2
MBD4-202ENST00000393278 S1PR1P21453 382 aa16.33■□□□□ 0.2
MBD4-202ENST00000393278 FBLP22087 321 aaKnown RBP16.33■□□□□ 0.2
MBD4-202ENST00000393278 BIKQ13323 160 aa16.33■□□□□ 0.2
MBD4-202ENST00000393278 PUM1Q14671 1186 aaKnown RBP eCLIP16.33■□□□□ 0.23e-6■■■□□ 17.7
MBD4-202ENST00000393278 PDK3Q15120 406 aa16.33■□□□□ 0.2
MBD4-202ENST00000393278 SLITRK4Q8IW52 837 aa16.33■□□□□ 0.2
MBD4-202ENST00000393278 CHERPQ8IWX8 916 aaKnown RBP16.33■□□□□ 0.2
MBD4-202ENST00000393278 OR52R1Q8NGF1 315 aa16.33■□□□□ 0.2
MBD4-202ENST00000393278 PROX1Q92786 737 aa16.33■□□□□ 0.2
MBD4-202ENST00000393278 NRBF2Q96F24 287 aa16.33■□□□□ 0.2
MBD4-202ENST00000393278 ZNF354BQ96LW1 612 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms