RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 PDPK1O15530 556 aa11.66□□□□□ -0.54
GGPS1-203ENST00000391855 LYPLA1O75608 230 aaPredicted RBP11.66□□□□□ -0.54
GGPS1-203ENST00000391855 PPM1BO75688 479 aa11.66□□□□□ -0.54
GGPS1-203ENST00000391855 SNX4O95219 450 aa11.66□□□□□ -0.54
GGPS1-203ENST00000391855 PRPS2P11908 318 aa11.66□□□□□ -0.54
GGPS1-203ENST00000391855 GP1BBP13224 206 aa11.66□□□□□ -0.54
GGPS1-203ENST00000391855 TACR1P25103 407 aa11.66□□□□□ -0.54
GGPS1-203ENST00000391855 ABCD3P28288 659 aa11.66□□□□□ -0.54
GGPS1-203ENST00000391855 RFC3P40938 356 aa11.66□□□□□ -0.54
GGPS1-203ENST00000391855 DNASE1L1P49184 302 aa11.66□□□□□ -0.54
GGPS1-203ENST00000391855 EMDP50402 254 aa11.66□□□□□ -0.54
GGPS1-203ENST00000391855 NCBP2P52298 156 aaKnown RBP eCLIP11.66□□□□□ -0.54
GGPS1-203ENST00000391855 SLC18A1P54219 525 aa11.66□□□□□ -0.54
GGPS1-203ENST00000391855 ABCE1P61221 599 aaKnown RBP11.66□□□□□ -0.54
GGPS1-203ENST00000391855 KCNJ2P63252 427 aa11.66□□□□□ -0.54
GGPS1-203ENST00000391855 PLCXD2Q0VAA5 305 aa11.66□□□□□ -0.54
GGPS1-203ENST00000391855 DUSP8Q13202 625 aa11.66□□□□□ -0.54
GGPS1-203ENST00000391855 MAD2L1Q13257 205 aaPredicted RBP11.66□□□□□ -0.54
GGPS1-203ENST00000391855 PDE7AQ13946 482 aa11.66□□□□□ -0.54
GGPS1-203ENST00000391855 GALNTL6Q49A17 601 aa11.66□□□□□ -0.54
GGPS1-203ENST00000391855 ATP6AP1LQ52LC2 224 aa11.66□□□□□ -0.54
GGPS1-203ENST00000391855 RFTN2Q52LD8 501 aaPredicted RBP11.66□□□□□ -0.54
GGPS1-203ENST00000391855 HHATQ5VTY9 493 aa11.66□□□□□ -0.54
GGPS1-203ENST00000391855 FAM180BQ6P0A1 224 aa11.66□□□□□ -0.54
GGPS1-203ENST00000391855 TMEM81Q6P7N7 255 aa11.66□□□□□ -0.54
GGPS1-203ENST00000391855 R3HCC1LQ7Z5L2 792 aaKnown RBP11.66□□□□□ -0.54
GGPS1-203ENST00000391855 SLC34A3Q8N130 599 aa11.66□□□□□ -0.54
GGPS1-203ENST00000391855 SPPL2AQ8TCT8 520 aa11.66□□□□□ -0.54
GGPS1-203ENST00000391855 AGR3Q8TD06 166 aa11.66□□□□□ -0.54
GGPS1-203ENST00000391855 PPCDCQ96CD2 204 aa11.66□□□□□ -0.54
GGPS1-203ENST00000391855 ZNF597Q96LX8 424 aa11.66□□□□□ -0.54
GGPS1-203ENST00000391855 BTBD9Q96Q07 612 aa11.66□□□□□ -0.54
GGPS1-203ENST00000391855 HS3ST6Q96QI5 342 aa11.66□□□□□ -0.54
GGPS1-203ENST00000391855 DOHHQ9BU89 302 aa11.66□□□□□ -0.54
GGPS1-203ENST00000391855 TAS2R9Q9NYW1 312 aa11.66□□□□□ -0.54
GGPS1-203ENST00000391855 ZDHHC2Q9UIJ5 367 aa11.66□□□□□ -0.54
GGPS1-203ENST00000391855 DTX4Q9Y2E6 619 aa11.66□□□□□ -0.54
GGPS1-203ENST00000391855 RAP2CQ9Y3L5 183 aa11.66□□□□□ -0.54
GGPS1-203ENST00000391855 A0A0G2JMM0 328 aa11.65□□□□□ -0.54
GGPS1-203ENST00000391855 A0A1W2PPB8 328 aa11.65□□□□□ -0.54
GGPS1-203ENST00000391855 A0A1W2PRS3 328 aa11.65□□□□□ -0.54
GGPS1-203ENST00000391855 WDR91A4D1P6 747 aa11.65□□□□□ -0.54
GGPS1-203ENST00000391855 PINLYPA6NC86 204 aa11.65□□□□□ -0.54
GGPS1-203ENST00000391855 TTC36A6NLP5 189 aa11.65□□□□□ -0.54
GGPS1-203ENST00000391855 KIR3DP1A8MWS1 328 aa11.65□□□□□ -0.54
GGPS1-203ENST00000391855 G3V3Y1 287 aa11.65□□□□□ -0.54
GGPS1-203ENST00000391855 SKAP2O75563 359 aaPredicted RBP11.65□□□□□ -0.54
GGPS1-203ENST00000391855 IGHG3P01860 377 aa11.65□□□□□ -0.54
GGPS1-203ENST00000391855 ARRB2P32121 409 aa11.65□□□□□ -0.54
GGPS1-203ENST00000391855 PTGER1P34995 402 aa11.65□□□□□ -0.54
GGPS1-203ENST00000391855 PTGS2P35354 604 aa11.65□□□□□ -0.54
GGPS1-203ENST00000391855 SOX18P35713 384 aa11.65□□□□□ -0.54
GGPS1-203ENST00000391855 HPCAL1P37235 193 aa11.65□□□□□ -0.54
GGPS1-203ENST00000391855 PIGAP37287 484 aa11.65□□□□□ -0.54
GGPS1-203ENST00000391855 FOXO1Q12778 655 aa11.65□□□□□ -0.54
GGPS1-203ENST00000391855 SMU1Q2TAY7 513 aa11.65□□□□□ -0.54
GGPS1-203ENST00000391855 PRAMEF20Q5VT98 475 aa11.65□□□□□ -0.54
GGPS1-203ENST00000391855 RPTNQ6XPR3 784 aa11.65□□□□□ -0.54
GGPS1-203ENST00000391855 NUP54Q7Z3B4 507 aa11.65□□□□□ -0.54
GGPS1-203ENST00000391855 FJX1Q86VR8 437 aa11.65□□□□□ -0.54
GGPS1-203ENST00000391855 TMEM251Q8N6I4 163 aa11.65□□□□□ -0.54
GGPS1-203ENST00000391855 NATD1Q8N6N6 113 aa11.65□□□□□ -0.54
GGPS1-203ENST00000391855 OR7G2Q8NG99 324 aa11.65□□□□□ -0.54
GGPS1-203ENST00000391855 FAM57AQ8TBR7 257 aa11.65□□□□□ -0.54
GGPS1-203ENST00000391855 DIO2Q92813 273 aa11.65□□□□□ -0.54
GGPS1-203ENST00000391855 KAT2AQ92830 837 aa11.65□□□□□ -0.54
GGPS1-203ENST00000391855 OMA1Q96E52 524 aa11.65□□□□□ -0.54
GGPS1-203ENST00000391855 ZBED6CLQ96FA7 236 aaPredicted RBP11.65□□□□□ -0.54
GGPS1-203ENST00000391855 VSTM2LQ96N03 204 aa11.65□□□□□ -0.54
GGPS1-203ENST00000391855 AMDHD1Q96NU7 426 aa11.65□□□□□ -0.54
GGPS1-203ENST00000391855 TSSK3Q96PN8 268 aa11.65□□□□□ -0.54
GGPS1-203ENST00000391855 GLIPR2Q9H4G4 154 aa11.65□□□□□ -0.54
GGPS1-203ENST00000391855 ZFP64Q9NPA5 681 aa11.65□□□□□ -0.54
GGPS1-203ENST00000391855 DDX18Q9NVP1 670 aaKnown RBP11.65□□□□□ -0.54
GGPS1-203ENST00000391855 TUBA8Q9NY65 449 aaPredicted RBP11.65□□□□□ -0.54
GGPS1-203ENST00000391855 HAO1Q9UJM8 370 aa11.65□□□□□ -0.54
GGPS1-203ENST00000391855 C19orf53Q9UNZ5 99 aaPredicted RBP11.65□□□□□ -0.54
GGPS1-203ENST00000391855 MAPRE3Q9UPY8 281 aa11.65□□□□□ -0.54
GGPS1-203ENST00000391855 EXO1Q9UQ84 846 aaKnown RBP11.65□□□□□ -0.54
GGPS1-203ENST00000391855 GPR55Q9Y2T6 319 aaPredicted RBP11.65□□□□□ -0.54
GGPS1-203ENST00000391855 DOPEY2Q9Y3R5 2298 aa11.64□□□□□ -0.55
GGPS1-203ENST00000391855 TMEM120BA0PK00 339 aa11.64□□□□□ -0.55
GGPS1-203ENST00000391855 OR14I1A6ND48 311 aa11.64□□□□□ -0.55
GGPS1-203ENST00000391855 FAM166BA8MTA8 275 aa11.64□□□□□ -0.55
GGPS1-203ENST00000391855 CCL21O00585 134 aa11.64□□□□□ -0.55
GGPS1-203ENST00000391855 CDC40O60508 579 aaKnown RBP eCLIP11.64□□□□□ -0.55
GGPS1-203ENST00000391855 ERN1O75460 977 aaKnown RBP11.64□□□□□ -0.55
GGPS1-203ENST00000391855 JUNP05412 331 aaKnown RBP11.64□□□□□ -0.55
GGPS1-203ENST00000391855 ESRRAP11474 423 aaPredicted RBP11.64□□□□□ -0.55
GGPS1-203ENST00000391855 BCKDHAP12694 445 aa11.64□□□□□ -0.55
GGPS1-203ENST00000391855 KRT20P35900 424 aa11.64□□□□□ -0.55
GGPS1-203ENST00000391855 MC3RP41968 323 aa11.64□□□□□ -0.55
GGPS1-203ENST00000391855 SLC1A6P48664 564 aa11.64□□□□□ -0.55
GGPS1-203ENST00000391855 FBXW4P57775 412 aa11.64□□□□□ -0.55
GGPS1-203ENST00000391855 MRPS22P82650 360 aaKnown RBP11.64□□□□□ -0.55
GGPS1-203ENST00000391855 ZNF155Q12901 538 aaPredicted RBP11.64□□□□□ -0.55
GGPS1-203ENST00000391855 STX3Q13277 289 aa11.64□□□□□ -0.55
GGPS1-203ENST00000391855 NNATQ16517 81 aa11.64□□□□□ -0.55
GGPS1-203ENST00000391855 C3AR1Q16581 482 aa11.64□□□□□ -0.55
GGPS1-203ENST00000391855 C6orf136Q5SQH8 315 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms