RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 TMEM14AQ9Y6G1 99 aa18.75■□□□□ 0.59
SHANK1-203ENST00000391813 UNC119BA6NIH7 251 aa18.75■□□□□ 0.59
SHANK1-203ENST00000391813 PCCBP05166 539 aa18.75■□□□□ 0.59
SHANK1-203ENST00000391813 HOXA11P31270 313 aaPredicted RBP18.75■□□□□ 0.59
SHANK1-203ENST00000391813 CAPZA1P52907 286 aa18.75■□□□□ 0.59
SHANK1-203ENST00000391813 PM20D1Q6GTS8 502 aa18.75■□□□□ 0.59
SHANK1-203ENST00000391813 ZNF783Q6ZMS7 281 aa18.75■□□□□ 0.59
SHANK1-203ENST00000391813 GALNT7Q86SF2 657 aa18.75■□□□□ 0.59
SHANK1-203ENST00000391813 RETREG3Q86VR2 466 aa18.75■□□□□ 0.59
SHANK1-203ENST00000391813 TMPRSS12Q86WS5 348 aa18.75■□□□□ 0.59
SHANK1-203ENST00000391813 C3orf30Q96M34 536 aa18.75■□□□□ 0.59
SHANK1-203ENST00000391813 RBFOX1Q9NWB1 397 aaKnown RBP18.75■□□□□ 0.59
SHANK1-203ENST00000391813 WNT6Q9Y6F9 365 aa18.75■□□□□ 0.59
SHANK1-203ENST00000391813 LEFTY2O00292 366 aa18.74■□□□□ 0.59
SHANK1-203ENST00000391813 PDGFAP04085 211 aa18.74■□□□□ 0.59
SHANK1-203ENST00000391813 OR12D1P0DN82 309 aa18.74■□□□□ 0.59
SHANK1-203ENST00000391813 SRCP12931 536 aa18.74■□□□□ 0.59
SHANK1-203ENST00000391813 ACVR1BP36896 505 aa18.74■□□□□ 0.59
SHANK1-203ENST00000391813 DDOSTP39656 456 aa18.74■□□□□ 0.59
SHANK1-203ENST00000391813 SOX3P41225 446 aa18.74■□□□□ 0.59
SHANK1-203ENST00000391813 SOX2P48431 317 aa18.74■□□□□ 0.59
SHANK1-203ENST00000391813 C6orf120Q7Z4R8 191 aa18.74■□□□□ 0.59
SHANK1-203ENST00000391813 DCUN1D3Q8IWE4 304 aa18.74■□□□□ 0.59
SHANK1-203ENST00000391813 DHRS1Q96LJ7 313 aa18.74■□□□□ 0.59
SHANK1-203ENST00000391813 PBDC1Q9BVG4 233 aa18.74■□□□□ 0.59
SHANK1-203ENST00000391813 SLC6A16Q9GZN6 736 aa18.74■□□□□ 0.59
SHANK1-203ENST00000391813 BTNL2Q9UIR0 455 aa18.74■□□□□ 0.59
SHANK1-203ENST00000391813 PCDHA9Q9Y5H5 950 aa18.74■□□□□ 0.59
SHANK1-203ENST00000391813 MAN2B1O00754 1011 aa18.74■□□□□ 0.59
SHANK1-203ENST00000391813 MRPL3P09001 348 aaKnown RBP18.74■□□□□ 0.59
SHANK1-203ENST00000391813 NDUFS1P28331 727 aa18.74■□□□□ 0.59
SHANK1-203ENST00000391813 MLLT3P42568 568 aaPredicted RBP18.74■□□□□ 0.59
SHANK1-203ENST00000391813 DLX5P56178 289 aa18.74■□□□□ 0.59
SHANK1-203ENST00000391813 RAB40BQ12829 278 aa18.74■□□□□ 0.59
SHANK1-203ENST00000391813 NUS1Q96E22 293 aa18.74■□□□□ 0.59
SHANK1-203ENST00000391813 NKX2-4Q9H2Z4 354 aa18.74■□□□□ 0.59
SHANK1-203ENST00000391813 SMAD9O15198 467 aaKnown RBP18.74■□□□□ 0.59
SHANK1-203ENST00000391813 POP7O75817 140 aaKnown RBP18.74■□□□□ 0.59
SHANK1-203ENST00000391813 SCGB1D2O95969 90 aa18.74■□□□□ 0.59
SHANK1-203ENST00000391813 CLECL1Q8IZS7 167 aa18.74■□□□□ 0.59
SHANK1-203ENST00000391813 DTX3Q8N9I9 347 aa18.74■□□□□ 0.59
SHANK1-203ENST00000391813 ANKK1Q8NFD2 765 aa18.74■□□□□ 0.59
SHANK1-203ENST00000391813 MFFQ9GZY8 342 aa18.74■□□□□ 0.59
SHANK1-203ENST00000391813 CENPMQ9NSP4 180 aa18.74■□□□□ 0.59
SHANK1-203ENST00000391813 HSPA12AO43301 675 aa18.74■□□□□ 0.59
SHANK1-203ENST00000391813 PPM1BO75688 479 aa18.74■□□□□ 0.59
SHANK1-203ENST00000391813 TAP2Q03519 686 aa18.74■□□□□ 0.59
SHANK1-203ENST00000391813 FAPQ12884 760 aa18.74■□□□□ 0.59
SHANK1-203ENST00000391813 DOC2AQ14183 400 aa18.74■□□□□ 0.59
SHANK1-203ENST00000391813 PTRH1Q86Y79 214 aaKnown RBP18.74■□□□□ 0.59
SHANK1-203ENST00000391813 TMEM145Q8NBT3 493 aa18.74■□□□□ 0.59
SHANK1-203ENST00000391813 GGHQ92820 318 aa18.74■□□□□ 0.59
SHANK1-203ENST00000391813 FKBP10Q96AY3 582 aa18.74■□□□□ 0.59
SHANK1-203ENST00000391813 SRMSQ9H3Y6 488 aa18.74■□□□□ 0.59
SHANK1-203ENST00000391813 MYH13Q9UKX3 1938 aa18.73■□□□□ 0.59
SHANK1-203ENST00000391813 SULT1C2O00338 296 aa18.73■□□□□ 0.59
SHANK1-203ENST00000391813 SLC16A6O15403 523 aa18.73■□□□□ 0.59
SHANK1-203ENST00000391813 ACRV1P26436 265 aa18.73■□□□□ 0.59
SHANK1-203ENST00000391813 CYCSP99999 105 aaKnown RBP18.73■□□□□ 0.59
SHANK1-203ENST00000391813 BEST4Q8NFU0 473 aa18.73■□□□□ 0.59
SHANK1-203ENST00000391813 OR9Q2Q8NGE9 314 aa18.73■□□□□ 0.59
SHANK1-203ENST00000391813 HMGB4Q8WW32 186 aa18.73■□□□□ 0.59
SHANK1-203ENST00000391813 PDLIM7Q9NR12 457 aa18.73■□□□□ 0.59
SHANK1-203ENST00000391813 GLTPQ9NZD2 209 aa18.73■□□□□ 0.59
SHANK1-203ENST00000391813 F5H5P2 479 aa18.73■□□□□ 0.59
SHANK1-203ENST00000391813 ALDOBP05062 364 aa18.73■□□□□ 0.59
SHANK1-203ENST00000391813 ALDOCP09972 364 aaKnown RBP18.73■□□□□ 0.59
SHANK1-203ENST00000391813 LAMP1P11279 417 aa18.73■□□□□ 0.59
SHANK1-203ENST00000391813 HLA-EP13747 358 aa18.73■□□□□ 0.59
SHANK1-203ENST00000391813 TYRP14679 529 aa18.73■□□□□ 0.59
SHANK1-203ENST00000391813 PFKLP17858 780 aa18.73■□□□□ 0.59
SHANK1-203ENST00000391813 GABRB3P28472 473 aa18.73■□□□□ 0.59
SHANK1-203ENST00000391813 LRRC28Q86X40 367 aaPredicted RBP18.73■□□□□ 0.59
SHANK1-203ENST00000391813 SLC7A13Q8TCU3 470 aa18.73■□□□□ 0.59
SHANK1-203ENST00000391813 RIT1Q92963 219 aa18.73■□□□□ 0.59
SHANK1-203ENST00000391813 HS6ST2Q96MM7 605 aa18.73■□□□□ 0.59
SHANK1-203ENST00000391813 SIAEQ9HAT2 523 aa18.73■□□□□ 0.59
SHANK1-203ENST00000391813 IL36AQ9UHA7 158 aa18.73■□□□□ 0.59
SHANK1-203ENST00000391813 NAV1Q8NEY1 1877 aa18.73■□□□□ 0.59
SHANK1-203ENST00000391813 CXCR1P25024 350 aa18.73■□□□□ 0.59
SHANK1-203ENST00000391813 CBFBQ13951 182 aa18.73■□□□□ 0.59
SHANK1-203ENST00000391813 ZNF791Q3KP31 576 aaPredicted RBP18.73■□□□□ 0.59
SHANK1-203ENST00000391813 LRRC73Q5JTD7 316 aa18.73■□□□□ 0.59
SHANK1-203ENST00000391813 FRMPD2BQ6IN97 320 aa18.73■□□□□ 0.59
SHANK1-203ENST00000391813 B3GNT9Q6UX72 402 aa18.73■□□□□ 0.59
SHANK1-203ENST00000391813 CBLL1Q75N03 491 aa18.73■□□□□ 0.59
SHANK1-203ENST00000391813 PROKR1Q8TCW9 393 aa18.73■□□□□ 0.59
SHANK1-203ENST00000391813 CNTNAP3BQ96NU0 1288 aa18.73■□□□□ 0.59
SHANK1-203ENST00000391813 RHPN2P1A8MT19 583 aa18.73■□□□□ 0.59
SHANK1-203ENST00000391813 HMGCLP35914 325 aa18.73■□□□□ 0.59
SHANK1-203ENST00000391813 EIF2S3LQ2VIR3 472 aaKnown RBP18.73■□□□□ 0.59
SHANK1-203ENST00000391813 UGT3A2Q3SY77 523 aa18.73■□□□□ 0.59
SHANK1-203ENST00000391813 ZNF789Q5FWF6 425 aa18.73■□□□□ 0.59
SHANK1-203ENST00000391813 RTL10Q7L3V2 364 aa18.73■□□□□ 0.59
SHANK1-203ENST00000391813 MAVSQ7Z434 540 aa18.73■□□□□ 0.59
SHANK1-203ENST00000391813 TP53INP2Q8IXH6 220 aa18.73■□□□□ 0.59
SHANK1-203ENST00000391813 SLC22A15Q8IZD6 547 aa18.73■□□□□ 0.59
SHANK1-203ENST00000391813 CMTM8Q8IZV2 173 aa18.73■□□□□ 0.59
SHANK1-203ENST00000391813 TESCQ96BS2 214 aa18.73■□□□□ 0.59
SHANK1-203ENST00000391813 RDH14Q9HBH5 336 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms