RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 OTX2P32243 289 aa0.2□□□□□ -2.38
RNU6-239P-201ENST00000390990 UGT1A5P35504 534 aa0.2□□□□□ -2.38
RNU6-239P-201ENST00000390990 CCR4P51679 360 aa0.2□□□□□ -2.38
RNU6-239P-201ENST00000390990 ACTA2P62736 377 aa0.2□□□□□ -2.38
RNU6-239P-201ENST00000390990 ACTC1P68032 377 aa0.2□□□□□ -2.38
RNU6-239P-201ENST00000390990 DDX10Q13206 875 aaKnown RBP0.2□□□□□ -2.38
RNU6-239P-201ENST00000390990 DPYSL3Q14195 570 aa0.2□□□□□ -2.38
RNU6-239P-201ENST00000390990 PSMD6Q15008 389 aa0.2□□□□□ -2.38
RNU6-239P-201ENST00000390990 P2RY14Q15391 338 aa0.2□□□□□ -2.38
RNU6-239P-201ENST00000390990 CMPK2Q5EBM0 449 aa0.2□□□□□ -2.38
RNU6-239P-201ENST00000390990 RHBDD2Q6NTF9 364 aa0.2□□□□□ -2.38
RNU6-239P-201ENST00000390990 UNC5DQ6UXZ4 953 aa0.2□□□□□ -2.38
RNU6-239P-201ENST00000390990 MMS22LQ6ZRQ5 1243 aa0.2□□□□□ -2.38
RNU6-239P-201ENST00000390990 RNF165Q6ZSG1 346 aa0.2□□□□□ -2.38
RNU6-239P-201ENST00000390990 ITIH5Q86UX2 942 aa0.2□□□□□ -2.38
RNU6-239P-201ENST00000390990 PPP1R27Q86WC6 154 aa0.2□□□□□ -2.38
RNU6-239P-201ENST00000390990 ERICH1Q86X53 443 aa0.2□□□□□ -2.38
RNU6-239P-201ENST00000390990 CCDC197Q8NCU1 140 aa0.2□□□□□ -2.38
RNU6-239P-201ENST00000390990 DUSP18Q8NEJ0 188 aa0.2□□□□□ -2.38
RNU6-239P-201ENST00000390990 OR51G1Q8NGK1 321 aa0.2□□□□□ -2.38
RNU6-239P-201ENST00000390990 UBTD2Q8WUN7 234 aa0.2□□□□□ -2.38
RNU6-239P-201ENST00000390990 FAM210BQ96KR6 192 aa0.2□□□□□ -2.38
RNU6-239P-201ENST00000390990 CAPNS2Q96L46 248 aa0.2□□□□□ -2.38
RNU6-239P-201ENST00000390990 PRAM1Q96QH2 718 aa0.2□□□□□ -2.38
RNU6-239P-201ENST00000390990 TM2D1Q9BX74 207 aa0.2□□□□□ -2.38
RNU6-239P-201ENST00000390990 FUT8Q9BYC5 575 aa0.2□□□□□ -2.38
RNU6-239P-201ENST00000390990 ZNF350Q9GZX5 532 aa0.2□□□□□ -2.38
RNU6-239P-201ENST00000390990 GHITMQ9H3K2 345 aa0.2□□□□□ -2.38
RNU6-239P-201ENST00000390990 TPK1Q9H3S4 243 aa0.2□□□□□ -2.38
RNU6-239P-201ENST00000390990 SLC25A19Q9HC21 320 aa0.2□□□□□ -2.38
RNU6-239P-201ENST00000390990 ABCB8Q9NUT2 735 aa0.2□□□□□ -2.38
RNU6-239P-201ENST00000390990 CPSF2Q9P2I0 782 aaKnown RBP0.2□□□□□ -2.38
RNU6-239P-201ENST00000390990 ADD3Q9UEY8 706 aaKnown RBP0.2□□□□□ -2.38
RNU6-239P-201ENST00000390990 FZR1Q9UM11 496 aa0.2□□□□□ -2.38
RNU6-239P-201ENST00000390990 CABIN1Q9Y6J0 2220 aa0.19□□□□□ -2.38
RNU6-239P-201ENST00000390990 PLA2R1Q13018 1463 aa0.19□□□□□ -2.38
RNU6-239P-201ENST00000390990 TRAV40A0A0B4J280 105 aa0.19□□□□□ -2.38
RNU6-239P-201ENST00000390990 hCG_1807616A0A1W2PRN6 198 aa0.19□□□□□ -2.38
RNU6-239P-201ENST00000390990 GTPBP10A4D1E9 387 aaKnown RBP0.19□□□□□ -2.38
RNU6-239P-201ENST00000390990 ZNF878C9JN71 531 aa0.19□□□□□ -2.38
RNU6-239P-201ENST00000390990 C11orf94C9JXX5 98 aa0.19□□□□□ -2.38
RNU6-239P-201ENST00000390990 ADAM20O43506 726 aa0.19□□□□□ -2.38
RNU6-239P-201ENST00000390990 RHOXF2BP0C7M4 288 aa0.19□□□□□ -2.38
RNU6-239P-201ENST00000390990 LBPP18428 481 aa0.19□□□□□ -2.38
RNU6-239P-201ENST00000390990 HNF1AP20823 631 aa0.19□□□□□ -2.38
RNU6-239P-201ENST00000390990 OR1D2P34982 312 aa0.19□□□□□ -2.38
RNU6-239P-201ENST00000390990 RXRGP48443 463 aa0.19□□□□□ -2.38
RNU6-239P-201ENST00000390990 FKBP1BP68106 108 aa0.19□□□□□ -2.38
RNU6-239P-201ENST00000390990 OTUD4Q01804 1114 aaKnown RBP0.19□□□□□ -2.38
RNU6-239P-201ENST00000390990 MZT1Q08AG7 82 aa0.19□□□□□ -2.38
RNU6-239P-201ENST00000390990 STK4Q13043 487 aa0.19□□□□□ -2.38
RNU6-239P-201ENST00000390990 DNLZQ5SXM8 178 aa0.19□□□□□ -2.38
RNU6-239P-201ENST00000390990 JAKMIP3Q5VZ66 844 aa0.19□□□□□ -2.38
RNU6-239P-201ENST00000390990 GALNT17Q6IS24 598 aa0.19□□□□□ -2.38
RNU6-239P-201ENST00000390990 C17orf64Q86WR6 236 aa0.19□□□□□ -2.38
RNU6-239P-201ENST00000390990 MEX3DQ86XN8 651 aaKnown RBP0.19□□□□□ -2.38
RNU6-239P-201ENST00000390990 CYB561D1Q8N8Q1 229 aa0.19□□□□□ -2.38
RNU6-239P-201ENST00000390990 OR52P1PQ8NH57 321 aa0.19□□□□□ -2.38
RNU6-239P-201ENST00000390990 OR6X1Q8NH79 312 aa0.19□□□□□ -2.38
RNU6-239P-201ENST00000390990 RAD54LQ92698 747 aa0.19□□□□□ -2.38
RNU6-239P-201ENST00000390990 CEP170P1Q96L14 293 aa0.19□□□□□ -2.38
RNU6-239P-201ENST00000390990 C19orf43Q9BQ61 176 aa0.19□□□□□ -2.38
RNU6-239P-201ENST00000390990 PELOQ9BRX2 385 aaKnown RBP0.19□□□□□ -2.38
RNU6-239P-201ENST00000390990 ESM1Q9NQ30 184 aa0.19□□□□□ -2.38
RNU6-239P-201ENST00000390990 NANSQ9NR45 359 aa0.19□□□□□ -2.38
RNU6-239P-201ENST00000390990 CENPMQ9NSP4 180 aa0.19□□□□□ -2.38
RNU6-239P-201ENST00000390990 PDRG1Q9NUG6 133 aa0.19□□□□□ -2.38
RNU6-239P-201ENST00000390990 HAUS2Q9NVX0 235 aa0.19□□□□□ -2.38
RNU6-239P-201ENST00000390990 PLEK2Q9NYT0 353 aa0.19□□□□□ -2.38
RNU6-239P-201ENST00000390990 CD274Q9NZQ7 290 aa0.19□□□□□ -2.38
RNU6-239P-201ENST00000390990 PRPF19Q9UMS4 504 aaKnown RBP0.19□□□□□ -2.38
RNU6-239P-201ENST00000390990 PCDHGB4Q9UN71 923 aa0.19□□□□□ -2.38
RNU6-239P-201ENST00000390990 TRPV2Q9Y5S1 764 aa0.19□□□□□ -2.38
RNU6-239P-201ENST00000390990 TEX264Q9Y6I9 313 aa0.19□□□□□ -2.38
RNU6-239P-201ENST00000390990 COL11A1P12107 1806 aaPredicted RBP0.19□□□□□ -2.38
RNU6-239P-201ENST00000390990 RSF1Q96T23 1441 aaPredicted RBP0.19□□□□□ -2.38
RNU6-239P-201ENST00000390990 SHROOM3Q8TF72 1996 aa0.19□□□□□ -2.38
RNU6-239P-201ENST00000390990 ATP6AP2A0A1C7CYW4 349 aa0.18□□□□□ -2.38
RNU6-239P-201ENST00000390990 SH3PXD2BA1X283 911 aa0.18□□□□□ -2.38
RNU6-239P-201ENST00000390990 GSAPA4D1B5 854 aa0.18□□□□□ -2.38
RNU6-239P-201ENST00000390990 PPIP5K2O43314 1243 aa0.18□□□□□ -2.38
RNU6-239P-201ENST00000390990 TBL1XO60907 577 aa0.18□□□□□ -2.38
RNU6-239P-201ENST00000390990 SPAG7O75391 227 aa0.18□□□□□ -2.38
RNU6-239P-201ENST00000390990 RCBTB2O95199 551 aa0.18□□□□□ -2.38
RNU6-239P-201ENST00000390990 H2AFZP0C0S5 128 aa0.18□□□□□ -2.38
RNU6-239P-201ENST00000390990 P0C880 135 aa0.18□□□□□ -2.38
RNU6-239P-201ENST00000390990 RNH1P13489 461 aaKnown RBP0.18□□□□□ -2.38
RNU6-239P-201ENST00000390990 MUC1P15941 1255 aaPredicted RBP0.18□□□□□ -2.38
RNU6-239P-201ENST00000390990 PTBP1P26599 531 aaKnown RBP eCLIP0.18□□□□□ -2.38
RNU6-239P-201ENST00000390990 EEF1DP29692 281 aaKnown RBP0.18□□□□□ -2.38
RNU6-239P-201ENST00000390990 RAB28P51157 221 aa0.18□□□□□ -2.38
RNU6-239P-201ENST00000390990 VCPP55072 806 aaKnown RBP0.18□□□□□ -2.38
RNU6-239P-201ENST00000390990 GEMIN4P57678 1058 aaKnown RBP0.18□□□□□ -2.38
RNU6-239P-201ENST00000390990 ZNF85Q03923 595 aa0.18□□□□□ -2.38
RNU6-239P-201ENST00000390990 WTAPQ15007 396 aa0.18□□□□□ -2.38
RNU6-239P-201ENST00000390990 ZRSR2Q15696 482 aaKnown RBP0.18□□□□□ -2.38
RNU6-239P-201ENST00000390990 CD226Q15762 336 aa0.18□□□□□ -2.38
RNU6-239P-201ENST00000390990 IGFBP7Q16270 282 aa0.18□□□□□ -2.38
RNU6-239P-201ENST00000390990 PRSS8Q16651 343 aa0.18□□□□□ -2.38
RNU6-239P-201ENST00000390990 LY6G6FQ5SQ64 297 aa0.18□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms