RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 OR52R1Q8NGF1 315 aa12.94□□□□□ -0.34
SHOX-202ENST00000381575 OMA1Q96E52 524 aa12.94□□□□□ -0.34
SHOX-202ENST00000381575 TSPYL1Q9H0U9 437 aa12.94□□□□□ -0.34
SHOX-202ENST00000381575 TRPS1Q9UHF7 1281 aa12.94□□□□□ -0.34
SHOX-202ENST00000381575 MAPRE3Q9UPY8 281 aa12.94□□□□□ -0.34
SHOX-202ENST00000381575 NIPBLQ6KC79 2804 aaeCLIP12.93□□□□□ -0.34
SHOX-202ENST00000381575 VPS13CQ709C8 3753 aa12.93□□□□□ -0.34
SHOX-202ENST00000381575 DLX3O60479 287 aa12.93□□□□□ -0.34
SHOX-202ENST00000381575 ATP1B1P05026 303 aa12.93□□□□□ -0.34
SHOX-202ENST00000381575 HPNP05981 417 aa12.93□□□□□ -0.34
SHOX-202ENST00000381575 IL3P08700 152 aa12.93□□□□□ -0.34
SHOX-202ENST00000381575 CSNK2A2P19784 350 aaPredicted RBP12.93□□□□□ -0.34
SHOX-202ENST00000381575 AGFG1P52594 562 aaKnown RBP12.93□□□□□ -0.34
SHOX-202ENST00000381575 PLCXD2Q0VAA5 305 aa12.93□□□□□ -0.34
SHOX-202ENST00000381575 ZNF678Q5SXM1 525 aa12.93□□□□□ -0.34
SHOX-202ENST00000381575 C10orf62Q5T681 223 aaPredicted RBP12.93□□□□□ -0.34
SHOX-202ENST00000381575 CES4AQ5XG92 561 aa12.93□□□□□ -0.34
SHOX-202ENST00000381575 PLXDC2Q6UX71 529 aa12.93□□□□□ -0.34
SHOX-202ENST00000381575 FAM83FQ8NEG4 500 aaPredicted RBP12.93□□□□□ -0.34
SHOX-202ENST00000381575 MNS1Q8NEH6 495 aa12.93□□□□□ -0.34
SHOX-202ENST00000381575 RDH11Q8TC12 318 aa12.93□□□□□ -0.34
SHOX-202ENST00000381575 KAT2AQ92830 837 aa12.93□□□□□ -0.34
SHOX-202ENST00000381575 HGDQ93099 445 aa12.93□□□□□ -0.34
SHOX-202ENST00000381575 EXOSC8Q96B26 276 aaKnown RBP12.93□□□□□ -0.34
SHOX-202ENST00000381575 KCNA7Q96RP8 456 aa12.93□□□□□ -0.34
SHOX-202ENST00000381575 TRIB1Q96RU8 372 aa12.93□□□□□ -0.34
SHOX-202ENST00000381575 GPATCH1Q9BRR8 931 aaKnown RBP12.93□□□□□ -0.34
SHOX-202ENST00000381575 C1QTNF3Q9BXJ4 246 aa12.93□□□□□ -0.34
SHOX-202ENST00000381575 EBPLQ9BY08 206 aa12.93□□□□□ -0.34
SHOX-202ENST00000381575 UGT2B28Q9BY64 529 aa12.93□□□□□ -0.34
SHOX-202ENST00000381575 BRF2Q9HAW0 419 aa12.93□□□□□ -0.34
SHOX-202ENST00000381575 SERHLQ9NQF3 203 aa12.93□□□□□ -0.34
SHOX-202ENST00000381575 VPS29Q9UBQ0 182 aa12.93□□□□□ -0.34
SHOX-202ENST00000381575 ZNF639Q9UID6 485 aa12.93□□□□□ -0.34
SHOX-202ENST00000381575 UTS2RQ9UKP6 389 aa12.93□□□□□ -0.34
SHOX-202ENST00000381575 NAV3Q8IVL0 2385 aa12.92□□□□□ -0.34
SHOX-202ENST00000381575 HSPB2A8KAH6 182 aa12.92□□□□□ -0.34
SHOX-202ENST00000381575 UGT2B11O75310 529 aa12.92□□□□□ -0.34
SHOX-202ENST00000381575 GUCY1B2O75343 617 aa12.92□□□□□ -0.34
SHOX-202ENST00000381575 SNX4O95219 450 aa12.92□□□□□ -0.34
SHOX-202ENST00000381575 BMP7P18075 431 aa12.92□□□□□ -0.34
SHOX-202ENST00000381575 TCEA1P23193 301 aaKnown RBP12.92□□□□□ -0.34
SHOX-202ENST00000381575 PTPN6P29350 595 aa12.92□□□□□ -0.34
SHOX-202ENST00000381575 PTGDSP41222 190 aa12.92□□□□□ -0.34
SHOX-202ENST00000381575 ZNF136P52737 540 aa12.92□□□□□ -0.34
SHOX-202ENST00000381575 ART1P52961 327 aa12.92□□□□□ -0.34
SHOX-202ENST00000381575 NAGLUP54802 743 aa12.92□□□□□ -0.34
SHOX-202ENST00000381575 RAE1P78406 368 aaKnown RBP12.92□□□□□ -0.34
SHOX-202ENST00000381575 HMGCS1Q01581 520 aa12.92□□□□□ -0.34
SHOX-202ENST00000381575 BTKQ06187 659 aa12.92□□□□□ -0.34
SHOX-202ENST00000381575 MAP4K2Q12851 820 aa12.92□□□□□ -0.34
SHOX-202ENST00000381575 HSPB2Q16082 182 aa12.92□□□□□ -0.34
SHOX-202ENST00000381575 TIGD3Q6B0B8 471 aa12.92□□□□□ -0.34
SHOX-202ENST00000381575 GPRIN3Q6ZVF9 776 aa12.92□□□□□ -0.34
SHOX-202ENST00000381575 CCDC116Q8IYX3 515 aa12.92□□□□□ -0.34
SHOX-202ENST00000381575 MYRIPQ8NFW9 859 aa12.92□□□□□ -0.34
SHOX-202ENST00000381575 OR1J4Q8NGS1 313 aa12.92□□□□□ -0.34
SHOX-202ENST00000381575 APIPQ96GX9 242 aa12.92□□□□□ -0.34
SHOX-202ENST00000381575 TMEM41AQ96HV5 264 aa12.92□□□□□ -0.34
SHOX-202ENST00000381575 LCORQ96JN0 433 aaPredicted RBP12.92□□□□□ -0.34
SHOX-202ENST00000381575 ZNF681Q96N22 645 aa12.92□□□□□ -0.34
SHOX-202ENST00000381575 SECISBP2Q96T21 854 aaKnown RBP12.92□□□□□ -0.34
SHOX-202ENST00000381575 FAIM2Q9BWQ8 316 aa12.92□□□□□ -0.34
SHOX-202ENST00000381575 OSBPL11Q9BXB4 747 aa12.92□□□□□ -0.34
SHOX-202ENST00000381575 ACPTQ9BZG2 426 aa12.92□□□□□ -0.34
SHOX-202ENST00000381575 LIME1Q9H400 295 aa12.92□□□□□ -0.34
SHOX-202ENST00000381575 DNAJB12Q9NXW2 375 aaKnown RBP12.92□□□□□ -0.34
SHOX-202ENST00000381575 KLRF1Q9NZS2 232 aa12.92□□□□□ -0.34
SHOX-202ENST00000381575 CRIM1Q9NZV1 1036 aa12.92□□□□□ -0.34
SHOX-202ENST00000381575 DLGAP4Q9Y2H0 992 aa12.92□□□□□ -0.34
SHOX-202ENST00000381575 TIMM22Q9Y584 194 aa12.92□□□□□ -0.34
SHOX-202ENST00000381575 GNG14A0A1W2PPG7 69 aa12.91□□□□□ -0.34
SHOX-202ENST00000381575 C17orf51A8MQB3 221 aa12.91□□□□□ -0.34
SHOX-202ENST00000381575 FAM47E-STBD1D6RA91 191 aa12.91□□□□□ -0.34
SHOX-202ENST00000381575 PCDH7O60245 1069 aa12.91□□□□□ -0.34
SHOX-202ENST00000381575 ICOSLGO75144 302 aa12.91□□□□□ -0.34
SHOX-202ENST00000381575 EPPINO95925 133 aa12.91□□□□□ -0.34
SHOX-202ENST00000381575 KRT6AP02538 564 aa12.91□□□□□ -0.34
SHOX-202ENST00000381575 KRT6BP04259 564 aa12.91□□□□□ -0.34
SHOX-202ENST00000381575 FAM153BP0C7A2 387 aa12.91□□□□□ -0.34
SHOX-202ENST00000381575 TAC1P20366 129 aa12.91□□□□□ -0.34
SHOX-202ENST00000381575 HMOX2P30519 316 aa12.91□□□□□ -0.34
SHOX-202ENST00000381575 DNAJA1P31689 397 aaKnown RBP12.91□□□□□ -0.34
SHOX-202ENST00000381575 KRT6CP48668 564 aa12.91□□□□□ -0.34
SHOX-202ENST00000381575 EMDP50402 254 aa12.91□□□□□ -0.34
SHOX-202ENST00000381575 CORO7P57737 925 aa12.91□□□□□ -0.34
SHOX-202ENST00000381575 RPP38P78345 283 aaKnown RBP12.91□□□□□ -0.34
SHOX-202ENST00000381575 RASA2Q15283 850 aa12.91□□□□□ -0.34
SHOX-202ENST00000381575 FAM153CQ494X1 144 aa12.91□□□□□ -0.34
SHOX-202ENST00000381575 VASNQ6EMK4 673 aa12.91□□□□□ -0.34
SHOX-202ENST00000381575 LACC1Q8IV20 430 aa12.91□□□□□ -0.34
SHOX-202ENST00000381575 GSPT2Q8IYD1 628 aaKnown RBP12.91□□□□□ -0.34
SHOX-202ENST00000381575 C17orf47Q8NEP4 570 aa12.91□□□□□ -0.34
SHOX-202ENST00000381575 OR9A2Q8NGT5 310 aa12.91□□□□□ -0.34
SHOX-202ENST00000381575 CDC26Q8NHZ8 85 aa12.91□□□□□ -0.34
SHOX-202ENST00000381575 METTL6Q8TCB7 284 aa12.91□□□□□ -0.34
SHOX-202ENST00000381575 ABTB1Q969K4 478 aaPredicted RBP12.91□□□□□ -0.34
SHOX-202ENST00000381575 TMBIM1Q969X1 311 aa12.91□□□□□ -0.34
SHOX-202ENST00000381575 CTHRC1Q96CG8 243 aa12.91□□□□□ -0.34
SHOX-202ENST00000381575 NTNG2Q96CW9 530 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms