RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 CD1EP15812 388 aa11.89□□□□□ -0.51
RPAIN-202ENST00000381208 S1PR1P21453 382 aa11.89□□□□□ -0.51
RPAIN-202ENST00000381208 GPX3P22352 226 aa11.89□□□□□ -0.51
RPAIN-202ENST00000381208 ECHS1P30084 290 aa11.89□□□□□ -0.51
RPAIN-202ENST00000381208 ADH7P40394 386 aa11.89□□□□□ -0.51
RPAIN-202ENST00000381208 CDH13P55290 713 aa11.89□□□□□ -0.51
RPAIN-202ENST00000381208 KRTAP10-9P60411 292 aa11.89□□□□□ -0.51
RPAIN-202ENST00000381208 CRYZQ08257 329 aaKnown RBP11.89□□□□□ -0.51
RPAIN-202ENST00000381208 HEPACAMQ14CZ8 416 aa11.89□□□□□ -0.51
RPAIN-202ENST00000381208 SPIN4Q56A73 249 aa11.89□□□□□ -0.51
RPAIN-202ENST00000381208 TIGD3Q6B0B8 471 aa11.89□□□□□ -0.51
RPAIN-202ENST00000381208 SCIMPQ6UWF3 145 aa11.89□□□□□ -0.51
RPAIN-202ENST00000381208 WDR53Q7Z5U6 358 aaPredicted RBP11.89□□□□□ -0.51
RPAIN-202ENST00000381208 IFT20Q8IY31 132 aa11.89□□□□□ -0.51
RPAIN-202ENST00000381208 ZNF675Q8TD23 568 aa11.89□□□□□ -0.51
RPAIN-202ENST00000381208 ACMSDQ8TDX5 336 aa11.89□□□□□ -0.51
RPAIN-202ENST00000381208 UCN3Q969E3 161 aa11.89□□□□□ -0.51
RPAIN-202ENST00000381208 CTHRC1Q96CG8 243 aa11.89□□□□□ -0.51
RPAIN-202ENST00000381208 KLHL29Q96CT2 875 aa11.89□□□□□ -0.51
RPAIN-202ENST00000381208 PRDM14Q9GZV8 571 aa11.89□□□□□ -0.51
RPAIN-202ENST00000381208 NXF5Q9H1B4 397 aaKnown RBP11.89□□□□□ -0.51
RPAIN-202ENST00000381208 GIMAP4Q9NUV9 329 aa11.89□□□□□ -0.51
RPAIN-202ENST00000381208 MAT2BQ9NZL9 334 aa11.89□□□□□ -0.51
RPAIN-202ENST00000381208 BCAP29Q9UHQ4 241 aa11.89□□□□□ -0.51
RPAIN-202ENST00000381208 ZNF639Q9UID6 485 aa11.89□□□□□ -0.51
RPAIN-202ENST00000381208 HCFC1P51610 2035 aa11.88□□□□□ -0.51
RPAIN-202ENST00000381208 CD8B2A6NJW9 211 aa11.88□□□□□ -0.51
RPAIN-202ENST00000381208 H3BQF6 201 aa11.88□□□□□ -0.51
RPAIN-202ENST00000381208 TO15178 435 aa11.88□□□□□ -0.51
RPAIN-202ENST00000381208 ESRRBO95718 433 aa11.88□□□□□ -0.51
RPAIN-202ENST00000381208 ACTL6AO96019 429 aa11.88□□□□□ -0.51
RPAIN-202ENST00000381208 GSTA1P08263 222 aa11.88□□□□□ -0.51
RPAIN-202ENST00000381208 DRD5P21918 477 aa11.88□□□□□ -0.51
RPAIN-202ENST00000381208 ATP5F1P24539 256 aaPredicted RBP11.88□□□□□ -0.51
RPAIN-202ENST00000381208 HMOX2P30519 316 aa11.88□□□□□ -0.51
RPAIN-202ENST00000381208 CEACAM8P31997 349 aaPredicted RBP11.88□□□□□ -0.51
RPAIN-202ENST00000381208 FEN1P39748 380 aaKnown RBP11.88□□□□□ -0.51
RPAIN-202ENST00000381208 PPICP45877 212 aa11.88□□□□□ -0.51
RPAIN-202ENST00000381208 TRPC1P48995 793 aa11.88□□□□□ -0.51
RPAIN-202ENST00000381208 PKNOX1P55347 436 aa11.88□□□□□ -0.51
RPAIN-202ENST00000381208 RIPPLY3P57055 190 aa11.88□□□□□ -0.51
RPAIN-202ENST00000381208 PLCXD2Q0VAA5 305 aa11.88□□□□□ -0.51
RPAIN-202ENST00000381208 TESK1Q15569 626 aa11.88□□□□□ -0.51
RPAIN-202ENST00000381208 FBXL19-AS1Q494R0 122 aa11.88□□□□□ -0.51
RPAIN-202ENST00000381208 ACSF3Q4G176 576 aaPredicted RBP11.88□□□□□ -0.51
RPAIN-202ENST00000381208 ZNF678Q5SXM1 525 aa11.88□□□□□ -0.51
RPAIN-202ENST00000381208 TEX35Q5T0J7 233 aa11.88□□□□□ -0.51
RPAIN-202ENST00000381208 VASNQ6EMK4 673 aa11.88□□□□□ -0.51
RPAIN-202ENST00000381208 ARSKQ6UWY0 536 aa11.88□□□□□ -0.51
RPAIN-202ENST00000381208 TMEM64Q6YI46 380 aa11.88□□□□□ -0.51
RPAIN-202ENST00000381208 GPRIN3Q6ZVF9 776 aa11.88□□□□□ -0.51
RPAIN-202ENST00000381208 TMEM200AQ86VY9 491 aa11.88□□□□□ -0.51
RPAIN-202ENST00000381208 TMEM151AQ8N4L1 468 aa11.88□□□□□ -0.51
RPAIN-202ENST00000381208 C1orf52Q8N6N3 182 aaKnown RBP11.88□□□□□ -0.51
RPAIN-202ENST00000381208 CEP112Q8N8E3 955 aa11.88□□□□□ -0.51
RPAIN-202ENST00000381208 OR1J4Q8NGS1 313 aa11.88□□□□□ -0.51
RPAIN-202ENST00000381208 METTL6Q8TCB7 284 aa11.88□□□□□ -0.51
RPAIN-202ENST00000381208 NTNG2Q96CW9 530 aa11.88□□□□□ -0.51
RPAIN-202ENST00000381208 TMCO6Q96DC7 493 aa11.88□□□□□ -0.51
RPAIN-202ENST00000381208 CCDC126Q96EE4 140 aa11.88□□□□□ -0.51
RPAIN-202ENST00000381208 TIMP4Q99727 224 aa11.88□□□□□ -0.51
RPAIN-202ENST00000381208 FARSBQ9NSD9 589 aaKnown RBP11.88□□□□□ -0.51
RPAIN-202ENST00000381208 UTS2RQ9UKP6 389 aa11.88□□□□□ -0.51
RPAIN-202ENST00000381208 L3MBTL1Q9Y468 752 aa11.88□□□□□ -0.51
RPAIN-202ENST00000381208 C2CD3Q4AC94 2353 aa11.88□□□□□ -0.51
RPAIN-202ENST00000381208 A0A1W2PS29 197 aa11.87□□□□□ -0.51
RPAIN-202ENST00000381208 MANBAO00462 879 aa11.87□□□□□ -0.51
RPAIN-202ENST00000381208 CBR3O75828 277 aa11.87□□□□□ -0.51
RPAIN-202ENST00000381208 OR4F21O95013 312 aa11.87□□□□□ -0.51
RPAIN-202ENST00000381208 ENO1P06733 434 aaKnown RBP11.87□□□□□ -0.51
RPAIN-202ENST00000381208 SBK3P0C264 359 aa11.87□□□□□ -0.51
RPAIN-202ENST00000381208 IMPDH1P20839 514 aa11.87□□□□□ -0.51
RPAIN-202ENST00000381208 KIR2DL3P43628 341 aa11.87□□□□□ -0.51
RPAIN-202ENST00000381208 ALDH9A1P49189 494 aa11.87□□□□□ -0.51
RPAIN-202ENST00000381208 ASCL1P50553 236 aa11.87□□□□□ -0.51
RPAIN-202ENST00000381208 MRPS22P82650 360 aaKnown RBP11.87□□□□□ -0.51
RPAIN-202ENST00000381208 ACSM2AQ08AH3 577 aa11.87□□□□□ -0.51
RPAIN-202ENST00000381208 MGAT2Q10469 447 aa11.87□□□□□ -0.51
RPAIN-202ENST00000381208 RCAN2Q14206 197 aa11.87□□□□□ -0.51
RPAIN-202ENST00000381208 TOMM20Q15388 145 aa11.87□□□□□ -0.51
RPAIN-202ENST00000381208 UBAP2Q5T6F2 1119 aaKnown RBP11.87□□□□□ -0.51
RPAIN-202ENST00000381208 NSUN5P2Q63ZY6 315 aa11.87□□□□□ -0.51
RPAIN-202ENST00000381208 ACSM2BQ68CK6 577 aa11.87□□□□□ -0.51
RPAIN-202ENST00000381208 LIX1LQ8IVB5 337 aa11.87□□□□□ -0.51
RPAIN-202ENST00000381208 CDYL2Q8N8U2 506 aa11.87□□□□□ -0.51
RPAIN-202ENST00000381208 UHMK1Q8TAS1 419 aaKnown RBP11.87□□□□□ -0.51
RPAIN-202ENST00000381208 NINJ1Q92982 152 aa11.87□□□□□ -0.51
RPAIN-202ENST00000381208 RNASE6Q93091 150 aaKnown RBP11.87□□□□□ -0.51
RPAIN-202ENST00000381208 ABTB1Q969K4 478 aaPredicted RBP11.87□□□□□ -0.51
RPAIN-202ENST00000381208 OMA1Q96E52 524 aa11.87□□□□□ -0.51
RPAIN-202ENST00000381208 ZNF681Q96N22 645 aa11.87□□□□□ -0.51
RPAIN-202ENST00000381208 GNRHR2Q96P88 292 aa11.87□□□□□ -0.51
RPAIN-202ENST00000381208 OSBPL11Q9BXB4 747 aa11.87□□□□□ -0.51
RPAIN-202ENST00000381208 ITPAQ9BY32 194 aa11.87□□□□□ -0.51
RPAIN-202ENST00000381208 STMN4Q9H169 189 aaPredicted RBP11.87□□□□□ -0.51
RPAIN-202ENST00000381208 PFDN4Q9NQP4 134 aa11.87□□□□□ -0.51
RPAIN-202ENST00000381208 EHD3Q9NZN3 535 aa11.87□□□□□ -0.51
RPAIN-202ENST00000381208 ZNF225Q9UK10 706 aa11.87□□□□□ -0.51
RPAIN-202ENST00000381208 WBP11Q9Y2W2 641 aaKnown RBP11.87□□□□□ -0.51
RPAIN-202ENST00000381208 SERTM1A2A2V5 107 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms