RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 FOXD4Q12950 439 aaPredicted RBP13.45□□□□□ -0.26
CLCN4-201ENST00000380829 GPR18Q14330 331 aa13.45□□□□□ -0.26
CLCN4-201ENST00000380829 CCDC85BQ15834 202 aaPredicted RBP13.45□□□□□ -0.26
CLCN4-201ENST00000380829 RFX4Q33E94 735 aa13.45□□□□□ -0.26
CLCN4-201ENST00000380829 TBRG1Q3YBR2 411 aa13.45□□□□□ -0.26
CLCN4-201ENST00000380829 IFI44LQ53G44 452 aa13.45□□□□□ -0.26
CLCN4-201ENST00000380829 CRB2Q5IJ48 1285 aa13.45□□□□□ -0.26
CLCN4-201ENST00000380829 C18orf63Q68DL7 685 aa13.45□□□□□ -0.26
CLCN4-201ENST00000380829 ZNF438Q7Z4V0 828 aa13.45□□□□□ -0.26
CLCN4-201ENST00000380829 PAQR7Q86WK9 346 aa13.45□□□□□ -0.26
CLCN4-201ENST00000380829 UBQLNLQ8IYU4 475 aa13.45□□□□□ -0.26
CLCN4-201ENST00000380829 LSMEM1Q8N8F7 131 aa13.45□□□□□ -0.26
CLCN4-201ENST00000380829 OR52J3Q8NH60 311 aa13.45□□□□□ -0.26
CLCN4-201ENST00000380829 ANGPTL6Q8NI99 470 aa13.45□□□□□ -0.26
CLCN4-201ENST00000380829 SLC38A5Q8WUX1 472 aa13.45□□□□□ -0.26
CLCN4-201ENST00000380829 SARGQ9BW04 601 aa13.45□□□□□ -0.26
CLCN4-201ENST00000380829 SLC35C2Q9NQQ7 365 aa13.45□□□□□ -0.26
CLCN4-201ENST00000380829 ASB4Q9Y574 426 aa13.45□□□□□ -0.26
CLCN4-201ENST00000380829 A0A1W2PS29 197 aa13.44□□□□□ -0.26
CLCN4-201ENST00000380829 GSAPA4D1B5 854 aa13.44□□□□□ -0.26
CLCN4-201ENST00000380829 C12orf71A8MTZ7 269 aa13.44□□□□□ -0.26
CLCN4-201ENST00000380829 J3KTA2 159 aa13.44□□□□□ -0.26
CLCN4-201ENST00000380829 MAN2B1O00754 1011 aa13.44□□□□□ -0.26
CLCN4-201ENST00000380829 ARHGAP33O14559 1287 aa13.44□□□□□ -0.26
CLCN4-201ENST00000380829 C9P02748 559 aa13.44□□□□□ -0.26
CLCN4-201ENST00000380829 CELA2BP08218 269 aaPredicted RBP13.44□□□□□ -0.26
CLCN4-201ENST00000380829 C8orf89P0DMQ9 161 aa13.44□□□□□ -0.26
CLCN4-201ENST00000380829 DRD2P14416 443 aa13.44□□□□□ -0.26
CLCN4-201ENST00000380829 EPHA2P29317 976 aa13.44□□□□□ -0.26
CLCN4-201ENST00000380829 GSTM5P46439 218 aa13.44□□□□□ -0.26
CLCN4-201ENST00000380829 NCBP2P52298 156 aaKnown RBP eCLIP13.44□□□□□ -0.26
CLCN4-201ENST00000380829 ILF3Q12906 894 aaKnown RBP eCLIP13.44□□□□□ -0.26
CLCN4-201ENST00000380829 SOWAHCQ53LP3 525 aaPredicted RBP13.44□□□□□ -0.26
CLCN4-201ENST00000380829 SYT6Q5T7P8 510 aaPredicted RBP13.44□□□□□ -0.26
CLCN4-201ENST00000380829 VN1R4Q7Z5H5 301 aa13.44□□□□□ -0.26
CLCN4-201ENST00000380829 TRIM48Q8IWZ4 208 aa13.44□□□□□ -0.26
CLCN4-201ENST00000380829 OTUB1Q96FW1 271 aaPredicted RBP13.44□□□□□ -0.26
CLCN4-201ENST00000380829 AMDHD1Q96NU7 426 aa13.44□□□□□ -0.26
CLCN4-201ENST00000380829 FAIM2Q9BWQ8 316 aa13.44□□□□□ -0.26
CLCN4-201ENST00000380829 B3GNT4Q9C0J1 378 aa13.44□□□□□ -0.26
CLCN4-201ENST00000380829 SERHL2Q9H4I8 314 aa13.44□□□□□ -0.26
CLCN4-201ENST00000380829 FBXO9Q9UK97 447 aaPredicted RBP13.44□□□□□ -0.26
CLCN4-201ENST00000380829 PCDHGB1Q9Y5G3 927 aa13.44□□□□□ -0.26
CLCN4-201ENST00000380829 VCANP13611 3396 aa13.44□□□□□ -0.26
CLCN4-201ENST00000380829 AIFM1O95831 613 aa13.44□□□□□ -0.26
CLCN4-201ENST00000380829 IFI30P13284 250 aa13.44□□□□□ -0.26
CLCN4-201ENST00000380829 REEP3Q6NUK4 255 aa13.44□□□□□ -0.26
CLCN4-201ENST00000380829 GLRX5Q86SX6 157 aa13.44□□□□□ -0.26
CLCN4-201ENST00000380829 FLVCR1-AS1Q8TAF5 88 aa13.44□□□□□ -0.26
CLCN4-201ENST00000380829 RLN3Q8WXF3 142 aa13.44□□□□□ -0.26
CLCN4-201ENST00000380829 TMEM19Q96HH6 336 aa13.44□□□□□ -0.26
CLCN4-201ENST00000380829 FYTTD1Q96QD9 318 aaKnown RBP13.44□□□□□ -0.26
CLCN4-201ENST00000380829 BBS4Q96RK4 519 aa13.44□□□□□ -0.26
CLCN4-201ENST00000380829 GPR174Q9BXC1 333 aa13.44□□□□□ -0.26
CLCN4-201ENST00000380829 PRRG3Q9BZD7 231 aa13.44□□□□□ -0.26
CLCN4-201ENST00000380829 POLMQ9NP87 494 aaPredicted RBP13.44□□□□□ -0.26
CLCN4-201ENST00000380829 ACOT13Q9NPJ3 140 aa13.44□□□□□ -0.26
CLCN4-201ENST00000380829 KRT84Q9NSB2 600 aa13.44□□□□□ -0.26
CLCN4-201ENST00000380829 ACSS1Q9NUB1 689 aaPredicted RBP13.44□□□□□ -0.26
CLCN4-201ENST00000380829 TAS2R7Q9NYW3 318 aa13.44□□□□□ -0.26
CLCN4-201ENST00000380829 STMN3Q9NZ72 180 aa13.44□□□□□ -0.26
CLCN4-201ENST00000380829 HS3ST3A1Q9Y663 406 aa13.44□□□□□ -0.26
CLCN4-201ENST00000380829 SLCO1B1Q9Y6L6 691 aa13.44□□□□□ -0.26
CLCN4-201ENST00000380829 MN1Q10571 1320 aaPredicted RBP13.44□□□□□ -0.26
CLCN4-201ENST00000380829 OR6C74A6NCV1 312 aa13.43□□□□□ -0.26
CLCN4-201ENST00000380829 C5orf58C9J3I9 102 aa13.43□□□□□ -0.26
CLCN4-201ENST00000380829 HMGN4O00479 90 aa13.43□□□□□ -0.26
CLCN4-201ENST00000380829 SLC16A6O15403 523 aa13.43□□□□□ -0.26
CLCN4-201ENST00000380829 CCDC159P0C7I6 412 aa13.43□□□□□ -0.26
CLCN4-201ENST00000380829 GLULP15104 373 aa13.43□□□□□ -0.26
CLCN4-201ENST00000380829 CDH12P55289 794 aa13.43□□□□□ -0.26
CLCN4-201ENST00000380829 TUBA1BP68363 451 aa13.43□□□□□ -0.26
CLCN4-201ENST00000380829 SLC35A2P78381 396 aa13.43□□□□□ -0.26
CLCN4-201ENST00000380829 BTN3A2P78410 334 aa13.43□□□□□ -0.26
CLCN4-201ENST00000380829 SPIBQ01892 262 aa13.43□□□□□ -0.26
CLCN4-201ENST00000380829 DUSP2Q05923 314 aa13.43□□□□□ -0.26
CLCN4-201ENST00000380829 C19orf57Q0VDD7 668 aa13.43□□□□□ -0.26
CLCN4-201ENST00000380829 DUSP7Q16829 419 aa13.43□□□□□ -0.26
CLCN4-201ENST00000380829 ZC3H12BQ5HYM0 836 aaKnown RBP13.43□□□□□ -0.26
CLCN4-201ENST00000380829 MRM1Q6IN84 353 aaKnown RBP13.43□□□□□ -0.26
CLCN4-201ENST00000380829 TUBA1AQ71U36 451 aa13.43□□□□□ -0.26
CLCN4-201ENST00000380829 NRARPQ7Z6K4 114 aa13.43□□□□□ -0.26
CLCN4-201ENST00000380829 ABI3BPQ7Z7G0 1075 aa13.43□□□□□ -0.26
CLCN4-201ENST00000380829 FAM160A2Q8N612 972 aaPredicted RBP13.43□□□□□ -0.26
CLCN4-201ENST00000380829 ESX1Q8N693 406 aa13.43□□□□□ -0.26
CLCN4-201ENST00000380829 OR5D16Q8NGK9 328 aa13.43□□□□□ -0.26
CLCN4-201ENST00000380829 ZNF764Q96H86 408 aaPredicted RBP13.43□□□□□ -0.26
CLCN4-201ENST00000380829 OR2A14Q96R47 310 aa13.43□□□□□ -0.26
CLCN4-201ENST00000380829 EPYCQ99645 322 aa13.43□□□□□ -0.26
CLCN4-201ENST00000380829 MMP27Q9H306 513 aa13.43□□□□□ -0.26
CLCN4-201ENST00000380829 NARFLQ9H6Q4 476 aa13.43□□□□□ -0.26
CLCN4-201ENST00000380829 ERVK13-1Q9NX77 482 aa13.43□□□□□ -0.26
CLCN4-201ENST00000380829 EHD3Q9NZN3 535 aa13.43□□□□□ -0.26
CLCN4-201ENST00000380829 PCDHGB6Q9Y5F9 930 aa13.43□□□□□ -0.26
CLCN4-201ENST00000380829 PCDHGB3Q9Y5G1 929 aa13.43□□□□□ -0.26
CLCN4-201ENST00000380829 LYVE1Q9Y5Y7 322 aa13.43□□□□□ -0.26
CLCN4-201ENST00000380829 KNL1Q8NG31 2342 aa13.43□□□□□ -0.26
CLCN4-201ENST00000380829 PRAMEF26H0Y7S4 382 aa13.43□□□□□ -0.26
CLCN4-201ENST00000380829 TNFRSF11BO00300 401 aa13.43□□□□□ -0.26
CLCN4-201ENST00000380829 DSCR3O14972 297 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms