RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 B3GNT9Q6UX72 402 aa15.26■□□□□ 0.03
COL2A1-202ENST00000380518 TTLL10Q6ZVT0 673 aa15.26■□□□□ 0.03
COL2A1-202ENST00000380518 OR5L2Q8NGL0 311 aa15.26■□□□□ 0.03
COL2A1-202ENST00000380518 OR13J1Q8NGT2 312 aa15.26■□□□□ 0.03
COL2A1-202ENST00000380518 C17orf50Q8WW18 174 aa15.26■□□□□ 0.03
COL2A1-202ENST00000380518 OR4K3Q96R72 315 aa15.26■□□□□ 0.03
COL2A1-202ENST00000380518 ACTRT3Q9BYD9 372 aa15.26■□□□□ 0.03
COL2A1-202ENST00000380518 SLC17A9Q9BYT1 436 aa15.26■□□□□ 0.03
COL2A1-202ENST00000380518 ZNF701Q9NV72 531 aaPredicted RBP15.26■□□□□ 0.03
COL2A1-202ENST00000380518 NUFIP1Q9UHK0 495 aaKnown RBP15.26■□□□□ 0.03
COL2A1-202ENST00000380518 AKAP12Q02952 1782 aa15.26■□□□□ 0.03
COL2A1-202ENST00000380518 COL2A1P02458 1487 aaPredicted RBP15.26■□□□□ 0.03
COL2A1-202ENST00000380518 MYADML2A6NDP7 307 aa15.26■□□□□ 0.03
COL2A1-202ENST00000380518 PHYHO14832 338 aa15.26■□□□□ 0.03
COL2A1-202ENST00000380518 NARSO43776 548 aaKnown RBP15.26■□□□□ 0.03
COL2A1-202ENST00000380518 NCS1P62166 190 aa15.26■□□□□ 0.03
COL2A1-202ENST00000380518 MRPL49Q13405 166 aaKnown RBP15.26■□□□□ 0.03
COL2A1-202ENST00000380518 LDLRAD1Q5T700 205 aa15.26■□□□□ 0.03
COL2A1-202ENST00000380518 IER5LQ5T953 404 aa15.26■□□□□ 0.03
COL2A1-202ENST00000380518 FIGLAQ6QHK4 219 aa15.26■□□□□ 0.03
COL2A1-202ENST00000380518 ZFP41Q8N8Y5 198 aa15.26■□□□□ 0.03
COL2A1-202ENST00000380518 OR52E2Q8NGJ4 325 aa15.26■□□□□ 0.03
COL2A1-202ENST00000380518 MSLNLQ96KJ4 702 aa15.26■□□□□ 0.03
COL2A1-202ENST00000380518 FOLH1BQ9HBA9 442 aa15.26■□□□□ 0.03
COL2A1-202ENST00000380518 PARPBPQ9NWS1 579 aa15.26■□□□□ 0.03
COL2A1-202ENST00000380518 KCNN3Q9UGI6 736 aa15.26■□□□□ 0.03
COL2A1-202ENST00000380518 TGM5O43548 720 aa15.26■□□□□ 0.03
COL2A1-202ENST00000380518 IL7P13232 177 aa15.26■□□□□ 0.03
COL2A1-202ENST00000380518 VEZF1Q14119 521 aa15.26■□□□□ 0.03
COL2A1-202ENST00000380518 GBX1Q14549 363 aa15.26■□□□□ 0.03
COL2A1-202ENST00000380518 PAGE3Q5JUK9 113 aa15.26■□□□□ 0.03
COL2A1-202ENST00000380518 C3orf33Q6P1S2 294 aa15.26■□□□□ 0.03
COL2A1-202ENST00000380518 WDR20Q8TBZ3 569 aa15.26■□□□□ 0.03
COL2A1-202ENST00000380518 PGAM5Q96HS1 289 aa15.26■□□□□ 0.03
COL2A1-202ENST00000380518 SLC6A7Q99884 636 aa15.26■□□□□ 0.03
COL2A1-202ENST00000380518 UBQLN2Q9UHD9 624 aa15.26■□□□□ 0.03
COL2A1-202ENST00000380518 H7C417 338 aa15.26■□□□□ 0.03
COL2A1-202ENST00000380518 IL1RNP18510 177 aa15.26■□□□□ 0.03
COL2A1-202ENST00000380518 NRMQ8IXM6 262 aa15.26■□□□□ 0.03
COL2A1-202ENST00000380518 NAGSQ8N159 534 aa15.26■□□□□ 0.03
COL2A1-202ENST00000380518 CACNG6Q9BXT2 260 aa15.26■□□□□ 0.03
COL2A1-202ENST00000380518 STRADBQ9C0K7 418 aa15.26■□□□□ 0.03
COL2A1-202ENST00000380518 BRF2Q9HAW0 419 aa15.26■□□□□ 0.03
COL2A1-202ENST00000380518 IL23AQ9NPF7 189 aa15.26■□□□□ 0.03
COL2A1-202ENST00000380518 ERVK13-1Q9NX77 482 aa15.26■□□□□ 0.03
COL2A1-202ENST00000380518 ADAMTS5Q9UNA0 930 aa15.26■□□□□ 0.03
COL2A1-202ENST00000380518 PHRF1Q9P1Y6 1649 aaKnown RBP15.26■□□□□ 0.03
COL2A1-202ENST00000380518 MBLAC1A4D2B0 266 aaPredicted RBP15.25■□□□□ 0.03
COL2A1-202ENST00000380518 M0R129 80 aa15.25■□□□□ 0.03
COL2A1-202ENST00000380518 FOXD2O60548 495 aaPredicted RBP15.25■□□□□ 0.03
COL2A1-202ENST00000380518 SFTPBP07988 381 aa15.25■□□□□ 0.03
COL2A1-202ENST00000380518 ARF3P61204 181 aaPredicted RBP15.25■□□□□ 0.03
COL2A1-202ENST00000380518 ARF1P84077 181 aaKnown RBP15.25■□□□□ 0.03
COL2A1-202ENST00000380518 UBQLNLQ8IYU4 475 aa15.25■□□□□ 0.03
COL2A1-202ENST00000380518 TTC9BQ8N6N2 239 aa15.25■□□□□ 0.03
COL2A1-202ENST00000380518 ZNF709Q8N972 641 aa15.25■□□□□ 0.03
COL2A1-202ENST00000380518 TOR1AIP2Q8NFQ8 470 aa15.25■□□□□ 0.03
COL2A1-202ENST00000380518 FRS2Q8WU20 508 aa15.25■□□□□ 0.03
COL2A1-202ENST00000380518 FAM46AQ96IP4 442 aaKnown RBP15.25■□□□□ 0.03
COL2A1-202ENST00000380518 ANKMY1Q9P2S6 941 aa15.25■□□□□ 0.03
COL2A1-202ENST00000380518 BTNL2Q9UIR0 455 aa15.25■□□□□ 0.03
COL2A1-202ENST00000380518 AGAP5A6NIR3 686 aa15.25■□□□□ 0.03
COL2A1-202ENST00000380518 CREBL2O60519 120 aaPredicted RBP15.25■□□□□ 0.03
COL2A1-202ENST00000380518 RPS17P08708 135 aaKnown RBP15.25■□□□□ 0.03
COL2A1-202ENST00000380518 GNRHRP30968 328 aa15.25■□□□□ 0.03
COL2A1-202ENST00000380518 RORAP35398 523 aa15.25■□□□□ 0.03
COL2A1-202ENST00000380518 VIPR2P41587 438 aa15.25■□□□□ 0.03
COL2A1-202ENST00000380518 GRM7Q14831 915 aa15.25■□□□□ 0.03
COL2A1-202ENST00000380518 RHEBQ15382 184 aa15.25■□□□□ 0.03
COL2A1-202ENST00000380518 TCEAL8Q8IYN2 117 aa15.25■□□□□ 0.03
COL2A1-202ENST00000380518 GALNT11Q8NCW6 608 aa15.25■□□□□ 0.03
COL2A1-202ENST00000380518 THAP3Q8WTV1 239 aaPredicted RBP15.25■□□□□ 0.03
COL2A1-202ENST00000380518 TMEM246Q9BRR3 403 aa15.25■□□□□ 0.03
COL2A1-202ENST00000380518 FBRSQ9HAH7 460 aa15.25■□□□□ 0.03
COL2A1-202ENST00000380518 SHC2P98077 582 aa15.25■□□□□ 0.03
COL2A1-202ENST00000380518 CDNFQ49AH0 187 aa15.25■□□□□ 0.03
COL2A1-202ENST00000380518 PLBD1Q6P4A8 553 aa15.25■□□□□ 0.03
COL2A1-202ENST00000380518 OR1F2PQ96R84 312 aa15.25■□□□□ 0.03
COL2A1-202ENST00000380518 TMEM121BQ9BXQ6 578 aaPredicted RBP15.25■□□□□ 0.03
COL2A1-202ENST00000380518 MGAT4CQ9UBM8 478 aa15.25■□□□□ 0.03
COL2A1-202ENST00000380518 VSTM2BA6NLU5 285 aa15.25■□□□□ 0.03
COL2A1-202ENST00000380518 URB1O60287 2271 aaKnown RBP15.25■□□□□ 0.03
COL2A1-202ENST00000380518 RAB3BP20337 219 aa15.25■□□□□ 0.03
COL2A1-202ENST00000380518 INHBCP55103 352 aa15.25■□□□□ 0.03
COL2A1-202ENST00000380518 SELENOWP63302 87 aa15.25■□□□□ 0.03
COL2A1-202ENST00000380518 GNMTQ14749 295 aa15.25■□□□□ 0.03
COL2A1-202ENST00000380518 MICAQ29983 383 aa15.25■□□□□ 0.03
COL2A1-202ENST00000380518 ZER1Q7Z7L7 766 aa15.25■□□□□ 0.03
COL2A1-202ENST00000380518 TSACCQ96A04 125 aaPredicted RBP15.25■□□□□ 0.03
COL2A1-202ENST00000380518 INPP5KQ9BT40 448 aa15.25■□□□□ 0.03
COL2A1-202ENST00000380518 SYT11Q9BT88 431 aa15.25■□□□□ 0.03
COL2A1-202ENST00000380518 HOXD1Q9GZZ0 328 aa15.25■□□□□ 0.03
COL2A1-202ENST00000380518 MTG2Q9H4K7 406 aa15.25■□□□□ 0.03
COL2A1-202ENST00000380518 GJD2Q9UKL4 321 aa15.25■□□□□ 0.03
COL2A1-202ENST00000380518 OR1A2Q9Y585 309 aa15.25■□□□□ 0.03
COL2A1-202ENST00000380518 H7C2Y5 167 aa15.24■□□□□ 0.03
COL2A1-202ENST00000380518 MRPS14O60783 128 aaKnown RBP15.24■□□□□ 0.03
COL2A1-202ENST00000380518 SLC10A3P09131 477 aa15.24■□□□□ 0.03
COL2A1-202ENST00000380518 T-ENOLP0DO92 83 aa15.24■□□□□ 0.03
COL2A1-202ENST00000380518 CFL1P23528 166 aaKnown RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms