RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 OR4K3Q96R72 315 aa8.07□□□□□ -1.12
NHLRC3-201ENST00000379599 OR52E6Q96RD3 313 aa8.07□□□□□ -1.12
NHLRC3-201ENST00000379599 C2orf88Q9BSF0 95 aa8.07□□□□□ -1.12
NHLRC3-201ENST00000379599 NT5C1AQ9BXI3 368 aa8.07□□□□□ -1.12
NHLRC3-201ENST00000379599 GPR61Q9BZJ8 451 aa8.07□□□□□ -1.12
NHLRC3-201ENST00000379599 POLR1EQ9GZS1 481 aaKnown RBP8.07□□□□□ -1.12
NHLRC3-201ENST00000379599 TLNRD1Q9H1K6 362 aa8.07□□□□□ -1.12
NHLRC3-201ENST00000379599 SLC38A1Q9H2H9 487 aa8.07□□□□□ -1.12
NHLRC3-201ENST00000379599 ATXN3LQ9H3M9 355 aa8.07□□□□□ -1.12
NHLRC3-201ENST00000379599 SUV39H2Q9H5I1 410 aa8.07□□□□□ -1.12
NHLRC3-201ENST00000379599 TDRD3Q9H7E2 651 aaKnown RBP8.07□□□□□ -1.12
NHLRC3-201ENST00000379599 PRDM5Q9NQX1 630 aaPredicted RBP8.07□□□□□ -1.12
NHLRC3-201ENST00000379599 ZMIZ1Q9ULJ6 1067 aa8.07□□□□□ -1.12
NHLRC3-201ENST00000379599 MMACHCQ9Y4U1 282 aa8.07□□□□□ -1.12
NHLRC3-201ENST00000379599 ZNF638Q14966 1978 aaKnown RBP8.07□□□□□ -1.12
NHLRC3-201ENST00000379599 SCN9AQ15858 1988 aa8.07□□□□□ -1.12
NHLRC3-201ENST00000379599 A0A0A6YYC8 382 aaPredicted RBP8.07□□□□□ -1.12
NHLRC3-201ENST00000379599 IGKV6D-41A0A0C4DH26 115 aa8.07□□□□□ -1.12
NHLRC3-201ENST00000379599 ZNF705EA8MWA4 302 aaPredicted RBP8.07□□□□□ -1.12
NHLRC3-201ENST00000379599 C5orf58C9J3I9 102 aa8.07□□□□□ -1.12
NHLRC3-201ENST00000379599 TSTD3H0UI37 97 aa8.07□□□□□ -1.12
NHLRC3-201ENST00000379599 I3L1I5 382 aaPredicted RBP8.07□□□□□ -1.12
NHLRC3-201ENST00000379599 FARS2O95363 451 aaKnown RBP8.07□□□□□ -1.12
NHLRC3-201ENST00000379599 JCHAINP01591 159 aa8.07□□□□□ -1.12
NHLRC3-201ENST00000379599 ANXA2P07355 339 aaKnown RBP8.07□□□□□ -1.12
NHLRC3-201ENST00000379599 ZNF35P13682 527 aa8.07□□□□□ -1.12
NHLRC3-201ENST00000379599 ZNF25P17030 456 aaPredicted RBP8.07□□□□□ -1.12
NHLRC3-201ENST00000379599 ITGB5P18084 799 aa8.07□□□□□ -1.12
NHLRC3-201ENST00000379599 CNR1P21554 472 aa8.07□□□□□ -1.12
NHLRC3-201ENST00000379599 TNFSF9P41273 254 aa8.07□□□□□ -1.12
NHLRC3-201ENST00000379599 HTR5AP47898 357 aa8.07□□□□□ -1.12
NHLRC3-201ENST00000379599 TGFB2P61812 414 aa8.07□□□□□ -1.12
NHLRC3-201ENST00000379599 SIM1P81133 766 aaPredicted RBP8.07□□□□□ -1.12
NHLRC3-201ENST00000379599 FAM189BP81408 668 aa8.07□□□□□ -1.12
NHLRC3-201ENST00000379599 SLC5A12Q1EHB4 618 aa8.07□□□□□ -1.12
NHLRC3-201ENST00000379599 DUOXA2Q1HG44 320 aa8.07□□□□□ -1.12
NHLRC3-201ENST00000379599 MPPE1Q53F39 396 aa8.07□□□□□ -1.12
NHLRC3-201ENST00000379599 PYY3Q5JQD4 70 aa8.07□□□□□ -1.12
NHLRC3-201ENST00000379599 IL27RAQ6UWB1 636 aa8.07□□□□□ -1.12
NHLRC3-201ENST00000379599 TAS1R3Q7RTX0 852 aa8.07□□□□□ -1.12
NHLRC3-201ENST00000379599 SLITRK4Q8IW52 837 aa8.07□□□□□ -1.12
NHLRC3-201ENST00000379599 MSRB3Q8IXL7 192 aa8.07□□□□□ -1.12
NHLRC3-201ENST00000379599 ZNF561Q8N587 486 aa8.07□□□□□ -1.12
NHLRC3-201ENST00000379599 SPPL2AQ8TCT8 520 aa8.07□□□□□ -1.12
NHLRC3-201ENST00000379599 CDK15Q96Q40 435 aa8.07□□□□□ -1.12
NHLRC3-201ENST00000379599 HAPLN2Q9GZV7 340 aa8.07□□□□□ -1.12
NHLRC3-201ENST00000379599 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.07□□□□□ -1.12
NHLRC3-201ENST00000379599 OR10A4Q9H209 315 aa8.07□□□□□ -1.12
NHLRC3-201ENST00000379599 CHRDQ9H2X0 955 aa8.07□□□□□ -1.12
NHLRC3-201ENST00000379599 EXOSC3Q9NQT5 275 aaKnown RBP8.07□□□□□ -1.12
NHLRC3-201ENST00000379599 TMPRSS4Q9NRS4 437 aa8.07□□□□□ -1.12
NHLRC3-201ENST00000379599 ASF1BQ9NVP2 202 aa8.07□□□□□ -1.12
NHLRC3-201ENST00000379599 BACE2Q9Y5Z0 518 aa8.07□□□□□ -1.12
NHLRC3-201ENST00000379599 OR8U8P0C7N1 319 aa8.06□□□□□ -1.12
NHLRC3-201ENST00000379599 TFPIP10646 304 aa8.06□□□□□ -1.12
NHLRC3-201ENST00000379599 HOXB6P17509 224 aaKnown RBP8.06□□□□□ -1.12
NHLRC3-201ENST00000379599 CCR9P51686 369 aa8.06□□□□□ -1.12
NHLRC3-201ENST00000379599 EPHA4P54764 986 aa8.06□□□□□ -1.12
NHLRC3-201ENST00000379599 MLLT11Q13015 90 aaPredicted RBP8.06□□□□□ -1.12
NHLRC3-201ENST00000379599 MFSD14BQ5SR56 506 aa8.06□□□□□ -1.12
NHLRC3-201ENST00000379599 LIPJQ5W064 366 aa8.06□□□□□ -1.12
NHLRC3-201ENST00000379599 C18orf63Q68DL7 685 aa8.06□□□□□ -1.12
NHLRC3-201ENST00000379599 CLEC2AQ6UVW9 174 aa8.06□□□□□ -1.12
NHLRC3-201ENST00000379599 TMEM207Q6UWW9 146 aa8.06□□□□□ -1.12
NHLRC3-201ENST00000379599 ARMC10Q8N2F6 343 aa8.06□□□□□ -1.12
NHLRC3-201ENST00000379599 STK40Q8N2I9 435 aa8.06□□□□□ -1.12
NHLRC3-201ENST00000379599 C3orf49Q96BT1 292 aa8.06□□□□□ -1.12
NHLRC3-201ENST00000379599 RAB3CQ96E17 227 aa8.06□□□□□ -1.12
NHLRC3-201ENST00000379599 NIPSNAP1Q9BPW8 284 aa8.06□□□□□ -1.12
NHLRC3-201ENST00000379599 FUZQ9BT04 418 aa8.06□□□□□ -1.12
NHLRC3-201ENST00000379599 DPY30Q9C005 99 aa8.06□□□□□ -1.12
NHLRC3-201ENST00000379599 NXF3Q9H4D5 531 aaKnown RBP8.06□□□□□ -1.12
NHLRC3-201ENST00000379599 DUSP22Q9NRW4 184 aa8.06□□□□□ -1.12
NHLRC3-201ENST00000379599 CA10Q9NS85 328 aa8.06□□□□□ -1.12
NHLRC3-201ENST00000379599 SLC6A13Q9NSD5 602 aa8.06□□□□□ -1.12
NHLRC3-201ENST00000379599 TMEM72A0PK05 275 aa8.06□□□□□ -1.12
NHLRC3-201ENST00000379599 RFPL4AA6NLU0 287 aa8.06□□□□□ -1.12
NHLRC3-201ENST00000379599 FAM220BPB1ANY3 271 aa8.06□□□□□ -1.12
NHLRC3-201ENST00000379599 RFPL4AL1F8VTS6 287 aa8.06□□□□□ -1.12
NHLRC3-201ENST00000379599 IL33O95760 270 aa8.06□□□□□ -1.12
NHLRC3-201ENST00000379599 EBLN1P0CF75 366 aa8.06□□□□□ -1.12
NHLRC3-201ENST00000379599 PRR35P0CG20 571 aa8.06□□□□□ -1.12
NHLRC3-201ENST00000379599 UROSP10746 265 aa8.06□□□□□ -1.12
NHLRC3-201ENST00000379599 ACHEP22303 614 aa8.06□□□□□ -1.12
NHLRC3-201ENST00000379599 CRABP1P29762 137 aa8.06□□□□□ -1.12
NHLRC3-201ENST00000379599 CNR2P34972 360 aa8.06□□□□□ -1.12
NHLRC3-201ENST00000379599 STARD6P59095 220 aa8.06□□□□□ -1.12
NHLRC3-201ENST00000379599 SP4Q02446 784 aa8.06□□□□□ -1.12
NHLRC3-201ENST00000379599 MBTPS1Q14703 1052 aa8.06□□□□□ -1.12
NHLRC3-201ENST00000379599 ZNF667Q5HYK9 610 aa8.06□□□□□ -1.12
NHLRC3-201ENST00000379599 SDHAF4Q5VUM1 108 aa8.06□□□□□ -1.12
NHLRC3-201ENST00000379599 RAB12Q6IQ22 244 aa8.06□□□□□ -1.12
NHLRC3-201ENST00000379599 NHLRC1Q6VVB1 395 aa8.06□□□□□ -1.12
NHLRC3-201ENST00000379599 C2CD4AQ8NCU7 369 aaPredicted RBP8.06□□□□□ -1.12
NHLRC3-201ENST00000379599 OR52E4Q8NGH9 312 aa8.06□□□□□ -1.12
NHLRC3-201ENST00000379599 SPATA22Q8NHS9 363 aa8.06□□□□□ -1.12
NHLRC3-201ENST00000379599 RNFT2Q96EX2 444 aa8.06□□□□□ -1.12
NHLRC3-201ENST00000379599 ZNF599Q96NL3 588 aa8.06□□□□□ -1.12
NHLRC3-201ENST00000379599 TSPAN10Q9H1Z9 355 aaPredicted RBP8.06□□□□□ -1.12
NHLRC3-201ENST00000379599 PIGMQ9H3S5 423 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms