RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 KRT34O76011 436 aa12.75□□□□□ -0.37
PRPF18-202ENST00000378572 SMIM10L1P0DMW3 83 aa12.75□□□□□ -0.37
PRPF18-202ENST00000378572 AGAP20933 346 aa12.75□□□□□ -0.37
PRPF18-202ENST00000378572 IL12AP29459 219 aa12.75□□□□□ -0.37
PRPF18-202ENST00000378572 CLCN2P51788 898 aa12.75□□□□□ -0.37
PRPF18-202ENST00000378572 POLR2JP52435 117 aaKnown RBP12.75□□□□□ -0.37
PRPF18-202ENST00000378572 TRA2BP62995 288 aaKnown RBP12.75□□□□□ -0.37
PRPF18-202ENST00000378572 OR4C11Q6IEV9 310 aa12.75□□□□□ -0.37
PRPF18-202ENST00000378572 Q6ZPB1 254 aaPredicted RBP12.75□□□□□ -0.37
PRPF18-202ENST00000378572 IKBIPQ70UQ0 350 aa12.75□□□□□ -0.37
PRPF18-202ENST00000378572 RIMKLAQ8IXN7 391 aa12.75□□□□□ -0.37
PRPF18-202ENST00000378572 ZCCHC7Q8N3Z6 543 aaKnown RBP12.75□□□□□ -0.37
PRPF18-202ENST00000378572 POU5F2Q8N7G0 328 aa12.75□□□□□ -0.37
PRPF18-202ENST00000378572 CA5BP1Q8WTZ4 195 aa12.75□□□□□ -0.37
PRPF18-202ENST00000378572 SDCCAG3Q96C92 435 aa12.75□□□□□ -0.37
PRPF18-202ENST00000378572 SLC7A6OSQ96CW6 309 aaPredicted RBP12.75□□□□□ -0.37
PRPF18-202ENST00000378572 SPDL1Q96EA4 605 aa12.75□□□□□ -0.37
PRPF18-202ENST00000378572 SMIM10Q96HG1 83 aa12.75□□□□□ -0.37
PRPF18-202ENST00000378572 TSSK3Q96PN8 268 aa12.75□□□□□ -0.37
PRPF18-202ENST00000378572 EBPLQ9BY08 206 aa12.75□□□□□ -0.37
PRPF18-202ENST00000378572 ROGDIQ9GZN7 287 aa12.75□□□□□ -0.37
PRPF18-202ENST00000378572 LRMDAQ9H2I8 198 aa12.75□□□□□ -0.37
PRPF18-202ENST00000378572 COPS7BQ9H9Q2 264 aaPredicted RBP12.75□□□□□ -0.37
PRPF18-202ENST00000378572 MYNNQ9NPC7 610 aa12.75□□□□□ -0.37
PRPF18-202ENST00000378572 SLC52A3Q9NQ40 469 aa12.75□□□□□ -0.37
PRPF18-202ENST00000378572 ERVK-11Q9UQG0 969 aa12.75□□□□□ -0.37
PRPF18-202ENST00000378572 PCNX1Q96RV3 2341 aa12.75□□□□□ -0.37
PRPF18-202ENST00000378572 A0A088AWK7 358 aa12.74□□□□□ -0.37
PRPF18-202ENST00000378572 A0A1W2PP18 115 aa12.74□□□□□ -0.37
PRPF18-202ENST00000378572 GNG14A0A1W2PPG7 69 aa12.74□□□□□ -0.37
PRPF18-202ENST00000378572 KLRC4-KLRK1H3BQV0 150 aa12.74□□□□□ -0.37
PRPF18-202ENST00000378572 ERI3O43414 337 aaKnown RBP12.74□□□□□ -0.37
PRPF18-202ENST00000378572 CD1EP15812 388 aa12.74□□□□□ -0.37
PRPF18-202ENST00000378572 ZNF10P21506 573 aaPredicted RBP12.74□□□□□ -0.37
PRPF18-202ENST00000378572 RPL3P39023 403 aaKnown RBP12.74□□□□□ -0.37
PRPF18-202ENST00000378572 NME5P56597 212 aa12.74□□□□□ -0.37
PRPF18-202ENST00000378572 GPR85P60893 370 aa12.74□□□□□ -0.37
PRPF18-202ENST00000378572 RNFT1Q5M7Z0 435 aa12.74□□□□□ -0.37
PRPF18-202ENST00000378572 CD163Q86VB7 1156 aa12.74□□□□□ -0.37
PRPF18-202ENST00000378572 FAM47BQ8NA70 645 aa12.74□□□□□ -0.37
PRPF18-202ENST00000378572 POGLUT1Q8NBL1 392 aa12.74□□□□□ -0.37
PRPF18-202ENST00000378572 B3GNT7Q8NFL0 401 aa12.74□□□□□ -0.37
PRPF18-202ENST00000378572 ADAMTS18Q8TE60 1221 aa12.74□□□□□ -0.37
PRPF18-202ENST00000378572 TRIM8Q9BZR9 551 aa12.74□□□□□ -0.37
PRPF18-202ENST00000378572 EFCAB1Q9HAE3 211 aa12.74□□□□□ -0.37
PRPF18-202ENST00000378572 CLK4Q9HAZ1 481 aaKnown RBP12.74□□□□□ -0.37
PRPF18-202ENST00000378572 PRDM7Q9NQW5 492 aa12.74□□□□□ -0.37
PRPF18-202ENST00000378572 PRTFDC1Q9NRG1 225 aa12.74□□□□□ -0.37
PRPF18-202ENST00000378572 BAIAP2L1Q9UHR4 511 aa12.74□□□□□ -0.37
PRPF18-202ENST00000378572 MRPS33Q9Y291 106 aaKnown RBP12.74□□□□□ -0.37
PRPF18-202ENST00000378572 NDUFAF1Q9Y375 327 aa12.74□□□□□ -0.37
PRPF18-202ENST00000378572 MMACHCQ9Y4U1 282 aa12.74□□□□□ -0.37
PRPF18-202ENST00000378572 PKDREJQ9NTG1 2253 aa12.74□□□□□ -0.37
PRPF18-202ENST00000378572 A0A0A6YYD5 115 aa12.74□□□□□ -0.37
PRPF18-202ENST00000378572 B2RBV5 119 aa12.74□□□□□ -0.37
PRPF18-202ENST00000378572 C4orf51C9J302 202 aa12.74□□□□□ -0.37
PRPF18-202ENST00000378572 RTCAO00442 366 aaKnown RBP12.74□□□□□ -0.37
PRPF18-202ENST00000378572 NR5A2O00482 541 aa12.74□□□□□ -0.37
PRPF18-202ENST00000378572 CLDN4O14493 209 aa12.74□□□□□ -0.37
PRPF18-202ENST00000378572 CFLARO15519 480 aa12.74□□□□□ -0.37
PRPF18-202ENST00000378572 B3GALT2O43825 422 aa12.74□□□□□ -0.37
PRPF18-202ENST00000378572 PEX1O43933 1283 aa12.74□□□□□ -0.37
PRPF18-202ENST00000378572 HS6ST1O60243 411 aa12.74□□□□□ -0.37
PRPF18-202ENST00000378572 ITGA10O75578 1167 aa12.74□□□□□ -0.37
PRPF18-202ENST00000378572 IFNA16P05015 189 aa12.74□□□□□ -0.37
PRPF18-202ENST00000378572 IL6P05231 212 aa12.74□□□□□ -0.37
PRPF18-202ENST00000378572 KLK1P06870 262 aa12.74□□□□□ -0.37
PRPF18-202ENST00000378572 CAPN3P20807 821 aa12.74□□□□□ -0.37
PRPF18-202ENST00000378572 SSTR2P30874 369 aa12.74□□□□□ -0.37
PRPF18-202ENST00000378572 PTGS2P35354 604 aa12.74□□□□□ -0.37
PRPF18-202ENST00000378572 SSR2P43308 183 aa12.74□□□□□ -0.37
PRPF18-202ENST00000378572 CDSNQ15517 529 aa12.74□□□□□ -0.37
PRPF18-202ENST00000378572 CCNYL2Q5T2Q4 361 aa12.74□□□□□ -0.37
PRPF18-202ENST00000378572 MSANTD1Q6ZTZ1 278 aa12.74□□□□□ -0.37
PRPF18-202ENST00000378572 ASRGL1Q7L266 308 aa12.74□□□□□ -0.37
PRPF18-202ENST00000378572 CAMKMTQ7Z624 323 aa12.74□□□□□ -0.37
PRPF18-202ENST00000378572 DOLPP1Q86YN1 238 aa12.74□□□□□ -0.37
PRPF18-202ENST00000378572 C16orf78Q8WTQ4 265 aa12.74□□□□□ -0.37
PRPF18-202ENST00000378572 NCLNQ969V3 563 aa12.74□□□□□ -0.37
PRPF18-202ENST00000378572 MTERF3Q96E29 417 aa12.74□□□□□ -0.37
PRPF18-202ENST00000378572 VMP1Q96GC9 406 aa12.74□□□□□ -0.37
PRPF18-202ENST00000378572 ZNF764Q96H86 408 aaPredicted RBP12.74□□□□□ -0.37
PRPF18-202ENST00000378572 EGLN2Q96KS0 407 aa12.74□□□□□ -0.37
PRPF18-202ENST00000378572 IGKV3D-11A0A0A0MRZ8 115 aa12.73□□□□□ -0.37
PRPF18-202ENST00000378572 A0A1B0GTH9 108 aa12.73□□□□□ -0.37
PRPF18-202ENST00000378572 CCDC154A6NI56 674 aa12.73□□□□□ -0.37
PRPF18-202ENST00000378572 E9PLN8 166 aa12.73□□□□□ -0.37
PRPF18-202ENST00000378572 CDK2AP1O14519 115 aa12.73□□□□□ -0.37
PRPF18-202ENST00000378572 ANGPT2O15123 496 aa12.73□□□□□ -0.37
PRPF18-202ENST00000378572 SCAMP2O15127 329 aaKnown RBP12.73□□□□□ -0.37
PRPF18-202ENST00000378572 EEDO75530 441 aaKnown RBP12.73□□□□□ -0.37
PRPF18-202ENST00000378572 HIST1H1TP22492 207 aaPredicted RBP12.73□□□□□ -0.37
PRPF18-202ENST00000378572 ATP5A1P25705 553 aaKnown RBP12.73□□□□□ -0.37
PRPF18-202ENST00000378572 PPP2R1BP30154 601 aa12.73□□□□□ -0.37
PRPF18-202ENST00000378572 TRHRP34981 398 aaPredicted RBP12.73□□□□□ -0.37
PRPF18-202ENST00000378572 HPCAL1P37235 193 aa12.73□□□□□ -0.37
PRPF18-202ENST00000378572 CPA2P48052 419 aa12.73□□□□□ -0.37
PRPF18-202ENST00000378572 SSR4P51571 173 aa12.73□□□□□ -0.37
PRPF18-202ENST00000378572 MAPK12P53778 367 aa12.73□□□□□ -0.37
PRPF18-202ENST00000378572 PLA2G16P53816 162 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms