RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 NADKO95544 446 aaPredicted RBP12.24□□□□□ -0.45
CKAP2-202ENST00000378034 F10P00742 488 aa12.24□□□□□ -0.45
CKAP2-202ENST00000378034 S100A3P33764 101 aa12.24□□□□□ -0.45
CKAP2-202ENST00000378034 SOX3P41225 446 aa12.24□□□□□ -0.45
CKAP2-202ENST00000378034 NR0B1P51843 470 aaKnown RBP12.24□□□□□ -0.45
CKAP2-202ENST00000378034 UFM1P61960 85 aa12.24□□□□□ -0.45
CKAP2-202ENST00000378034 LRRC74AQ0VAA2 488 aa12.24□□□□□ -0.45
CKAP2-202ENST00000378034 ZNF766Q5HY98 468 aa12.24□□□□□ -0.45
CKAP2-202ENST00000378034 TMEM198Q66K66 360 aa12.24□□□□□ -0.45
CKAP2-202ENST00000378034 C16orf47Q6ZP98 133 aaPredicted RBP12.24□□□□□ -0.45
CKAP2-202ENST00000378034 CYP4Z2PQ8N1L4 340 aa12.24□□□□□ -0.45
CKAP2-202ENST00000378034 MIER2Q8N344 545 aa12.24□□□□□ -0.45
CKAP2-202ENST00000378034 Q8NA96 180 aa12.24□□□□□ -0.45
CKAP2-202ENST00000378034 TMEM178AQ8NBL3 297 aa12.24□□□□□ -0.45
CKAP2-202ENST00000378034 SIMC1Q8NDZ2 872 aa12.24□□□□□ -0.45
CKAP2-202ENST00000378034 MOAP1Q96BY2 351 aa12.24□□□□□ -0.45
CKAP2-202ENST00000378034 SCMH1Q96GD3 660 aa12.24□□□□□ -0.45
CKAP2-202ENST00000378034 VSTM2LQ96N03 204 aa12.24□□□□□ -0.45
CKAP2-202ENST00000378034 SIGLEC12Q96PQ1 595 aa12.24□□□□□ -0.45
CKAP2-202ENST00000378034 BTBD9Q96Q07 612 aa12.24□□□□□ -0.45
CKAP2-202ENST00000378034 ITPAQ9BY32 194 aa12.24□□□□□ -0.45
CKAP2-202ENST00000378034 TMEM45AQ9NWC5 275 aa12.24□□□□□ -0.45
CKAP2-202ENST00000378034 FAM120CQ9NX05 1096 aaKnown RBP12.24□□□□□ -0.45
CKAP2-202ENST00000378034 ANKRD10Q9NXR5 420 aa12.24□□□□□ -0.45
CKAP2-202ENST00000378034 ERVK-11Q9UQG0 969 aa12.24□□□□□ -0.45
CKAP2-202ENST00000378034 GPR55Q9Y2T6 319 aaPredicted RBP12.24□□□□□ -0.45
CKAP2-202ENST00000378034 PRSS51A0A1B0GVH4 220 aa12.23□□□□□ -0.45
CKAP2-202ENST00000378034 FRG2CA6NGY1 282 aa12.23□□□□□ -0.45
CKAP2-202ENST00000378034 TO15178 435 aa12.23□□□□□ -0.45
CKAP2-202ENST00000378034 EMC8O43402 210 aa12.23□□□□□ -0.45
CKAP2-202ENST00000378034 OR6B1O95007 311 aa12.23□□□□□ -0.45
CKAP2-202ENST00000378034 SP1P08047 785 aa12.23□□□□□ -0.45
CKAP2-202ENST00000378034 FBXO45P0C2W1 286 aa12.23□□□□□ -0.45
CKAP2-202ENST00000378034 NAGAP17050 411 aa12.23□□□□□ -0.45
CKAP2-202ENST00000378034 TMED10P49755 219 aaKnown RBP12.23□□□□□ -0.45
CKAP2-202ENST00000378034 STX1BP61266 288 aa12.23□□□□□ -0.45
CKAP2-202ENST00000378034 PRR5P85299 388 aa12.23□□□□□ -0.45
CKAP2-202ENST00000378034 SPINK14Q6IE38 97 aa12.23□□□□□ -0.45
CKAP2-202ENST00000378034 SLC25A25Q6KCM7 469 aa12.23□□□□□ -0.45
CKAP2-202ENST00000378034 TMEM64Q6YI46 380 aa12.23□□□□□ -0.45
CKAP2-202ENST00000378034 RTL4Q6ZR62 310 aa12.23□□□□□ -0.45
CKAP2-202ENST00000378034 GOLM1Q8NBJ4 401 aa12.23□□□□□ -0.45
CKAP2-202ENST00000378034 FOLH1BQ9HBA9 442 aa12.23□□□□□ -0.45
CKAP2-202ENST00000378034 TIMMDC1Q9NPL8 285 aa12.23□□□□□ -0.45
CKAP2-202ENST00000378034 FGFR1OP2Q9NVK5 253 aa12.23□□□□□ -0.45
CKAP2-202ENST00000378034 PCDHGB4Q9UN71 923 aa12.23□□□□□ -0.45
CKAP2-202ENST00000378034 DTX4Q9Y2E6 619 aa12.23□□□□□ -0.45
CKAP2-202ENST00000378034 BOD1L1Q8NFC6 3051 aa12.23□□□□□ -0.45
CKAP2-202ENST00000378034 ERN1O75460 977 aaKnown RBP12.23□□□□□ -0.45
CKAP2-202ENST00000378034 SLC25A12O75746 678 aa12.23□□□□□ -0.45
CKAP2-202ENST00000378034 IL6P05231 212 aa12.23□□□□□ -0.45
CKAP2-202ENST00000378034 CDK9P50750 372 aaKnown RBP12.23□□□□□ -0.45
CKAP2-202ENST00000378034 ATP4BP51164 291 aa12.23□□□□□ -0.45
CKAP2-202ENST00000378034 NME5P56597 212 aa12.23□□□□□ -0.45
CKAP2-202ENST00000378034 WNT3P56703 355 aa12.23□□□□□ -0.45
CKAP2-202ENST00000378034 ZNHIT3Q15649 155 aaPredicted RBP12.23□□□□□ -0.45
CKAP2-202ENST00000378034 ZNF791Q3KP31 576 aaPredicted RBP12.23□□□□□ -0.45
CKAP2-202ENST00000378034 FAM174BQ3ZCQ3 159 aa12.23□□□□□ -0.45
CKAP2-202ENST00000378034 SPANXN4Q5MJ08 99 aa12.23□□□□□ -0.45
CKAP2-202ENST00000378034 METTL21CQ5VZV1 264 aa12.23□□□□□ -0.45
CKAP2-202ENST00000378034 OR4F3Q6IEY1 312 aa12.23□□□□□ -0.45
CKAP2-202ENST00000378034 ZCCHC12Q6PEW1 402 aa12.23□□□□□ -0.45
CKAP2-202ENST00000378034 LYPD8Q6UX82 237 aa12.23□□□□□ -0.45
CKAP2-202ENST00000378034 IL20RBQ6UXL0 311 aa12.23□□□□□ -0.45
CKAP2-202ENST00000378034 ZNF227Q86WZ6 799 aa12.23□□□□□ -0.45
CKAP2-202ENST00000378034 RFWD2Q8NHY2 731 aa12.23□□□□□ -0.45
CKAP2-202ENST00000378034 NUDT8Q8WV74 236 aa12.23□□□□□ -0.45
CKAP2-202ENST00000378034 SPACA9Q96E40 222 aaPredicted RBP12.23□□□□□ -0.45
CKAP2-202ENST00000378034 TEX37Q96LM6 180 aa12.23□□□□□ -0.45
CKAP2-202ENST00000378034 NXF5Q9H1B4 397 aaKnown RBP12.23□□□□□ -0.45
CKAP2-202ENST00000378034 ANKRA2Q9H9E1 313 aa12.23□□□□□ -0.45
CKAP2-202ENST00000378034 SIRT3Q9NTG7 399 aaPredicted RBP12.23□□□□□ -0.45
CKAP2-202ENST00000378034 DCTN4Q9UJW0 460 aa12.23□□□□□ -0.45
CKAP2-202ENST00000378034 TRIM33Q9UPN9 1127 aa12.23□□□□□ -0.45
CKAP2-202ENST00000378034 NPFFR2Q9Y5X5 522 aa12.23□□□□□ -0.45
CKAP2-202ENST00000378034 CNTRLQ7Z7A1 2325 aa12.22□□□□□ -0.45
CKAP2-202ENST00000378034 CFLARO15519 480 aa12.22□□□□□ -0.45
CKAP2-202ENST00000378034 KALRNO60229 2985 aa12.22□□□□□ -0.45
CKAP2-202ENST00000378034 NME2P1O60361 137 aa12.22□□□□□ -0.45
CKAP2-202ENST00000378034 ZNF354AO60765 605 aaPredicted RBP12.22□□□□□ -0.45
CKAP2-202ENST00000378034 SCN2BO60939 215 aa12.22□□□□□ -0.45
CKAP2-202ENST00000378034 C6orf47O95873 294 aa12.22□□□□□ -0.45
CKAP2-202ENST00000378034 PGRP06401 933 aa12.22□□□□□ -0.45
CKAP2-202ENST00000378034 NME2P22392 152 aa12.22□□□□□ -0.45
CKAP2-202ENST00000378034 BHLHB9Q6PI77 547 aa12.22□□□□□ -0.45
CKAP2-202ENST00000378034 NUP43Q8NFH3 380 aa12.22□□□□□ -0.45
CKAP2-202ENST00000378034 OR56A1Q8NGH5 318 aa12.22□□□□□ -0.45
CKAP2-202ENST00000378034 SFXN5Q8TD22 340 aa12.22□□□□□ -0.45
CKAP2-202ENST00000378034 MAGED4Q96JG8 741 aa12.22□□□□□ -0.45
CKAP2-202ENST00000378034 MARK4Q96L34 752 aa12.22□□□□□ -0.45
CKAP2-202ENST00000378034 RILPQ96NA2 401 aa12.22□□□□□ -0.45
CKAP2-202ENST00000378034 MS4A4EQ96PG1 132 aa12.22□□□□□ -0.45
CKAP2-202ENST00000378034 ZNF317Q96PQ6 595 aaPredicted RBP12.22□□□□□ -0.45
CKAP2-202ENST00000378034 LMF2Q9BU23 707 aaKnown RBP12.22□□□□□ -0.45
CKAP2-202ENST00000378034 RABEP2Q9H5N1 569 aa12.22□□□□□ -0.45
CKAP2-202ENST00000378034 MRGBPQ9NV56 204 aa12.22□□□□□ -0.45
CKAP2-202ENST00000378034 BTNL2Q9UIR0 455 aa12.22□□□□□ -0.45
CKAP2-202ENST00000378034 KLF13Q9Y2Y9 288 aaPredicted RBP12.22□□□□□ -0.45
CKAP2-202ENST00000378034 SPTA1P02549 2419 aa12.22□□□□□ -0.45
CKAP2-202ENST00000378034 A0A0G2JND7 137 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms