RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 SH3BGRLO75368 114 aa12.04□□□□□ -0.48
CLCN6-205ENST00000376492 MYL2P10916 166 aa12.04□□□□□ -0.48
CLCN6-205ENST00000376492 CEACAM8P31997 349 aaPredicted RBP12.04□□□□□ -0.48
CLCN6-205ENST00000376492 ARL1P40616 181 aaPredicted RBP12.04□□□□□ -0.48
CLCN6-205ENST00000376492 ZNF136P52737 540 aa12.04□□□□□ -0.48
CLCN6-205ENST00000376492 POU4F3Q15319 338 aa12.04□□□□□ -0.48
CLCN6-205ENST00000376492 PIGGQ5H8A4 983 aa12.04□□□□□ -0.48
CLCN6-205ENST00000376492 LETMD1Q6P1Q0 360 aa12.04□□□□□ -0.48
CLCN6-205ENST00000376492 LYPD8Q6UX82 237 aa12.04□□□□□ -0.48
CLCN6-205ENST00000376492 C9orf40Q8IXQ3 194 aa12.04□□□□□ -0.48
CLCN6-205ENST00000376492 C4orf33Q8N1A6 199 aa12.04□□□□□ -0.48
CLCN6-205ENST00000376492 LRRC25Q8N386 305 aaPredicted RBP12.04□□□□□ -0.48
CLCN6-205ENST00000376492 VWA5B2Q8N398 1253 aa12.04□□□□□ -0.48
CLCN6-205ENST00000376492 OR5L2Q8NGL0 311 aa12.04□□□□□ -0.48
CLCN6-205ENST00000376492 NEIL3Q8TAT5 605 aa12.04□□□□□ -0.48
CLCN6-205ENST00000376492 TCP10LQ8TDR4 215 aa12.04□□□□□ -0.48
CLCN6-205ENST00000376492 PAQR8Q8TEZ7 354 aa12.04□□□□□ -0.48
CLCN6-205ENST00000376492 JSRP1Q96MG2 331 aaPredicted RBP12.04□□□□□ -0.48
CLCN6-205ENST00000376492 ZNF382Q96SR6 550 aa12.04□□□□□ -0.48
CLCN6-205ENST00000376492 SERPINI1Q99574 410 aa12.04□□□□□ -0.48
CLCN6-205ENST00000376492 MAPKAP1Q9BPZ7 522 aa12.04□□□□□ -0.48
CLCN6-205ENST00000376492 ZNF717Q9BY31 904 aaPredicted RBP12.04□□□□□ -0.48
CLCN6-205ENST00000376492 DDX31Q9H8H2 851 aaKnown RBP12.04□□□□□ -0.48
CLCN6-205ENST00000376492 PRM3Q9NNZ6 103 aa12.04□□□□□ -0.48
CLCN6-205ENST00000376492 ZFP64Q9NPA5 681 aa12.04□□□□□ -0.48
CLCN6-205ENST00000376492 KCNK9Q9NPC2 374 aa12.04□□□□□ -0.48
CLCN6-205ENST00000376492 COPS7AQ9UBW8 275 aa12.04□□□□□ -0.48
CLCN6-205ENST00000376492 TRPS1Q9UHF7 1281 aa12.04□□□□□ -0.48
CLCN6-205ENST00000376492 C15orf38-AP3S2A0A0A6YYH1 394 aa12.03□□□□□ -0.48
CLCN6-205ENST00000376492 A0A1W2PPR1 153 aa12.03□□□□□ -0.48
CLCN6-205ENST00000376492 SYNDIG1LA6NDD5 238 aa12.03□□□□□ -0.48
CLCN6-205ENST00000376492 CLCA1A8K7I4 914 aa12.03□□□□□ -0.48
CLCN6-205ENST00000376492 HRKO00198 91 aa12.03□□□□□ -0.48
CLCN6-205ENST00000376492 SEMA3DO95025 777 aa12.03□□□□□ -0.48
CLCN6-205ENST00000376492 HEXAP06865 529 aa12.03□□□□□ -0.48
CLCN6-205ENST00000376492 EPXP11678 715 aa12.03□□□□□ -0.48
CLCN6-205ENST00000376492 CPA3P15088 417 aa12.03□□□□□ -0.48
CLCN6-205ENST00000376492 TSPAN8P19075 237 aa12.03□□□□□ -0.48
CLCN6-205ENST00000376492 CD53P19397 219 aa12.03□□□□□ -0.48
CLCN6-205ENST00000376492 BSGP35613 385 aa12.03□□□□□ -0.48
CLCN6-205ENST00000376492 SSR2P43308 183 aa12.03□□□□□ -0.48
CLCN6-205ENST00000376492 RAP1GDS1P52306 607 aa12.03□□□□□ -0.48
CLCN6-205ENST00000376492 AGFG1P52594 562 aaKnown RBP12.03□□□□□ -0.48
CLCN6-205ENST00000376492 DNAJB13P59910 316 aa12.03□□□□□ -0.48
CLCN6-205ENST00000376492 DCAF7P61962 342 aa12.03□□□□□ -0.48
CLCN6-205ENST00000376492 IFT88Q13099 833 aa12.03□□□□□ -0.48
CLCN6-205ENST00000376492 SLAMF1Q13291 335 aa12.03□□□□□ -0.48
CLCN6-205ENST00000376492 MPEG1Q2M385 716 aa12.03□□□□□ -0.48
CLCN6-205ENST00000376492 SLC22A10Q63ZE4 541 aa12.03□□□□□ -0.48
CLCN6-205ENST00000376492 TTC19Q6DKK2 380 aaPredicted RBP12.03□□□□□ -0.48
CLCN6-205ENST00000376492 LIX1Q8N485 282 aa12.03□□□□□ -0.48
CLCN6-205ENST00000376492 FAM13CQ8NE31 585 aa12.03□□□□□ -0.48
CLCN6-205ENST00000376492 OR10G3Q8NGC4 313 aa12.03□□□□□ -0.48
CLCN6-205ENST00000376492 DOK4Q8TEW6 326 aa12.03□□□□□ -0.48
CLCN6-205ENST00000376492 ANKRD9Q96BM1 317 aaPredicted RBP12.03□□□□□ -0.48
CLCN6-205ENST00000376492 SPACA9Q96E40 222 aaPredicted RBP12.03□□□□□ -0.48
CLCN6-205ENST00000376492 LRRC46Q96FV0 321 aa12.03□□□□□ -0.48
CLCN6-205ENST00000376492 SORBS1Q9BX66 1292 aaKnown RBP12.03□□□□□ -0.48
CLCN6-205ENST00000376492 ELOVL6Q9H5J4 265 aa12.03□□□□□ -0.48
CLCN6-205ENST00000376492 ZNF395Q9H8N7 513 aaPredicted RBP12.03□□□□□ -0.48
CLCN6-205ENST00000376492 NEUROD4Q9HD90 331 aa12.03□□□□□ -0.48
CLCN6-205ENST00000376492 MS4A12Q9NXJ0 267 aa12.03□□□□□ -0.48
CLCN6-205ENST00000376492 BOKQ9UMX3 212 aaPredicted RBP12.03□□□□□ -0.48
CLCN6-205ENST00000376492 SNX6Q9UNH7 406 aa12.03□□□□□ -0.48
CLCN6-205ENST00000376492 STK38LQ9Y2H1 464 aa12.03□□□□□ -0.48
CLCN6-205ENST00000376492 PCDHGB3Q9Y5G1 929 aa12.03□□□□□ -0.48
CLCN6-205ENST00000376492 CHCHD2Q9Y6H1 151 aaPredicted RBP12.03□□□□□ -0.48
CLCN6-205ENST00000376492 A0A0A6YYD5 115 aa12.02□□□□□ -0.49
CLCN6-205ENST00000376492 EEF1E1-BLOC1S5C9J1V9 151 aa12.02□□□□□ -0.49
CLCN6-205ENST00000376492 EEF1E1O43324 174 aaKnown RBP12.02□□□□□ -0.49
CLCN6-205ENST00000376492 OR4F21O95013 312 aa12.02□□□□□ -0.49
CLCN6-205ENST00000376492 LY6G6DO95868 133 aa12.02□□□□□ -0.49
CLCN6-205ENST00000376492 EPPINO95925 133 aa12.02□□□□□ -0.49
CLCN6-205ENST00000376492 CHN1P15882 459 aa12.02□□□□□ -0.49
CLCN6-205ENST00000376492 CREB1P16220 341 aa12.02□□□□□ -0.49
CLCN6-205ENST00000376492 SERPINB5P36952 375 aa12.02□□□□□ -0.49
CLCN6-205ENST00000376492 PKNOX1P55347 436 aa12.02□□□□□ -0.49
CLCN6-205ENST00000376492 NKX6-1P78426 367 aaPredicted RBP12.02□□□□□ -0.49
CLCN6-205ENST00000376492 CRYZQ08257 329 aaKnown RBP12.02□□□□□ -0.49
CLCN6-205ENST00000376492 LCP2Q13094 533 aa12.02□□□□□ -0.49
CLCN6-205ENST00000376492 DUSP8Q13202 625 aa12.02□□□□□ -0.49
CLCN6-205ENST00000376492 SERTAD2Q14140 314 aa12.02□□□□□ -0.49
CLCN6-205ENST00000376492 MRM1Q6IN84 353 aaKnown RBP12.02□□□□□ -0.49
CLCN6-205ENST00000376492 DGAT2L6Q6ZPD8 337 aa12.02□□□□□ -0.49
CLCN6-205ENST00000376492 GPRIN3Q6ZVF9 776 aa12.02□□□□□ -0.49
CLCN6-205ENST00000376492 GPR180Q86V85 440 aa12.02□□□□□ -0.49
CLCN6-205ENST00000376492 LACC1Q8IV20 430 aa12.02□□□□□ -0.49
CLCN6-205ENST00000376492 OR4N5Q8IXE1 308 aa12.02□□□□□ -0.49
CLCN6-205ENST00000376492 KIRREL3Q8IZU9 778 aa12.02□□□□□ -0.49
CLCN6-205ENST00000376492 CIARTQ8N365 385 aaPredicted RBP12.02□□□□□ -0.49
CLCN6-205ENST00000376492 C7orf57Q8NEG2 295 aa12.02□□□□□ -0.49
CLCN6-205ENST00000376492 NUBPLQ8TB37 319 aa12.02□□□□□ -0.49
CLCN6-205ENST00000376492 SLC22A8Q8TCC7 542 aa12.02□□□□□ -0.49
CLCN6-205ENST00000376492 PPWD1Q96BP3 646 aaKnown RBP12.02□□□□□ -0.49
CLCN6-205ENST00000376492 MAGEB18Q96M61 343 aa12.02□□□□□ -0.49
CLCN6-205ENST00000376492 C12orf65Q9H3J6 166 aaKnown RBP12.02□□□□□ -0.49
CLCN6-205ENST00000376492 GSTO2Q9H4Y5 243 aa12.02□□□□□ -0.49
CLCN6-205ENST00000376492 BRF2Q9HAW0 419 aa12.02□□□□□ -0.49
CLCN6-205ENST00000376492 ACKR4Q9NPB9 350 aa12.02□□□□□ -0.49
CLCN6-205ENST00000376492 FARSBQ9NSD9 589 aaKnown RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms