RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 NCKAP1Q9Y2A7 1128 aa12.21□□□□□ -0.45
MSH5-204ENST00000375755 SF3B6Q9Y3B4 125 aaKnown RBP12.21□□□□□ -0.45
MSH5-204ENST00000375755 ENPP4Q9Y6X5 453 aa12.21□□□□□ -0.45
MSH5-204ENST00000375755 KPNA3O00505 521 aaPredicted RBP12.21□□□□□ -0.46
MSH5-204ENST00000375755 RECKO95980 971 aa12.21□□□□□ -0.46
MSH5-204ENST00000375755 TP53P04637 393 aaPredicted RBP12.21□□□□□ -0.46
MSH5-204ENST00000375755 ITPKAP23677 461 aa12.21□□□□□ -0.46
MSH5-204ENST00000375755 DDX39BQ13838 428 aaKnown RBP12.21□□□□□ -0.46
MSH5-204ENST00000375755 EXOSC2Q13868 293 aaKnown RBP12.21□□□□□ -0.46
MSH5-204ENST00000375755 PUS10Q3MIT2 529 aaKnown RBP12.21□□□□□ -0.46
MSH5-204ENST00000375755 PLK5Q496M5 336 aa12.21□□□□□ -0.46
MSH5-204ENST00000375755 OR2G6Q5TZ20 316 aa12.21□□□□□ -0.46
MSH5-204ENST00000375755 TANGO2Q6ICL3 276 aa12.21□□□□□ -0.46
MSH5-204ENST00000375755 MACC1Q6ZN28 852 aa12.21□□□□□ -0.46
MSH5-204ENST00000375755 PARS2Q7L3T8 475 aaKnown RBP12.21□□□□□ -0.46
MSH5-204ENST00000375755 LAPTM4BQ86VI4 370 aa12.21□□□□□ -0.46
MSH5-204ENST00000375755 TAGAPQ8N103 731 aa12.21□□□□□ -0.46
MSH5-204ENST00000375755 ZNF655Q8N720 491 aaPredicted RBP12.21□□□□□ -0.46
MSH5-204ENST00000375755 OR52I1Q8NGK6 324 aa12.21□□□□□ -0.46
MSH5-204ENST00000375755 OR4A15Q8NGL6 344 aa12.21□□□□□ -0.46
MSH5-204ENST00000375755 SKA2Q8WVK7 121 aaPredicted RBP12.21□□□□□ -0.46
MSH5-204ENST00000375755 METTL2AQ96IZ6 378 aaKnown RBP12.21□□□□□ -0.46
MSH5-204ENST00000375755 ASB16Q96NS5 453 aa12.21□□□□□ -0.46
MSH5-204ENST00000375755 NKX2-4Q9H2Z4 354 aa12.21□□□□□ -0.46
MSH5-204ENST00000375755 DOCK8Q8NF50 2099 aa12.2□□□□□ -0.46
MSH5-204ENST00000375755 PRR23AA6NEV1 266 aa12.2□□□□□ -0.46
MSH5-204ENST00000375755 SGK494L7N484 410 aa12.2□□□□□ -0.46
MSH5-204ENST00000375755 ZNF197O14709 1029 aa12.2□□□□□ -0.46
MSH5-204ENST00000375755 OSMP13725 252 aa12.2□□□□□ -0.46
MSH5-204ENST00000375755 HK1P19367 917 aa12.2□□□□□ -0.46
MSH5-204ENST00000375755 AOAHP28039 575 aa12.2□□□□□ -0.46
MSH5-204ENST00000375755 FABP5Q01469 135 aa12.2□□□□□ -0.46
MSH5-204ENST00000375755 DBPQ10586 325 aaPredicted RBP12.2□□□□□ -0.46
MSH5-204ENST00000375755 RPA4Q13156 261 aa12.2□□□□□ -0.46
MSH5-204ENST00000375755 RIN1Q13671 783 aa12.2□□□□□ -0.46
MSH5-204ENST00000375755 GPR176Q14439 515 aa12.2□□□□□ -0.46
MSH5-204ENST00000375755 GRK1Q15835 563 aa12.2□□□□□ -0.46
MSH5-204ENST00000375755 SNAPC1Q16533 368 aa12.2□□□□□ -0.46
MSH5-204ENST00000375755 SPDYE7PQ495Y7 208 aa12.2□□□□□ -0.46
MSH5-204ENST00000375755 BCL2L15Q5TBC7 163 aa12.2□□□□□ -0.46
MSH5-204ENST00000375755 RNLSQ5VYX0 342 aa12.2□□□□□ -0.46
MSH5-204ENST00000375755 TMEM107Q6UX40 140 aa12.2□□□□□ -0.46
MSH5-204ENST00000375755 LRRC70Q7Z2Q7 622 aa12.2□□□□□ -0.46
MSH5-204ENST00000375755 GPALPP1Q8IXQ4 340 aa12.2□□□□□ -0.46
MSH5-204ENST00000375755 HUS1BQ8NHY5 278 aa12.2□□□□□ -0.46
MSH5-204ENST00000375755 MTERF1Q99551 399 aaKnown RBP12.2□□□□□ -0.46
MSH5-204ENST00000375755 PLA2G2FQ9BZM2 168 aa12.2□□□□□ -0.46
MSH5-204ENST00000375755 SLCO1C1Q9NYB5 712 aa12.2□□□□□ -0.46
MSH5-204ENST00000375755 ZNF222Q9UK12 451 aa12.2□□□□□ -0.46
MSH5-204ENST00000375755 SLC22A14Q9Y267 594 aa12.2□□□□□ -0.46
MSH5-204ENST00000375755 FFAR1O14842 300 aa12.2□□□□□ -0.46
MSH5-204ENST00000375755 APOL3O95236 402 aa12.2□□□□□ -0.46
MSH5-204ENST00000375755 MPC2O95563 127 aa12.2□□□□□ -0.46
MSH5-204ENST00000375755 RB1P06400 928 aa12.2□□□□□ -0.46
MSH5-204ENST00000375755 NNMTP40261 264 aa12.2□□□□□ -0.46
MSH5-204ENST00000375755 NSG1P42857 185 aa12.2□□□□□ -0.46
MSH5-204ENST00000375755 GSTM5P46439 218 aa12.2□□□□□ -0.46
MSH5-204ENST00000375755 ERVK-21P61565 698 aa12.2□□□□□ -0.46
MSH5-204ENST00000375755 GPR33Q49SQ1 333 aa12.2□□□□□ -0.46
MSH5-204ENST00000375755 GCNT6Q5T4J0 391 aa12.2□□□□□ -0.46
MSH5-204ENST00000375755 C12orf73Q69YU5 71 aa12.2□□□□□ -0.46
MSH5-204ENST00000375755 QSOX2Q6ZRP7 698 aa12.2□□□□□ -0.46
MSH5-204ENST00000375755 LRRC17Q8N6Y2 441 aa12.2□□□□□ -0.46
MSH5-204ENST00000375755 ZBTB44Q8NCP5 570 aa12.2□□□□□ -0.46
MSH5-204ENST00000375755 PKP4Q99569 1192 aa12.2□□□□□ -0.46
MSH5-204ENST00000375755 ATF6BQ99941 703 aa12.2□□□□□ -0.46
MSH5-204ENST00000375755 FOLH1BQ9HBA9 442 aa12.2□□□□□ -0.46
MSH5-204ENST00000375755 MRPL39Q9NYK5 338 aaKnown RBP12.2□□□□□ -0.46
MSH5-204ENST00000375755 NDOR1Q9UHB4 597 aa12.2□□□□□ -0.46
MSH5-204ENST00000375755 ACSL6Q9UKU0 697 aa12.2□□□□□ -0.46
MSH5-204ENST00000375755 TRBC2A0A5B9 178 aa12.19□□□□□ -0.46
MSH5-204ENST00000375755 H3BN98 237 aa12.19□□□□□ -0.46
MSH5-204ENST00000375755 K7ESM1 405 aa12.19□□□□□ -0.46
MSH5-204ENST00000375755 CASKO14936 926 aa12.19□□□□□ -0.46
MSH5-204ENST00000375755 SPINT1O43278 529 aa12.19□□□□□ -0.46
MSH5-204ENST00000375755 SGTAO43765 313 aa12.19□□□□□ -0.46
MSH5-204ENST00000375755 SSTR2P30874 369 aa12.19□□□□□ -0.46
MSH5-204ENST00000375755 CHIT1Q13231 466 aa12.19□□□□□ -0.46
MSH5-204ENST00000375755 SEC23BQ15437 767 aa12.19□□□□□ -0.46
MSH5-204ENST00000375755 CLLU1Q5K131 121 aa12.19□□□□□ -0.46
MSH5-204ENST00000375755 METAP1DQ6UB28 335 aaPredicted RBP12.19□□□□□ -0.46
MSH5-204ENST00000375755 GPAT4Q86UL3 456 aa12.19□□□□□ -0.46
MSH5-204ENST00000375755 ETFBKMTQ8IXQ9 262 aa12.19□□□□□ -0.46
MSH5-204ENST00000375755 IQCF1Q8N6M8 205 aa12.19□□□□□ -0.46
MSH5-204ENST00000375755 TMEM121BQ9BXQ6 578 aaPredicted RBP12.19□□□□□ -0.46
MSH5-204ENST00000375755 VPS29Q9UBQ0 182 aa12.19□□□□□ -0.46
MSH5-204ENST00000375755 HCN2Q9UL51 889 aa12.19□□□□□ -0.46
MSH5-204ENST00000375755 DIMT1Q9UNQ2 313 aaKnown RBP12.19□□□□□ -0.46
MSH5-204ENST00000375755 PLXNA2O75051 1894 aa12.19□□□□□ -0.46
MSH5-204ENST00000375755 PAHP00439 452 aa12.19□□□□□ -0.46
MSH5-204ENST00000375755 PCSK2P16519 638 aa12.19□□□□□ -0.46
MSH5-204ENST00000375755 CD22P20273 847 aa12.19□□□□□ -0.46
MSH5-204ENST00000375755 IDSP22304 550 aa12.19□□□□□ -0.46
MSH5-204ENST00000375755 VIPR1P32241 457 aa12.19□□□□□ -0.46
MSH5-204ENST00000375755 BDKRB1P46663 353 aa12.19□□□□□ -0.46
MSH5-204ENST00000375755 BTG1P62324 171 aa12.19□□□□□ -0.46
MSH5-204ENST00000375755 ILKQ13418 452 aa12.19□□□□□ -0.46
MSH5-204ENST00000375755 COL28A1Q2UY09 1125 aa12.19□□□□□ -0.46
MSH5-204ENST00000375755 ZNF385BQ569K4 471 aa12.19□□□□□ -0.46
MSH5-204ENST00000375755 GARNL3Q5VVW2 1013 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms