RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 LTB4RQ15722 352 aa19.46■□□□□ 0.71
TMEFF1-201ENST00000374879 RNASE12Q5GAN4 147 aaKnown RBP19.46■□□□□ 0.71
TMEFF1-201ENST00000374879 CPTPQ5TA50 214 aa19.46■□□□□ 0.71
TMEFF1-201ENST00000374879 PRAMEF9Q5VWM5 478 aa19.46■□□□□ 0.71
TMEFF1-201ENST00000374879 ZNF600Q6ZNG1 722 aa19.46■□□□□ 0.71
TMEFF1-201ENST00000374879 ELMOD3Q96FG2 381 aa19.46■□□□□ 0.71
TMEFF1-201ENST00000374879 DMRTA2Q96SC8 542 aa19.46■□□□□ 0.71
TMEFF1-201ENST00000374879 POLR2J3Q9H1A7 115 aaKnown RBP19.46■□□□□ 0.71
TMEFF1-201ENST00000374879 AIPO00170 330 aa19.46■□□□□ 0.71
TMEFF1-201ENST00000374879 PRMT3O60678 531 aa19.46■□□□□ 0.71
TMEFF1-201ENST00000374879 SLC6A4P31645 630 aa19.46■□□□□ 0.71
TMEFF1-201ENST00000374879 CAMK1Q14012 370 aa19.46■□□□□ 0.71
TMEFF1-201ENST00000374879 XKR6Q5GH73 641 aa19.46■□□□□ 0.71
TMEFF1-201ENST00000374879 GCNT6Q5T4J0 391 aa19.46■□□□□ 0.71
TMEFF1-201ENST00000374879 ALG1LQ6GMV1 187 aa19.46■□□□□ 0.71
TMEFF1-201ENST00000374879 MON1AQ86VX9 555 aa19.46■□□□□ 0.71
TMEFF1-201ENST00000374879 FAM26EQ8N5C1 309 aa19.46■□□□□ 0.71
TMEFF1-201ENST00000374879 TRPV1Q8NER1 839 aa19.46■□□□□ 0.71
TMEFF1-201ENST00000374879 OR5M3Q8NGP4 307 aa19.46■□□□□ 0.71
TMEFF1-201ENST00000374879 ARHGAP9Q9BRR9 750 aa19.46■□□□□ 0.71
TMEFF1-201ENST00000374879 LINC00597Q9H2U6 94 aa19.46■□□□□ 0.71
TMEFF1-201ENST00000374879 AFF4Q9UHB7 1163 aaKnown RBP19.46■□□□□ 0.71
TMEFF1-201ENST00000374879 BTNL2Q9UIR0 455 aa19.46■□□□□ 0.71
TMEFF1-201ENST00000374879 MGAT4BQ9UQ53 548 aa19.46■□□□□ 0.71
TMEFF1-201ENST00000374879 TMEM129A0AVI4 362 aa19.45■□□□□ 0.7
TMEFF1-201ENST00000374879 OPRD1P41143 372 aa19.45■□□□□ 0.7
TMEFF1-201ENST00000374879 PITPNBP48739 271 aa19.45■□□□□ 0.7
TMEFF1-201ENST00000374879 CRB2Q5IJ48 1285 aa19.45■□□□□ 0.7
TMEFF1-201ENST00000374879 PAQR7Q86WK9 346 aa19.45■□□□□ 0.7
TMEFF1-201ENST00000374879 SEMA3GQ9NS98 782 aa19.45■□□□□ 0.7
TMEFF1-201ENST00000374879 ING1Q9UK53 422 aaPredicted RBP19.45■□□□□ 0.7
TMEFF1-201ENST00000374879 SCN10AQ9Y5Y9 1956 aa19.45■□□□□ 0.7
TMEFF1-201ENST00000374879 SCAMP2O15127 329 aaKnown RBP19.45■□□□□ 0.7
TMEFF1-201ENST00000374879 INSIG1O15503 277 aa19.45■□□□□ 0.7
TMEFF1-201ENST00000374879 SH3BGRLO75368 114 aa19.45■□□□□ 0.7
TMEFF1-201ENST00000374879 HSD3B1P14060 373 aa19.45■□□□□ 0.7
TMEFF1-201ENST00000374879 TYMPP19971 482 aa19.45■□□□□ 0.7
TMEFF1-201ENST00000374879 EFEMP1Q12805 493 aa19.45■□□□□ 0.7
TMEFF1-201ENST00000374879 FRG2Q64ET8 278 aa19.45■□□□□ 0.7
TMEFF1-201ENST00000374879 LHFPL3Q86UP9 236 aa19.45■□□□□ 0.7
TMEFF1-201ENST00000374879 FCRL1Q96LA6 429 aa19.45■□□□□ 0.7
TMEFF1-201ENST00000374879 FRG2BQ96QU4 278 aa19.45■□□□□ 0.7
TMEFF1-201ENST00000374879 TMEM121BQ9BXQ6 578 aaPredicted RBP19.45■□□□□ 0.7
TMEFF1-201ENST00000374879 ADGRE3Q9BY15 652 aa19.45■□□□□ 0.7
TMEFF1-201ENST00000374879 ARL15Q9NXU5 204 aa19.45■□□□□ 0.7
TMEFF1-201ENST00000374879 CLCA2Q9UQC9 943 aa19.45■□□□□ 0.7
TMEFF1-201ENST00000374879 ANKRD66B4E2M5 251 aa19.44■□□□□ 0.7
TMEFF1-201ENST00000374879 RFXAPO00287 272 aa19.44■□□□□ 0.7
TMEFF1-201ENST00000374879 SGTAO43765 313 aa19.44■□□□□ 0.7
TMEFF1-201ENST00000374879 IFNA14P01570 189 aa19.44■□□□□ 0.7
TMEFF1-201ENST00000374879 IFNW1P05000 195 aa19.44■□□□□ 0.7
TMEFF1-201ENST00000374879 ANXA5P08758 320 aa19.44■□□□□ 0.7
TMEFF1-201ENST00000374879 FOSL1P15407 271 aa19.44■□□□□ 0.7
TMEFF1-201ENST00000374879 HNMTP50135 292 aa19.44■□□□□ 0.7
TMEFF1-201ENST00000374879 CACNG1Q06432 222 aa19.44■□□□□ 0.7
TMEFF1-201ENST00000374879 CRHR2Q13324 411 aa19.44■□□□□ 0.7
TMEFF1-201ENST00000374879 PUM1Q14671 1186 aaKnown RBP eCLIP19.44■□□□□ 0.7
TMEFF1-201ENST00000374879 UAP1L1Q3KQV9 507 aa19.44■□□□□ 0.7
TMEFF1-201ENST00000374879 FGD2Q7Z6J4 655 aa19.44■□□□□ 0.7
TMEFF1-201ENST00000374879 SIAH3Q8IW03 269 aa19.44■□□□□ 0.7
TMEFF1-201ENST00000374879 UROC1Q96N76 676 aa19.44■□□□□ 0.7
TMEFF1-201ENST00000374879 ISYNA1Q9NPH2 558 aa19.44■□□□□ 0.7
TMEFF1-201ENST00000374879 ACSL6Q9UKU0 697 aa19.44■□□□□ 0.7
TMEFF1-201ENST00000374879 SCML2Q9UQR0 700 aa19.44■□□□□ 0.7
TMEFF1-201ENST00000374879 ANXA2P2A6NMY6 339 aa19.44■□□□□ 0.7
TMEFF1-201ENST00000374879 L7N2F9 121 aa19.44■□□□□ 0.7
TMEFF1-201ENST00000374879 SIGLEC6O43699 453 aa19.44■□□□□ 0.7
TMEFF1-201ENST00000374879 B4GALT3O60512 393 aa19.44■□□□□ 0.7
TMEFF1-201ENST00000374879 KDM4BO94953 1096 aa19.44■□□□□ 0.7
TMEFF1-201ENST00000374879 TBX18O95935 607 aa19.44■□□□□ 0.7
TMEFF1-201ENST00000374879 CD3GP09693 182 aa19.44■□□□□ 0.7
TMEFF1-201ENST00000374879 CELP19835 753 aa19.44■□□□□ 0.7
TMEFF1-201ENST00000374879 ATP5A1P25705 553 aaKnown RBP19.44■□□□□ 0.7
TMEFF1-201ENST00000374879 GRK4P32298 578 aa19.44■□□□□ 0.7
TMEFF1-201ENST00000374879 HAAOP46952 286 aa19.44■□□□□ 0.7
TMEFF1-201ENST00000374879 CDK6Q00534 326 aa19.44■□□□□ 0.7
TMEFF1-201ENST00000374879 PABPC1L2AQ5JQF8 200 aa19.44■□□□□ 0.7
TMEFF1-201ENST00000374879 MPP7Q5T2T1 576 aa19.44■□□□□ 0.7
TMEFF1-201ENST00000374879 SERPINA9Q86WD7 417 aa19.44■□□□□ 0.7
TMEFF1-201ENST00000374879 LRRC28Q86X40 367 aaPredicted RBP19.44■□□□□ 0.7
TMEFF1-201ENST00000374879 ZBTB2Q8N680 514 aa19.44■□□□□ 0.7
TMEFF1-201ENST00000374879 VPS37AQ8NEZ2 397 aa19.44■□□□□ 0.7
TMEFF1-201ENST00000374879 RNFT2Q96EX2 444 aa19.44■□□□□ 0.7
TMEFF1-201ENST00000374879 KCND3Q9UK17 655 aa19.44■□□□□ 0.7
TMEFF1-201ENST00000374879 ZNF593O00488 134 aaPredicted RBP19.43■□□□□ 0.7
TMEFF1-201ENST00000374879 LIMS3P0CW19 117 aa19.43■□□□□ 0.7
TMEFF1-201ENST00000374879 LIMS4P0CW20 117 aa19.43■□□□□ 0.7
TMEFF1-201ENST00000374879 DRD5P21918 477 aa19.43■□□□□ 0.7
TMEFF1-201ENST00000374879 VIPR1P32241 457 aa19.43■□□□□ 0.7
TMEFF1-201ENST00000374879 RPIAP49247 311 aa19.43■□□□□ 0.7
TMEFF1-201ENST00000374879 PDSS1Q5T2R2 415 aa19.43■□□□□ 0.7
TMEFF1-201ENST00000374879 SAMD12Q8N8I0 201 aa19.43■□□□□ 0.7
TMEFF1-201ENST00000374879 CNOT9Q92600 299 aaKnown RBP19.43■□□□□ 0.7
TMEFF1-201ENST00000374879 MRPS24Q96EL2 167 aaKnown RBP19.43■□□□□ 0.7
TMEFF1-201ENST00000374879 FUBP3Q96I24 572 aaKnown RBP eCLIP19.43■□□□□ 0.7
TMEFF1-201ENST00000374879 HIST1H2AHQ96KK5 128 aa19.43■□□□□ 0.7
TMEFF1-201ENST00000374879 LINC00587B1AMM8 73 aa19.43■□□□□ 0.7
TMEFF1-201ENST00000374879 NPIPB8E9PQR5 432 aa19.43■□□□□ 0.7
TMEFF1-201ENST00000374879 H7C0S8 307 aa19.43■□□□□ 0.7
TMEFF1-201ENST00000374879 PRAMEF12O95522 483 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms