RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 FCGR1BQ92637 280 aa14.63□□□□□ -0.07
CCDC40-202ENST00000374876 PROX1Q92786 737 aa14.63□□□□□ -0.07
CCDC40-202ENST00000374876 RAB8BQ92930 207 aa14.63□□□□□ -0.07
CCDC40-202ENST00000374876 GTPBP3Q969Y2 492 aaKnown RBP14.63□□□□□ -0.07
CCDC40-202ENST00000374876 ALPK1Q96QP1 1244 aa14.63□□□□□ -0.07
CCDC40-202ENST00000374876 SIGLEC11Q96RL6 698 aa14.63□□□□□ -0.07
CCDC40-202ENST00000374876 DDX31Q9H8H2 851 aaKnown RBP14.63□□□□□ -0.07
CCDC40-202ENST00000374876 RHCGQ9UBD6 479 aa14.63□□□□□ -0.07
CCDC40-202ENST00000374876 A0A0G2JN53 185 aa14.62□□□□□ -0.07
CCDC40-202ENST00000374876 OR2A25A4D2G3 310 aa14.62□□□□□ -0.07
CCDC40-202ENST00000374876 TMEM247A6NEH6 219 aa14.62□□□□□ -0.07
CCDC40-202ENST00000374876 PRR19A6NJB7 356 aa14.62□□□□□ -0.07
CCDC40-202ENST00000374876 J3QRK9 145 aa14.62□□□□□ -0.07
CCDC40-202ENST00000374876 MAGEB3O15480 346 aa14.62□□□□□ -0.07
CCDC40-202ENST00000374876 PDE9AO76083 593 aa14.62□□□□□ -0.07
CCDC40-202ENST00000374876 LCKP06239 509 aa14.62□□□□□ -0.07
CCDC40-202ENST00000374876 TFPTP0C1Z6 253 aa14.62□□□□□ -0.07
CCDC40-202ENST00000374876 ALDH4A1P30038 563 aa14.62□□□□□ -0.07
CCDC40-202ENST00000374876 GRK3P35626 688 aa14.62□□□□□ -0.07
CCDC40-202ENST00000374876 FRKP42685 505 aaPredicted RBP14.62□□□□□ -0.07
CCDC40-202ENST00000374876 CCT3P49368 545 aaKnown RBP14.62□□□□□ -0.07
CCDC40-202ENST00000374876 VBP1P61758 197 aa14.62□□□□□ -0.07
CCDC40-202ENST00000374876 NR0B2Q15466 257 aa14.62□□□□□ -0.07
CCDC40-202ENST00000374876 UBE2UQ5VVX9 321 aa14.62□□□□□ -0.07
CCDC40-202ENST00000374876 CCDC103Q8IW40 242 aa14.62□□□□□ -0.07
CCDC40-202ENST00000374876 DNAJC22Q8N4W6 341 aa14.62□□□□□ -0.07
CCDC40-202ENST00000374876 AQP11Q8NBQ7 271 aa14.62□□□□□ -0.07
CCDC40-202ENST00000374876 NDNFQ8TB73 568 aa14.62□□□□□ -0.07
CCDC40-202ENST00000374876 ZNF764Q96H86 408 aaPredicted RBP14.62□□□□□ -0.07
CCDC40-202ENST00000374876 C17orf62Q9BQA9 187 aa14.62□□□□□ -0.07
CCDC40-202ENST00000374876 PSD2Q9BQI7 771 aa14.62□□□□□ -0.07
CCDC40-202ENST00000374876 RAB11FIP5Q9BXF6 653 aa14.62□□□□□ -0.07
CCDC40-202ENST00000374876 AMBNQ9NP70 447 aa14.62□□□□□ -0.07
CCDC40-202ENST00000374876 SIRT3Q9NTG7 399 aaPredicted RBP14.62□□□□□ -0.07
CCDC40-202ENST00000374876 ACSS1Q9NUB1 689 aaPredicted RBP14.62□□□□□ -0.07
CCDC40-202ENST00000374876 ASXL3Q9C0F0 2248 aa14.62□□□□□ -0.07
CCDC40-202ENST00000374876 COL5A1P20908 1838 aaPredicted RBP14.62□□□□□ -0.07
CCDC40-202ENST00000374876 IGKV1-8A0A0C4DH67 115 aa14.61□□□□□ -0.07
CCDC40-202ENST00000374876 CLCA1A8K7I4 914 aa14.61□□□□□ -0.07
CCDC40-202ENST00000374876 PDZK1P1A8MUH7 402 aa14.61□□□□□ -0.07
CCDC40-202ENST00000374876 CD36P16671 472 aa14.61□□□□□ -0.07
CCDC40-202ENST00000374876 TRA2BP62995 288 aaKnown RBP14.61□□□□□ -0.07
CCDC40-202ENST00000374876 NR1D2Q14995 579 aa14.61□□□□□ -0.07
CCDC40-202ENST00000374876 COLEC12Q5KU26 742 aa14.61□□□□□ -0.07
CCDC40-202ENST00000374876 Q6ZNX1 250 aa14.61□□□□□ -0.07
CCDC40-202ENST00000374876 SZRD1Q7Z422 152 aa14.61□□□□□ -0.07
CCDC40-202ENST00000374876 GLRX5Q86SX6 157 aa14.61□□□□□ -0.07
CCDC40-202ENST00000374876 ARL14Q8N4G2 192 aa14.61□□□□□ -0.07
CCDC40-202ENST00000374876 DRAXINQ8NBI3 349 aaPredicted RBP14.61□□□□□ -0.07
CCDC40-202ENST00000374876 OR2A1Q8NGT9 310 aa14.61□□□□□ -0.07
CCDC40-202ENST00000374876 OR2L8Q8NGY9 312 aa14.61□□□□□ -0.07
CCDC40-202ENST00000374876 CREB3L4Q8TEY5 395 aa14.61□□□□□ -0.07
CCDC40-202ENST00000374876 TEFMQ96QE5 360 aaKnown RBP14.61□□□□□ -0.07
CCDC40-202ENST00000374876 ZNF607Q96SK3 696 aa14.61□□□□□ -0.07
CCDC40-202ENST00000374876 DPH7Q9BTV6 452 aa14.61□□□□□ -0.07
CCDC40-202ENST00000374876 ITPAQ9BY32 194 aa14.61□□□□□ -0.07
CCDC40-202ENST00000374876 SPTBN2O15020 2390 aa14.61□□□□□ -0.07
CCDC40-202ENST00000374876 A0A0A6YYD5 115 aa14.61□□□□□ -0.07
CCDC40-202ENST00000374876 A6NCN8 305 aa14.61□□□□□ -0.07
CCDC40-202ENST00000374876 LRIT2A6NDA9 550 aa14.61□□□□□ -0.07
CCDC40-202ENST00000374876 ARRDC5A6NEK1 342 aa14.61□□□□□ -0.07
CCDC40-202ENST00000374876 HMGN4O00479 90 aa14.61□□□□□ -0.07
CCDC40-202ENST00000374876 B4GALT2O60909 372 aa14.61□□□□□ -0.07
CCDC40-202ENST00000374876 MFN2O95140 757 aa14.61□□□□□ -0.07
CCDC40-202ENST00000374876 RECKO95980 971 aa14.61□□□□□ -0.07
CCDC40-202ENST00000374876 FTH1P19P0C7X4 201 aa14.61□□□□□ -0.07
CCDC40-202ENST00000374876 F3P13726 295 aa14.61□□□□□ -0.07
CCDC40-202ENST00000374876 DRD2P14416 443 aa14.61□□□□□ -0.07
CCDC40-202ENST00000374876 ZNF12P17014 697 aa14.61□□□□□ -0.07
CCDC40-202ENST00000374876 CBLP22681 906 aa14.61□□□□□ -0.07
CCDC40-202ENST00000374876 C21orf33P30042 268 aaPredicted RBP14.61□□□□□ -0.07
CCDC40-202ENST00000374876 PKLRP30613 574 aa14.61□□□□□ -0.07
CCDC40-202ENST00000374876 GPC1P35052 558 aa14.61□□□□□ -0.07
CCDC40-202ENST00000374876 OPRL1P41146 370 aa14.61□□□□□ -0.07
CCDC40-202ENST00000374876 RANBP1P43487 201 aa14.61□□□□□ -0.07
CCDC40-202ENST00000374876 SERPINB10P48595 397 aa14.61□□□□□ -0.07
CCDC40-202ENST00000374876 TEKQ02763 1124 aa14.61□□□□□ -0.07
CCDC40-202ENST00000374876 DGUOKQ16854 277 aa14.61□□□□□ -0.07
CCDC40-202ENST00000374876 C14orf28Q4W4Y0 310 aa14.61□□□□□ -0.07
CCDC40-202ENST00000374876 TMEM35AQ53FP2 167 aa14.61□□□□□ -0.07
CCDC40-202ENST00000374876 PERM1Q5SV97 790 aa14.61□□□□□ -0.07
CCDC40-202ENST00000374876 NDUFAF5Q5TEU4 345 aa14.61□□□□□ -0.07
CCDC40-202ENST00000374876 AMER3Q8N944 861 aa14.61□□□□□ -0.07
CCDC40-202ENST00000374876 SLC37A2Q8TED4 501 aa14.61□□□□□ -0.07
CCDC40-202ENST00000374876 MAPKAP1Q9BPZ7 522 aa14.61□□□□□ -0.07
CCDC40-202ENST00000374876 FAIM2Q9BWQ8 316 aa14.61□□□□□ -0.07
CCDC40-202ENST00000374876 MRPS30Q9NP92 439 aaKnown RBP14.61□□□□□ -0.07
CCDC40-202ENST00000374876 ZNF226Q9NYT6 803 aa14.61□□□□□ -0.07
CCDC40-202ENST00000374876 LRIT1Q9P2V4 623 aa14.61□□□□□ -0.07
CCDC40-202ENST00000374876 KCND3Q9UK17 655 aa14.61□□□□□ -0.07
CCDC40-202ENST00000374876 TMCC3Q9ULS5 477 aa14.61□□□□□ -0.07
CCDC40-202ENST00000374876 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.61□□□□□ -0.07
CCDC40-202ENST00000374876 CORINQ9Y5Q5 1042 aa14.61□□□□□ -0.07
CCDC40-202ENST00000374876 RP1P56715 2156 aa14.6□□□□□ -0.07
CCDC40-202ENST00000374876 OR52A4PA6NMU1 304 aa14.6□□□□□ -0.07
CCDC40-202ENST00000374876 PPM1DO15297 605 aa14.6□□□□□ -0.07
CCDC40-202ENST00000374876 SLC28A2O43868 658 aa14.6□□□□□ -0.07
CCDC40-202ENST00000374876 GASTP01350 101 aa14.6□□□□□ -0.07
CCDC40-202ENST00000374876 CDK1P06493 297 aa14.6□□□□□ -0.07
CCDC40-202ENST00000374876 FUT4P22083 530 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms