RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 IKZF5Q9H5V7 419 aa4.55□□□□□ -1.68
USP48-202ENST00000374730 KAT8Q9H7Z6 458 aaKnown RBP4.55□□□□□ -1.68
USP48-202ENST00000374730 RMND5AQ9H871 391 aa4.55□□□□□ -1.68
USP48-202ENST00000374730 SPHK2Q9NRA0 654 aa4.55□□□□□ -1.68
USP48-202ENST00000374730 TM7SF3Q9NS93 570 aa4.55□□□□□ -1.68
USP48-202ENST00000374730 FARSBQ9NSD9 589 aaKnown RBP4.55□□□□□ -1.68
USP48-202ENST00000374730 TRNAU1APQ9NX07 287 aaKnown RBP4.55□□□□□ -1.68
USP48-202ENST00000374730 SLC25A37Q9NYZ2 338 aa4.55□□□□□ -1.68
USP48-202ENST00000374730 RSL24D1Q9UHA3 163 aaKnown RBP4.55□□□□□ -1.68
USP48-202ENST00000374730 ERVW-1Q9UQF0 538 aa4.55□□□□□ -1.68
USP48-202ENST00000374730 CCL26Q9Y258 94 aa4.55□□□□□ -1.68
USP48-202ENST00000374730 DLGAP4Q9Y2H0 992 aa4.55□□□□□ -1.68
USP48-202ENST00000374730 PCDHGB2Q9Y5G2 931 aa4.55□□□□□ -1.68
USP48-202ENST00000374730 GMEB1Q9Y692 573 aa4.55□□□□□ -1.68
USP48-202ENST00000374730 AP1M2Q9Y6Q5 423 aa4.55□□□□□ -1.68
USP48-202ENST00000374730 NUP214P35658 2090 aaPredicted RBP4.55□□□□□ -1.68
USP48-202ENST00000374730 PRRC2BQ5JSZ5 2229 aaKnown RBP4.54□□□□□ -1.68
USP48-202ENST00000374730 SLC5A10A0PJK1 596 aa4.54□□□□□ -1.68
USP48-202ENST00000374730 CCDC160A6NGH7 325 aa4.54□□□□□ -1.68
USP48-202ENST00000374730 A8MVJ9 347 aa4.54□□□□□ -1.68
USP48-202ENST00000374730 ARHGEF33A8MVX0 844 aa4.54□□□□□ -1.68
USP48-202ENST00000374730 A8MX80 341 aa4.54□□□□□ -1.68
USP48-202ENST00000374730 NEDD8-MDP1E9PL57 170 aa4.54□□□□□ -1.68
USP48-202ENST00000374730 H0YIV9 168 aa4.54□□□□□ -1.68
USP48-202ENST00000374730 H3BSA7 217 aa4.54□□□□□ -1.68
USP48-202ENST00000374730 CXCR6O00574 342 aa4.54□□□□□ -1.68
USP48-202ENST00000374730 SLC9A3R1O14745 358 aaPredicted RBP4.54□□□□□ -1.68
USP48-202ENST00000374730 PER2O15055 1255 aa4.54□□□□□ -1.68
USP48-202ENST00000374730 CREG1O75629 220 aa4.54□□□□□ -1.68
USP48-202ENST00000374730 SNAP29O95721 258 aa4.54□□□□□ -1.68
USP48-202ENST00000374730 CPNE6O95741 557 aa4.54□□□□□ -1.68
USP48-202ENST00000374730 FGBP02675 491 aa4.54□□□□□ -1.68
USP48-202ENST00000374730 HNRNPA1P09651 372 aaKnown RBP eCLIP4.54□□□□□ -1.68
USP48-202ENST00000374730 THRBP10828 461 aa4.54□□□□□ -1.68
USP48-202ENST00000374730 CSF2RAP15509 400 aa4.54□□□□□ -1.68
USP48-202ENST00000374730 PTPN2P17706 415 aa4.54□□□□□ -1.68
USP48-202ENST00000374730 AMD1P17707 334 aa4.54□□□□□ -1.68
USP48-202ENST00000374730 POLR2EP19388 210 aaKnown RBP4.54□□□□□ -1.68
USP48-202ENST00000374730 PRPS1L1P21108 318 aa4.54□□□□□ -1.68
USP48-202ENST00000374730 ITGB8P26012 769 aa4.54□□□□□ -1.68
USP48-202ENST00000374730 SLC5A2P31639 672 aa4.54□□□□□ -1.68
USP48-202ENST00000374730 CA8P35219 290 aa4.54□□□□□ -1.68
USP48-202ENST00000374730 MMP12P39900 470 aa4.54□□□□□ -1.68
USP48-202ENST00000374730 HNF4AP41235 474 aa4.54□□□□□ -1.68
USP48-202ENST00000374730 MTHFRP42898 656 aa4.54□□□□□ -1.68
USP48-202ENST00000374730 MAGEA2P43356 314 aa4.54□□□□□ -1.68
USP48-202ENST00000374730 PRLHRP49683 370 aa4.54□□□□□ -1.68
USP48-202ENST00000374730 HLCSP50747 726 aa4.54□□□□□ -1.68
USP48-202ENST00000374730 CCR3P51677 355 aa4.54□□□□□ -1.68
USP48-202ENST00000374730 PGDP52209 483 aa4.54□□□□□ -1.68
USP48-202ENST00000374730 GABARAPL2P60520 117 aa4.54□□□□□ -1.68
USP48-202ENST00000374730 PFN3P60673 137 aa4.54□□□□□ -1.68
USP48-202ENST00000374730 RPS16P62249 146 aaKnown RBP4.54□□□□□ -1.68
USP48-202ENST00000374730 ESRRGP62508 458 aa4.54□□□□□ -1.68
USP48-202ENST00000374730 PPP2R2BQ00005 443 aa4.54□□□□□ -1.68
USP48-202ENST00000374730 SEMG2Q02383 582 aa4.54□□□□□ -1.68
USP48-202ENST00000374730 HSPA14Q0VDF9 509 aa4.54□□□□□ -1.68
USP48-202ENST00000374730 CHIT1Q13231 466 aa4.54□□□□□ -1.68
USP48-202ENST00000374730 IL18R1Q13478 541 aa4.54□□□□□ -1.68
USP48-202ENST00000374730 PON2Q15165 354 aa4.54□□□□□ -1.68
USP48-202ENST00000374730 TEAD2Q15562 447 aa4.54□□□□□ -1.68
USP48-202ENST00000374730 LRRC26Q2I0M4 334 aa4.54□□□□□ -1.68
USP48-202ENST00000374730 AAK1Q2M2I8 961 aa4.54□□□□□ -1.68
USP48-202ENST00000374730 ZNF284Q2VY69 593 aa4.54□□□□□ -1.68
USP48-202ENST00000374730 RFX4Q33E94 735 aa4.54□□□□□ -1.68
USP48-202ENST00000374730 BCL7AQ4VC05 210 aa4.54□□□□□ -1.68
USP48-202ENST00000374730 SGO1Q5FBB7 561 aa4.54□□□□□ -1.68
USP48-202ENST00000374730 WDR45BQ5MNZ6 344 aa4.54□□□□□ -1.68
USP48-202ENST00000374730 CCNYL2Q5T2Q4 361 aa4.54□□□□□ -1.68
USP48-202ENST00000374730 HENMT1Q5T8I9 393 aaKnown RBP4.54□□□□□ -1.68
USP48-202ENST00000374730 TTC23Q5W5X9 447 aa4.54□□□□□ -1.68
USP48-202ENST00000374730 FRG2Q64ET8 278 aa4.54□□□□□ -1.68
USP48-202ENST00000374730 TANGO2Q6ICL3 276 aa4.54□□□□□ -1.68
USP48-202ENST00000374730 GRHL2Q6ISB3 625 aa4.54□□□□□ -1.68
USP48-202ENST00000374730 ERICH5Q6P6B1 374 aa4.54□□□□□ -1.68
USP48-202ENST00000374730 TMEM65Q6PI78 240 aa4.54□□□□□ -1.68
USP48-202ENST00000374730 ZNF773Q6PK81 442 aa4.54□□□□□ -1.68
USP48-202ENST00000374730 DHRS4L2Q6PKH6 230 aa4.54□□□□□ -1.68
USP48-202ENST00000374730 ISLR2Q6UXK2 745 aa4.54□□□□□ -1.68
USP48-202ENST00000374730 DCDC5Q6ZRR9 648 aa4.54□□□□□ -1.68
USP48-202ENST00000374730 LPCAT2Q7L5N7 544 aa4.54□□□□□ -1.68
USP48-202ENST00000374730 HSD11B1LQ7Z5J1 315 aa4.54□□□□□ -1.68
USP48-202ENST00000374730 GPR141Q7Z602 305 aa4.54□□□□□ -1.68
USP48-202ENST00000374730 TECPR1Q7Z6L1 1165 aa4.54□□□□□ -1.68
USP48-202ENST00000374730 SERPINA11Q86U17 422 aa4.54□□□□□ -1.68
USP48-202ENST00000374730 GPR180Q86V85 440 aa4.54□□□□□ -1.68
USP48-202ENST00000374730 ERI1Q8IV48 349 aaKnown RBP4.54□□□□□ -1.68
USP48-202ENST00000374730 ADHFE1Q8IWW8 467 aa4.54□□□□□ -1.68
USP48-202ENST00000374730 NRSN1Q8IZ57 195 aa4.54□□□□□ -1.68
USP48-202ENST00000374730 EID3Q8N140 333 aa4.54□□□□□ -1.68
USP48-202ENST00000374730 ZNF786Q8N393 782 aa4.54□□□□□ -1.68
USP48-202ENST00000374730 ZCCHC7Q8N3Z6 543 aaKnown RBP4.54□□□□□ -1.68
USP48-202ENST00000374730 OR8J2Q8NGG1 315 aa4.54□□□□□ -1.68
USP48-202ENST00000374730 OR10A6Q8NH74 314 aa4.54□□□□□ -1.68
USP48-202ENST00000374730 C16orf52Q8NHV5 167 aa4.54□□□□□ -1.68
USP48-202ENST00000374730 ZNF420Q8TAQ5 688 aaPredicted RBP4.54□□□□□ -1.68
USP48-202ENST00000374730 OSR1Q8TAX0 266 aaPredicted RBP4.54□□□□□ -1.68
USP48-202ENST00000374730 WDR20Q8TBZ3 569 aa4.54□□□□□ -1.68
USP48-202ENST00000374730 MAGEE2Q8TD90 523 aaPredicted RBP4.54□□□□□ -1.68
USP48-202ENST00000374730 CYGBQ8WWM9 190 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms