RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 FCHO1O14526 889 aa10.52□□□□□ -0.73
HSPG2-202ENST00000374676 CFLARO15519 480 aa10.52□□□□□ -0.73
HSPG2-202ENST00000374676 MAN1A2O60476 641 aa10.52□□□□□ -0.73
HSPG2-202ENST00000374676 DPM1O60762 260 aa10.52□□□□□ -0.73
HSPG2-202ENST00000374676 ITGA10O75578 1167 aa10.52□□□□□ -0.73
HSPG2-202ENST00000374676 WDPCPO95876 746 aa10.52□□□□□ -0.73
HSPG2-202ENST00000374676 PDGFAP04085 211 aa10.52□□□□□ -0.73
HSPG2-202ENST00000374676 DRD5P21918 477 aa10.52□□□□□ -0.73
HSPG2-202ENST00000374676 ADSLP30566 484 aaPredicted RBP10.52□□□□□ -0.73
HSPG2-202ENST00000374676 CCT3P49368 545 aaKnown RBP10.52□□□□□ -0.73
HSPG2-202ENST00000374676 PSPHP78330 225 aa10.52□□□□□ -0.73
HSPG2-202ENST00000374676 PRR5P85299 388 aa10.52□□□□□ -0.73
HSPG2-202ENST00000374676 SF3A3Q12874 501 aaKnown RBP eCLIP10.52□□□□□ -0.73
HSPG2-202ENST00000374676 RCAN2Q14206 197 aa10.52□□□□□ -0.73
HSPG2-202ENST00000374676 AGKQ53H12 422 aa10.52□□□□□ -0.73
HSPG2-202ENST00000374676 LACTB2Q53H82 288 aaPredicted RBP10.52□□□□□ -0.73
HSPG2-202ENST00000374676 ZCCHC12Q6PEW1 402 aa10.52□□□□□ -0.73
HSPG2-202ENST00000374676 ASB18Q6ZVZ8 466 aa10.52□□□□□ -0.73
HSPG2-202ENST00000374676 BEST3Q8N1M1 668 aa10.52□□□□□ -0.73
HSPG2-202ENST00000374676 ZADH2Q8N4Q0 377 aa10.52□□□□□ -0.73
HSPG2-202ENST00000374676 NUP43Q8NFH3 380 aa10.52□□□□□ -0.73
HSPG2-202ENST00000374676 SFXN5Q8TD22 340 aa10.52□□□□□ -0.73
HSPG2-202ENST00000374676 THAP3Q8WTV1 239 aaPredicted RBP10.52□□□□□ -0.73
HSPG2-202ENST00000374676 TSPEARQ8WU66 669 aa10.52□□□□□ -0.73
HSPG2-202ENST00000374676 HOXB13Q92826 284 aaPredicted RBP10.52□□□□□ -0.73
HSPG2-202ENST00000374676 FAM120BQ96EK7 910 aaKnown RBP10.52□□□□□ -0.73
HSPG2-202ENST00000374676 HSPBAP1Q96EW2 488 aa10.52□□□□□ -0.73
HSPG2-202ENST00000374676 LCORQ96JN0 433 aaPredicted RBP10.52□□□□□ -0.73
HSPG2-202ENST00000374676 VSTM2LQ96N03 204 aa10.52□□□□□ -0.73
HSPG2-202ENST00000374676 FAM107BQ9H098 131 aa10.52□□□□□ -0.73
HSPG2-202ENST00000374676 CXorf36Q9H7Y0 433 aa10.52□□□□□ -0.73
HSPG2-202ENST00000374676 ANKRA2Q9H9E1 313 aa10.52□□□□□ -0.73
HSPG2-202ENST00000374676 LIN28AQ9H9Z2 209 aaKnown RBP10.52□□□□□ -0.73
HSPG2-202ENST00000374676 FOLH1BQ9HBA9 442 aa10.52□□□□□ -0.73
HSPG2-202ENST00000374676 SLC52A3Q9NQ40 469 aa10.52□□□□□ -0.73
HSPG2-202ENST00000374676 SAR1AQ9NR31 198 aa10.52□□□□□ -0.73
HSPG2-202ENST00000374676 DDX18Q9NVP1 670 aaKnown RBP10.52□□□□□ -0.73
HSPG2-202ENST00000374676 CCDC167Q9P0B6 97 aa10.52□□□□□ -0.73
HSPG2-202ENST00000374676 GPR55Q9Y2T6 319 aaPredicted RBP10.52□□□□□ -0.73
HSPG2-202ENST00000374676 EML6Q6ZMW3 1958 aa10.52□□□□□ -0.73
HSPG2-202ENST00000374676 NINQ8N4C6 2090 aa10.51□□□□□ -0.73
HSPG2-202ENST00000374676 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.51□□□□□ -0.73
HSPG2-202ENST00000374676 WWP2O00308 870 aa10.51□□□□□ -0.73
HSPG2-202ENST00000374676 TO15178 435 aa10.51□□□□□ -0.73
HSPG2-202ENST00000374676 ACOX3O15254 700 aa10.51□□□□□ -0.73
HSPG2-202ENST00000374676 OR2J2O76002 312 aa10.51□□□□□ -0.73
HSPG2-202ENST00000374676 SOX30O94993 753 aa10.51□□□□□ -0.73
HSPG2-202ENST00000374676 NADKO95544 446 aaPredicted RBP10.51□□□□□ -0.73
HSPG2-202ENST00000374676 CPSF4O95639 269 aaKnown RBP10.51□□□□□ -0.73
HSPG2-202ENST00000374676 UQCRC2P22695 453 aa10.51□□□□□ -0.73
HSPG2-202ENST00000374676 MAP3K8P41279 467 aa10.51□□□□□ -0.73
HSPG2-202ENST00000374676 TRPC1P48995 793 aa10.51□□□□□ -0.73
HSPG2-202ENST00000374676 HLCSP50747 726 aa10.51□□□□□ -0.73
HSPG2-202ENST00000374676 SSR4P51571 173 aa10.51□□□□□ -0.73
HSPG2-202ENST00000374676 KCNK10P57789 538 aa10.51□□□□□ -0.73
HSPG2-202ENST00000374676 LY6DQ14210 128 aa10.51□□□□□ -0.73
HSPG2-202ENST00000374676 MAPKAPK3Q16644 382 aa10.51□□□□□ -0.73
HSPG2-202ENST00000374676 TIGD2Q4W5G0 525 aa10.51□□□□□ -0.73
HSPG2-202ENST00000374676 BHLHB9Q6PI77 547 aa10.51□□□□□ -0.73
HSPG2-202ENST00000374676 OPN5Q6U736 354 aa10.51□□□□□ -0.73
HSPG2-202ENST00000374676 C16orf47Q6ZP98 133 aaPredicted RBP10.51□□□□□ -0.73
HSPG2-202ENST00000374676 ANKRD46Q86W74 232 aa10.51□□□□□ -0.73
HSPG2-202ENST00000374676 GPALPP1Q8IXQ4 340 aa10.51□□□□□ -0.73
HSPG2-202ENST00000374676 CLECL1Q8IZS7 167 aa10.51□□□□□ -0.73
HSPG2-202ENST00000374676 TAGAPQ8N103 731 aa10.51□□□□□ -0.73
HSPG2-202ENST00000374676 TMEM156Q8N614 296 aa10.51□□□□□ -0.73
HSPG2-202ENST00000374676 RBMXL3Q8N7X1 1067 aaKnown RBP10.51□□□□□ -0.73
HSPG2-202ENST00000374676 CDRT4Q8N9R6 151 aa10.51□□□□□ -0.73
HSPG2-202ENST00000374676 OR56A1Q8NGH5 318 aa10.51□□□□□ -0.73
HSPG2-202ENST00000374676 OR4A15Q8NGL6 344 aa10.51□□□□□ -0.73
HSPG2-202ENST00000374676 SLC22A8Q8TCC7 542 aa10.51□□□□□ -0.73
HSPG2-202ENST00000374676 VPS33AQ96AX1 596 aa10.51□□□□□ -0.73
HSPG2-202ENST00000374676 SPDL1Q96EA4 605 aa10.51□□□□□ -0.73
HSPG2-202ENST00000374676 GIMAP5Q96F15 307 aa10.51□□□□□ -0.73
HSPG2-202ENST00000374676 ITCHQ96J02 903 aa10.51□□□□□ -0.73
HSPG2-202ENST00000374676 MAGED4Q96JG8 741 aa10.51□□□□□ -0.73
HSPG2-202ENST00000374676 BTBD9Q96Q07 612 aa10.51□□□□□ -0.73
HSPG2-202ENST00000374676 PHF12Q96QT6 1004 aa10.51□□□□□ -0.73
HSPG2-202ENST00000374676 GAL3ST4Q96RP7 486 aa10.51□□□□□ -0.73
HSPG2-202ENST00000374676 RASL10BQ96S79 203 aa10.51□□□□□ -0.73
HSPG2-202ENST00000374676 CCT8L2Q96SF2 557 aa10.51□□□□□ -0.73
HSPG2-202ENST00000374676 UTP23Q9BRU9 249 aaKnown RBP10.51□□□□□ -0.73
HSPG2-202ENST00000374676 LMF2Q9BU23 707 aaKnown RBP10.51□□□□□ -0.73
HSPG2-202ENST00000374676 ITPAQ9BY32 194 aa10.51□□□□□ -0.73
HSPG2-202ENST00000374676 RMND5AQ9H871 391 aa10.51□□□□□ -0.73
HSPG2-202ENST00000374676 SERHLQ9NQF3 203 aa10.51□□□□□ -0.73
HSPG2-202ENST00000374676 ZNF71Q9NQZ8 489 aaPredicted RBP10.51□□□□□ -0.73
HSPG2-202ENST00000374676 ZCCHC3Q9NUD5 404 aaKnown RBP10.51□□□□□ -0.73
HSPG2-202ENST00000374676 PLA2G3Q9NZ20 509 aa10.51□□□□□ -0.73
HSPG2-202ENST00000374676 DTX4Q9Y2E6 619 aa10.51□□□□□ -0.73
HSPG2-202ENST00000374676 EXPH5Q8NEV8 1989 aa10.51□□□□□ -0.73
HSPG2-202ENST00000374676 A0A1W2PP18 115 aa10.5□□□□□ -0.73
HSPG2-202ENST00000374676 OR5H15A6NDH6 313 aa10.5□□□□□ -0.73
HSPG2-202ENST00000374676 FRG2CA6NGY1 282 aa10.5□□□□□ -0.73
HSPG2-202ENST00000374676 CCDC154A6NI56 674 aa10.5□□□□□ -0.73
HSPG2-202ENST00000374676 SLC22A2O15244 555 aa10.5□□□□□ -0.73
HSPG2-202ENST00000374676 ZNF354AO60765 605 aaPredicted RBP10.5□□□□□ -0.73
HSPG2-202ENST00000374676 CCDC22O60826 627 aa10.5□□□□□ -0.73
HSPG2-202ENST00000374676 ERN1O75460 977 aaKnown RBP10.5□□□□□ -0.73
HSPG2-202ENST00000374676 FAM107AO95990 144 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms