RNA–Protein interactions for RNA: ENST00000372733.3

SDC4-201, Transcript of syndecan 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC4, Length 2,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4-201ENST00000372733 TMPRSS11DO60235 418 aa15.45■□□□□ 0.06
SDC4-201ENST00000372733 METAP1P53582 386 aa15.45■□□□□ 0.06
SDC4-201ENST00000372733 LHX8Q68G74 356 aa15.45■□□□□ 0.06
SDC4-201ENST00000372733 TIGD3Q6B0B8 471 aa15.45■□□□□ 0.06
SDC4-201ENST00000372733 PLCZ1Q86YW0 608 aa15.45■□□□□ 0.06
SDC4-201ENST00000372733 SLC35G5Q96KT7 338 aa15.45■□□□□ 0.06
SDC4-201ENST00000372733 TMEM43Q9BTV4 400 aa15.45■□□□□ 0.06
SDC4-201ENST00000372733 SAP130Q9H0E3 1048 aa15.45■□□□□ 0.06
SDC4-201ENST00000372733 CUEDC1Q9NWM3 386 aaPredicted RBP15.45■□□□□ 0.06
SDC4-201ENST00000372733 CLCA2Q9UQC9 943 aa15.45■□□□□ 0.06
SDC4-201ENST00000372733 PRKAB1Q9Y478 270 aa15.45■□□□□ 0.06
SDC4-201ENST00000372733 HSPB11Q9Y547 144 aa15.45■□□□□ 0.06
SDC4-201ENST00000372733 MTCL1Q9Y4B5 1905 aaKnown RBP15.45■□□□□ 0.06
SDC4-201ENST00000372733 TSPAN11A1L157 253 aa15.44■□□□□ 0.06
SDC4-201ENST00000372733 C12orf71A8MTZ7 269 aa15.44■□□□□ 0.06
SDC4-201ENST00000372733 UBXN7O94888 489 aa15.44■□□□□ 0.06
SDC4-201ENST00000372733 TYRP14679 529 aa15.44■□□□□ 0.06
SDC4-201ENST00000372733 ARSBP15848 533 aa15.44■□□□□ 0.06
SDC4-201ENST00000372733 WEE1P30291 646 aa15.44■□□□□ 0.06
SDC4-201ENST00000372733 FGF9P31371 208 aaPredicted RBP15.44■□□□□ 0.06
SDC4-201ENST00000372733 EVI2BP34910 448 aa15.44■□□□□ 0.06
SDC4-201ENST00000372733 UBE3AQ05086 875 aa15.44■□□□□ 0.06
SDC4-201ENST00000372733 TNK1Q13470 666 aa15.44■□□□□ 0.06
SDC4-201ENST00000372733 ZNF791Q3KP31 576 aaPredicted RBP15.44■□□□□ 0.06
SDC4-201ENST00000372733 MINDY4Q4G0A6 757 aa15.44■□□□□ 0.06
SDC4-201ENST00000372733 LAMTOR1Q6IAA8 161 aa15.44■□□□□ 0.06
SDC4-201ENST00000372733 C1orf94Q6P1W5 598 aa15.44■□□□□ 0.06
SDC4-201ENST00000372733 CD200R1LQ6Q8B3 271 aa15.44■□□□□ 0.06
SDC4-201ENST00000372733 B3GLCTQ6Y288 498 aa15.44■□□□□ 0.06
SDC4-201ENST00000372733 RFPL4BQ6ZWI9 263 aa15.44■□□□□ 0.06
SDC4-201ENST00000372733 PARS2Q7L3T8 475 aaKnown RBP15.44■□□□□ 0.06
SDC4-201ENST00000372733 KRT78Q8N1N4 520 aa15.44■□□□□ 0.06
SDC4-201ENST00000372733 DUSP18Q8NEJ0 188 aa15.44■□□□□ 0.06
SDC4-201ENST00000372733 OR4F15Q8NGB8 312 aa15.44■□□□□ 0.06
SDC4-201ENST00000372733 OR5AR1Q8NGP9 310 aa15.44■□□□□ 0.06
SDC4-201ENST00000372733 OR5H6Q8NGV6 325 aa15.44■□□□□ 0.06
SDC4-201ENST00000372733 TEX47Q8TBZ9 253 aa15.44■□□□□ 0.06
SDC4-201ENST00000372733 ZNF558Q96NG5 402 aa15.44■□□□□ 0.06
SDC4-201ENST00000372733 ARHGAP9Q9BRR9 750 aa15.44■□□□□ 0.06
SDC4-201ENST00000372733 YIPF4Q9BSR8 244 aa15.44■□□□□ 0.06
SDC4-201ENST00000372733 MS4A8Q9BY19 250 aa15.44■□□□□ 0.06
SDC4-201ENST00000372733 LHX9Q9NQ69 397 aa15.44■□□□□ 0.06
SDC4-201ENST00000372733 AHSPQ9NZD4 102 aa15.44■□□□□ 0.06
SDC4-201ENST00000372733 CNIH4Q9P003 139 aa15.44■□□□□ 0.06
SDC4-201ENST00000372733 IL36AQ9UHA7 158 aa15.44■□□□□ 0.06
SDC4-201ENST00000372733 TAC3Q9UHF0 121 aa15.44■□□□□ 0.06
SDC4-201ENST00000372733 C2orf92A0A1B0GVN3 265 aa15.44■□□□□ 0.06
SDC4-201ENST00000372733 FEZF1A0PJY2 475 aa15.44■□□□□ 0.06
SDC4-201ENST00000372733 WASHC1A8K0Z3 465 aa15.44■□□□□ 0.06
SDC4-201ENST00000372733 DVL2O14641 736 aa15.44■□□□□ 0.06
SDC4-201ENST00000372733 OR2B3O76000 313 aa15.44■□□□□ 0.06
SDC4-201ENST00000372733 CH25HO95992 272 aa15.44■□□□□ 0.06
SDC4-201ENST00000372733 BUD31P41223 144 aaPredicted RBP15.44■□□□□ 0.06
SDC4-201ENST00000372733 EVX1P49640 407 aa15.44■□□□□ 0.06
SDC4-201ENST00000372733 CTBP2P56545 445 aa15.44■□□□□ 0.06
SDC4-201ENST00000372733 RRAS2P62070 204 aaPredicted RBP15.44■□□□□ 0.06
SDC4-201ENST00000372733 ABATP80404 500 aa15.44■□□□□ 0.06
SDC4-201ENST00000372733 DUSP6Q16828 381 aa15.44■□□□□ 0.06
SDC4-201ENST00000372733 ZNF805Q5CZA5 627 aa15.44■□□□□ 0.06
SDC4-201ENST00000372733 ENTPD8Q5MY95 495 aa15.44■□□□□ 0.06
SDC4-201ENST00000372733 KIAA1211LQ6NV74 962 aa15.44■□□□□ 0.06
SDC4-201ENST00000372733 WASH2PQ6VEQ5 465 aa15.44■□□□□ 0.06
SDC4-201ENST00000372733 FAM83HQ6ZRV2 1179 aaPredicted RBP15.44■□□□□ 0.06
SDC4-201ENST00000372733 ZNF547Q8IVP9 402 aa15.44■□□□□ 0.06
SDC4-201ENST00000372733 AMER3Q8N944 861 aa15.44■□□□□ 0.06
SDC4-201ENST00000372733 ZNF485Q8NCK3 441 aa15.44■□□□□ 0.06
SDC4-201ENST00000372733 ANKK1Q8NFD2 765 aa15.44■□□□□ 0.06
SDC4-201ENST00000372733 RAET1EQ8TD07 263 aa15.44■□□□□ 0.06
SDC4-201ENST00000372733 WACQ9BTA9 647 aa15.44■□□□□ 0.06
SDC4-201ENST00000372733 RNF32Q9H0A6 362 aa15.44■□□□□ 0.06
SDC4-201ENST00000372733 QRSL1Q9H0R6 528 aaKnown RBP15.44■□□□□ 0.06
SDC4-201ENST00000372733 MRPS18AQ9NVS2 196 aaKnown RBP15.44■□□□□ 0.06
SDC4-201ENST00000372733 DKK3Q9UBP4 350 aa15.44■□□□□ 0.06
SDC4-201ENST00000372733 ASF1AQ9Y294 204 aa15.44■□□□□ 0.06
SDC4-201ENST00000372733 SLC9A8Q9Y2E8 581 aa15.44■□□□□ 0.06
SDC4-201ENST00000372733 EXOSC1Q9Y3B2 195 aaKnown RBP15.44■□□□□ 0.06
SDC4-201ENST00000372733 PCDHGB7Q9Y5F8 929 aa15.44■□□□□ 0.06
SDC4-201ENST00000372733 DENND4CQ5VZ89 1909 aa15.43■□□□□ 0.06
SDC4-201ENST00000372733 TRDV1A0A1B0GX56 115 aa15.43■□□□□ 0.06
SDC4-201ENST00000372733 CD8B2A6NJW9 211 aa15.43■□□□□ 0.06
SDC4-201ENST00000372733 PI15O43692 258 aa15.43■□□□□ 0.06
SDC4-201ENST00000372733 PQBP1O60828 265 aaKnown RBP15.43■□□□□ 0.06
SDC4-201ENST00000372733 TRIM3O75382 744 aaPredicted RBP15.43■□□□□ 0.06
SDC4-201ENST00000372733 CRYZL1O95825 349 aa15.43■□□□□ 0.06
SDC4-201ENST00000372733 CD8BP10966 210 aa15.43■□□□□ 0.06
SDC4-201ENST00000372733 IFI30P13284 250 aa15.43■□□□□ 0.06
SDC4-201ENST00000372733 SLC1A3P43003 542 aa15.43■□□□□ 0.06
SDC4-201ENST00000372733 MLLT1Q03111 559 aaPredicted RBP15.43■□□□□ 0.06
SDC4-201ENST00000372733 C19orf57Q0VDD7 668 aa15.43■□□□□ 0.06
SDC4-201ENST00000372733 CCDC85BQ15834 202 aaPredicted RBP15.43■□□□□ 0.06
SDC4-201ENST00000372733 SLC27A4Q6P1M0 643 aa15.43■□□□□ 0.06
SDC4-201ENST00000372733 NEIL3Q8TAT5 605 aa15.43■□□□□ 0.06
SDC4-201ENST00000372733 MRGPRX3Q96LB0 322 aa15.43■□□□□ 0.06
SDC4-201ENST00000372733 PRRC1Q96M27 445 aa15.43■□□□□ 0.06
SDC4-201ENST00000372733 QRFPRQ96P65 431 aa15.43■□□□□ 0.06
SDC4-201ENST00000372733 ZDHHC5Q9C0B5 715 aa15.43■□□□□ 0.06
SDC4-201ENST00000372733 ING3Q9NXR8 418 aa15.43■□□□□ 0.06
SDC4-201ENST00000372733 CACNB4O00305 520 aaPredicted RBP15.43■□□□□ 0.06
SDC4-201ENST00000372733 GABRPO00591 440 aa15.43■□□□□ 0.06
SDC4-201ENST00000372733 TPD52L2O43399 206 aaKnown RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms