RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 EBF4Q9BQW3 602 aa13.71□□□□□ -0.21
COL9A1-204ENST00000370496 HES7Q9BYE0 225 aa13.71□□□□□ -0.21
COL9A1-204ENST00000370496 FOLH1BQ9HBA9 442 aa13.71□□□□□ -0.21
COL9A1-204ENST00000370496 TIMMDC1Q9NPL8 285 aa13.71□□□□□ -0.21
COL9A1-204ENST00000370496 CFAP46Q8IYW2 2715 aa13.71□□□□□ -0.22
COL9A1-204ENST00000370496 PLOD2O00469 737 aa13.71□□□□□ -0.22
COL9A1-204ENST00000370496 ANKRD28O15084 1053 aa13.71□□□□□ -0.22
COL9A1-204ENST00000370496 ERN1O75460 977 aaKnown RBP13.71□□□□□ -0.22
COL9A1-204ENST00000370496 NADKO95544 446 aaPredicted RBP13.71□□□□□ -0.22
COL9A1-204ENST00000370496 ABCB1P08183 1280 aaPredicted RBP13.71□□□□□ -0.22
COL9A1-204ENST00000370496 VIMP08670 466 aaKnown RBP13.71□□□□□ -0.22
COL9A1-204ENST00000370496 IFI6P09912 130 aa13.71□□□□□ -0.22
COL9A1-204ENST00000370496 TROVE2P10155 538 aaKnown RBP eCLIP13.71□□□□□ -0.22
COL9A1-204ENST00000370496 SOAT1P35610 550 aa13.71□□□□□ -0.22
COL9A1-204ENST00000370496 IDH3AP50213 366 aa13.71□□□□□ -0.22
COL9A1-204ENST00000370496 MLLT10P55197 1068 aa13.71□□□□□ -0.22
COL9A1-204ENST00000370496 DCAF7P61962 342 aa13.71□□□□□ -0.22
COL9A1-204ENST00000370496 PRR5P85299 388 aa13.71□□□□□ -0.22
COL9A1-204ENST00000370496 TLE1Q04724 770 aa13.71□□□□□ -0.22
COL9A1-204ENST00000370496 PLCXD2Q0VAA5 305 aa13.71□□□□□ -0.22
COL9A1-204ENST00000370496 ZNHIT3Q15649 155 aaPredicted RBP13.71□□□□□ -0.22
COL9A1-204ENST00000370496 MAPKAPK3Q16644 382 aa13.71□□□□□ -0.22
COL9A1-204ENST00000370496 GSTA3Q16772 222 aa13.71□□□□□ -0.22
COL9A1-204ENST00000370496 FAM174BQ3ZCQ3 159 aa13.71□□□□□ -0.22
COL9A1-204ENST00000370496 SPDYE7PQ495Y7 208 aa13.71□□□□□ -0.22
COL9A1-204ENST00000370496 PDCD4Q53EL6 469 aaKnown RBP13.71□□□□□ -0.22
COL9A1-204ENST00000370496 OR4F3Q6IEY1 312 aa13.71□□□□□ -0.22
COL9A1-204ENST00000370496 RTL4Q6ZR62 310 aa13.71□□□□□ -0.22
COL9A1-204ENST00000370496 ZNF605Q86T29 641 aa13.71□□□□□ -0.22
COL9A1-204ENST00000370496 DND1Q8IYX4 353 aaKnown RBP13.71□□□□□ -0.22
COL9A1-204ENST00000370496 PRR22Q8IZ63 422 aa13.71□□□□□ -0.22
COL9A1-204ENST00000370496 FAM98AQ8NCA5 519 aaKnown RBP13.71□□□□□ -0.22
COL9A1-204ENST00000370496 FAM13CQ8NE31 585 aa13.71□□□□□ -0.22
COL9A1-204ENST00000370496 CPT1CQ8TCG5 803 aa13.71□□□□□ -0.22
COL9A1-204ENST00000370496 ADIPOR1Q96A54 375 aa13.71□□□□□ -0.22
COL9A1-204ENST00000370496 TP53INP1Q96A56 240 aa13.71□□□□□ -0.22
COL9A1-204ENST00000370496 TESCQ96BS2 214 aa13.71□□□□□ -0.22
COL9A1-204ENST00000370496 COQ8BQ96D53 544 aa13.71□□□□□ -0.22
COL9A1-204ENST00000370496 SPACA9Q96E40 222 aaPredicted RBP13.71□□□□□ -0.22
COL9A1-204ENST00000370496 LCORQ96JN0 433 aaPredicted RBP13.71□□□□□ -0.22
COL9A1-204ENST00000370496 MS4A4EQ96PG1 132 aa13.71□□□□□ -0.22
COL9A1-204ENST00000370496 SIKE1Q9BRV8 207 aa13.71□□□□□ -0.22
COL9A1-204ENST00000370496 NXF5Q9H1B4 397 aaKnown RBP13.71□□□□□ -0.22
COL9A1-204ENST00000370496 CLMPQ9H6B4 373 aa13.71□□□□□ -0.22
COL9A1-204ENST00000370496 TRIM45Q9H8W5 580 aaPredicted RBP13.71□□□□□ -0.22
COL9A1-204ENST00000370496 C3orf14Q9HBI5 128 aa13.71□□□□□ -0.22
COL9A1-204ENST00000370496 EQTNQ9NQ60 294 aa13.71□□□□□ -0.22
COL9A1-204ENST00000370496 RYDENQ9NUL5 291 aaKnown RBP13.71□□□□□ -0.22
COL9A1-204ENST00000370496 FGFR1OP2Q9NVK5 253 aa13.71□□□□□ -0.22
COL9A1-204ENST00000370496 DCTN4Q9UJW0 460 aa13.71□□□□□ -0.22
COL9A1-204ENST00000370496 C19orf53Q9UNZ5 99 aaPredicted RBP13.71□□□□□ -0.22
COL9A1-204ENST00000370496 KLF13Q9Y2Y9 288 aaPredicted RBP13.71□□□□□ -0.22
COL9A1-204ENST00000370496 SNX8Q9Y5X2 465 aa13.71□□□□□ -0.22
COL9A1-204ENST00000370496 GPR45Q9Y5Y3 372 aa13.71□□□□□ -0.22
COL9A1-204ENST00000370496 FRG2CA6NGY1 282 aa13.7□□□□□ -0.22
COL9A1-204ENST00000370496 CAPN14A8MX76 684 aa13.7□□□□□ -0.22
COL9A1-204ENST00000370496 C9JVG2 144 aa13.7□□□□□ -0.22
COL9A1-204ENST00000370496 UPK1AO00322 258 aa13.7□□□□□ -0.22
COL9A1-204ENST00000370496 ACOX3O15254 700 aa13.7□□□□□ -0.22
COL9A1-204ENST00000370496 NME2P1O60361 137 aa13.7□□□□□ -0.22
COL9A1-204ENST00000370496 ZNF354AO60765 605 aaPredicted RBP13.7□□□□□ -0.22
COL9A1-204ENST00000370496 NME6O75414 186 aaPredicted RBP13.7□□□□□ -0.22
COL9A1-204ENST00000370496 C6orf47O95873 294 aa13.7□□□□□ -0.22
COL9A1-204ENST00000370496 SP1P08047 785 aa13.7□□□□□ -0.22
COL9A1-204ENST00000370496 NME2P22392 152 aa13.7□□□□□ -0.22
COL9A1-204ENST00000370496 S100A3P33764 101 aa13.7□□□□□ -0.22
COL9A1-204ENST00000370496 MDH1P40925 334 aaKnown RBP13.7□□□□□ -0.22
COL9A1-204ENST00000370496 UFM1P61960 85 aa13.7□□□□□ -0.22
COL9A1-204ENST00000370496 SRSF11Q05519 484 aaKnown RBP13.7□□□□□ -0.22
COL9A1-204ENST00000370496 MLC1Q15049 377 aa13.7□□□□□ -0.22
COL9A1-204ENST00000370496 SPANXN4Q5MJ08 99 aa13.7□□□□□ -0.22
COL9A1-204ENST00000370496 GALNTL5Q7Z4T8 443 aa13.7□□□□□ -0.22
COL9A1-204ENST00000370496 MIER2Q8N344 545 aa13.7□□□□□ -0.22
COL9A1-204ENST00000370496 CISD2Q8N5K1 135 aaKnown RBP13.7□□□□□ -0.22
COL9A1-204ENST00000370496 PSD4Q8NDX1 1056 aa13.7□□□□□ -0.22
COL9A1-204ENST00000370496 OR8J2Q8NGG1 315 aa13.7□□□□□ -0.22
COL9A1-204ENST00000370496 OR5P2Q8WZ92 322 aa13.7□□□□□ -0.22
COL9A1-204ENST00000370496 SCMH1Q96GD3 660 aa13.7□□□□□ -0.22
COL9A1-204ENST00000370496 VSTM2LQ96N03 204 aa13.7□□□□□ -0.22
COL9A1-204ENST00000370496 BTBD9Q96Q07 612 aa13.7□□□□□ -0.22
COL9A1-204ENST00000370496 CCDC28BQ9BUN5 200 aa13.7□□□□□ -0.22
COL9A1-204ENST00000370496 TRIM4Q9C037 500 aa13.7□□□□□ -0.22
COL9A1-204ENST00000370496 ZCCHC3Q9NUD5 404 aaKnown RBP13.7□□□□□ -0.22
COL9A1-204ENST00000370496 PCDHGB6Q9Y5F9 930 aa13.7□□□□□ -0.22
COL9A1-204ENST00000370496 A0A0G2JND7 137 aa13.69□□□□□ -0.22
COL9A1-204ENST00000370496 EMC8O43402 210 aa13.69□□□□□ -0.22
COL9A1-204ENST00000370496 RASAL1O95294 804 aa13.69□□□□□ -0.22
COL9A1-204ENST00000370496 PSMG1O95456 288 aa13.69□□□□□ -0.22
COL9A1-204ENST00000370496 FBXO45P0C2W1 286 aa13.69□□□□□ -0.22
COL9A1-204ENST00000370496 ABCD3P28288 659 aa13.69□□□□□ -0.22
COL9A1-204ENST00000370496 PPICP45877 212 aa13.69□□□□□ -0.22
COL9A1-204ENST00000370496 PRKAG1P54619 331 aa13.69□□□□□ -0.22
COL9A1-204ENST00000370496 CORO7P57737 925 aa13.69□□□□□ -0.22
COL9A1-204ENST00000370496 PSPHP78330 225 aa13.69□□□□□ -0.22
COL9A1-204ENST00000370496 INPP5JQ15735 1006 aaPredicted RBP13.69□□□□□ -0.22
COL9A1-204ENST00000370496 ANXA8L1Q5VT79 327 aa13.69□□□□□ -0.22
COL9A1-204ENST00000370496 SLC25A25Q6KCM7 469 aa13.69□□□□□ -0.22
COL9A1-204ENST00000370496 RPUSD3Q6P087 351 aaKnown RBP13.69□□□□□ -0.22
COL9A1-204ENST00000370496 TMEM64Q6YI46 380 aa13.69□□□□□ -0.22
COL9A1-204ENST00000370496 MDGA2Q7Z553 956 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms