RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 GABARAPL2P60520 117 aa11.9□□□□□ -0.5
HCFC1-202ENST00000369984 ACTBP60709 375 aa11.9□□□□□ -0.5
HCFC1-202ENST00000369984 ACTG1P63261 375 aa11.9□□□□□ -0.5
HCFC1-202ENST00000369984 NPRL3Q12980 569 aa11.9□□□□□ -0.5
HCFC1-202ENST00000369984 MS4A13Q5J8X5 152 aa11.9□□□□□ -0.5
HCFC1-202ENST00000369984 GPR149Q86SP6 731 aa11.9□□□□□ -0.5
HCFC1-202ENST00000369984 RCBTB1Q8NDN9 531 aa11.9□□□□□ -0.5
HCFC1-202ENST00000369984 C3orf49Q96BT1 292 aa11.9□□□□□ -0.5
HCFC1-202ENST00000369984 HYLS1Q96M11 299 aa11.9□□□□□ -0.5
HCFC1-202ENST00000369984 PRTFDC1Q9NRG1 225 aa11.9□□□□□ -0.5
HCFC1-202ENST00000369984 ANKRD34BA5PLL1 514 aa11.9□□□□□ -0.5
HCFC1-202ENST00000369984 SPDEFO95238 335 aa11.9□□□□□ -0.5
HCFC1-202ENST00000369984 GCGRP47871 477 aa11.9□□□□□ -0.5
HCFC1-202ENST00000369984 KCNQ1P51787 676 aa11.9□□□□□ -0.5
HCFC1-202ENST00000369984 NIPAL3Q6P499 406 aa11.9□□□□□ -0.5
HCFC1-202ENST00000369984 ALDH16A1Q8IZ83 802 aa11.9□□□□□ -0.5
HCFC1-202ENST00000369984 THAP3Q8WTV1 239 aaPredicted RBP11.9□□□□□ -0.5
HCFC1-202ENST00000369984 MYRFLQ96LU7 910 aa11.9□□□□□ -0.5
HCFC1-202ENST00000369984 MAGIXQ9H6Y5 334 aa11.9□□□□□ -0.5
HCFC1-202ENST00000369984 ZBTB20Q9HC78 741 aaPredicted RBP11.9□□□□□ -0.5
HCFC1-202ENST00000369984 TMEM248Q9NWD8 314 aa11.9□□□□□ -0.5
HCFC1-202ENST00000369984 FOXK1P85037 733 aa11.9□□□□□ -0.5
HCFC1-202ENST00000369984 CDK3Q00526 305 aa11.9□□□□□ -0.5
HCFC1-202ENST00000369984 ARHGAP11AQ6P4F7 1023 aa11.9□□□□□ -0.5
HCFC1-202ENST00000369984 HMGN2P46Q86SG4 172 aa11.9□□□□□ -0.5
HCFC1-202ENST00000369984 FBXL18Q96ME1 805 aa11.9□□□□□ -0.5
HCFC1-202ENST00000369984 CNTNAP3BQ96NU0 1288 aa11.9□□□□□ -0.5
HCFC1-202ENST00000369984 SEMA6CQ9H3T2 930 aa11.9□□□□□ -0.5
HCFC1-202ENST00000369984 ADAMTS6Q9UKP5 1117 aa11.9□□□□□ -0.5
HCFC1-202ENST00000369984 PCDHB3Q9Y5E6 796 aa11.9□□□□□ -0.5
HCFC1-202ENST00000369984 ARVCFO00192 962 aa11.9□□□□□ -0.5
HCFC1-202ENST00000369984 RTCAO00442 366 aaKnown RBP11.9□□□□□ -0.5
HCFC1-202ENST00000369984 STSP08842 583 aa11.9□□□□□ -0.5
HCFC1-202ENST00000369984 ADORA3P0DMS8 318 aa11.9□□□□□ -0.5
HCFC1-202ENST00000369984 RUNX2Q13950 521 aa11.9□□□□□ -0.5
HCFC1-202ENST00000369984 SLC18B1Q6NT16 456 aa11.9□□□□□ -0.5
HCFC1-202ENST00000369984 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.9□□□□□ -0.52e-7■■□□□ 13.5
HCFC1-202ENST00000369984 A0A0D9SEW6 157 aa11.9□□□□□ -0.5
HCFC1-202ENST00000369984 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.9□□□□□ -0.5
HCFC1-202ENST00000369984 CBY3A6NI87 242 aa11.9□□□□□ -0.5
HCFC1-202ENST00000369984 SOBPA7XYQ1 873 aa11.9□□□□□ -0.5
HCFC1-202ENST00000369984 AKR1C2P52895 323 aa11.9□□□□□ -0.5
HCFC1-202ENST00000369984 HNRNPKP61978 463 aaKnown RBP eCLIP11.9□□□□□ -0.51e-8■■■■■ 28.3
HCFC1-202ENST00000369984 CMTM8Q8IZV2 173 aa11.9□□□□□ -0.5
HCFC1-202ENST00000369984 OR52E2Q8NGJ4 325 aa11.9□□□□□ -0.5
HCFC1-202ENST00000369984 UBXN10Q96LJ8 280 aa11.9□□□□□ -0.5
HCFC1-202ENST00000369984 MGLLQ99685 303 aa11.9□□□□□ -0.5
HCFC1-202ENST00000369984 SRA1Q9HD15 236 aaKnown RBP11.9□□□□□ -0.5
HCFC1-202ENST00000369984 HIF1ANQ9NWT6 349 aa11.9□□□□□ -0.5
HCFC1-202ENST00000369984 ATXN7L1Q9ULK2 861 aaPredicted RBP11.9□□□□□ -0.5
HCFC1-202ENST00000369984 NWD2Q9ULI1 1742 aa11.9□□□□□ -0.5
HCFC1-202ENST00000369984 SNRNP200O75643 2136 aaKnown RBP11.9□□□□□ -0.51
HCFC1-202ENST00000369984 ASGR2P07307 311 aa11.9□□□□□ -0.51
HCFC1-202ENST00000369984 C7P10643 843 aa11.9□□□□□ -0.51
HCFC1-202ENST00000369984 POLR2CP19387 275 aaPredicted RBP11.9□□□□□ -0.51
HCFC1-202ENST00000369984 ACRV1P26436 265 aa11.9□□□□□ -0.51
HCFC1-202ENST00000369984 PRMT2P55345 433 aa11.9□□□□□ -0.51
HCFC1-202ENST00000369984 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.9□□□□□ -0.51
HCFC1-202ENST00000369984 ZNF705AQ6ZN79 300 aaPredicted RBP11.9□□□□□ -0.51
HCFC1-202ENST00000369984 DRAXINQ8NBI3 349 aaPredicted RBP11.9□□□□□ -0.51
HCFC1-202ENST00000369984 SPRYD4Q8WW59 207 aaPredicted RBP11.9□□□□□ -0.51
HCFC1-202ENST00000369984 POPDC3Q9HBV1 291 aa11.9□□□□□ -0.51
HCFC1-202ENST00000369984 C17orf113A0A1B0GUU1 675 aa11.89□□□□□ -0.51
HCFC1-202ENST00000369984 SLC22A31A6NKX4 558 aa11.89□□□□□ -0.51
HCFC1-202ENST00000369984 FOXD2O60548 495 aaPredicted RBP11.89□□□□□ -0.51
HCFC1-202ENST00000369984 HOXB2P14652 356 aa11.89□□□□□ -0.51
HCFC1-202ENST00000369984 AQP2P41181 271 aa11.89□□□□□ -0.51
HCFC1-202ENST00000369984 LBX2Q6XYB7 198 aa11.89□□□□□ -0.51
HCFC1-202ENST00000369984 ARL11Q969Q4 196 aa11.89□□□□□ -0.51
HCFC1-202ENST00000369984 SAMD11Q96NU1 681 aa11.89□□□□□ -0.51
HCFC1-202ENST00000369984 SACM1LQ9NTJ5 587 aa11.89□□□□□ -0.51
HCFC1-202ENST00000369984 GIMAP2Q9UG22 337 aa11.89□□□□□ -0.51
HCFC1-202ENST00000369984 A6NLC8 198 aa11.89□□□□□ -0.51
HCFC1-202ENST00000369984 E9PI62 339 aa11.89□□□□□ -0.51
HCFC1-202ENST00000369984 SOCS5O75159 536 aa11.89□□□□□ -0.51
HCFC1-202ENST00000369984 TFP02787 698 aa11.89□□□□□ -0.51
HCFC1-202ENST00000369984 SCNN1AP37088 669 aa11.89□□□□□ -0.51
HCFC1-202ENST00000369984 PTPRCAPQ14761 206 aa11.89□□□□□ -0.51
HCFC1-202ENST00000369984 DCUN1D4Q92564 292 aa11.89□□□□□ -0.51
HCFC1-202ENST00000369984 BCAS3Q9H6U6 928 aa11.89□□□□□ -0.51
HCFC1-202ENST00000369984 CCM2LQ9NUG4 571 aaPredicted RBP11.89□□□□□ -0.51
HCFC1-202ENST00000369984 DMAC2Q9NW81 257 aa11.89□□□□□ -0.51
HCFC1-202ENST00000369984 NUPL2O15504 423 aaKnown RBP11.89□□□□□ -0.51
HCFC1-202ENST00000369984 SCO2O43819 266 aa11.89□□□□□ -0.51
HCFC1-202ENST00000369984 CD53P19397 219 aa11.89□□□□□ -0.51
HCFC1-202ENST00000369984 PYCR1P32322 319 aa11.89□□□□□ -0.51
HCFC1-202ENST00000369984 NCS1P62166 190 aa11.89□□□□□ -0.51
HCFC1-202ENST00000369984 RPP30P78346 268 aaKnown RBP11.89□□□□□ -0.51
HCFC1-202ENST00000369984 NAA11Q9BSU3 229 aaPredicted RBP11.89□□□□□ -0.51
HCFC1-202ENST00000369984 SLA2Q9H6Q3 261 aa11.89□□□□□ -0.51
HCFC1-202ENST00000369984 LRRTM2O43300 516 aa11.89□□□□□ -0.51
HCFC1-202ENST00000369984 CHRNB1P11230 501 aa11.89□□□□□ -0.51
HCFC1-202ENST00000369984 PORP16435 677 aaPredicted RBP11.89□□□□□ -0.51
HCFC1-202ENST00000369984 C10orf62Q5T681 223 aaPredicted RBP11.89□□□□□ -0.51
HCFC1-202ENST00000369984 TTLL10Q6ZVT0 673 aa11.89□□□□□ -0.51
HCFC1-202ENST00000369984 ZFP41Q8N8Y5 198 aa11.89□□□□□ -0.51
HCFC1-202ENST00000369984 OR5P2Q8WZ92 322 aa11.89□□□□□ -0.51
HCFC1-202ENST00000369984 FAM46BQ96A09 425 aa11.89□□□□□ -0.51
HCFC1-202ENST00000369984 MYEF2Q9P2K5 600 aaKnown RBP11.89□□□□□ -0.51
HCFC1-202ENST00000369984 KCTD3Q9Y597 815 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms