RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 M0R3H8 397 aa15.14■□□□□ 0.01
COL17A1-202ENST00000369733 EIF3FO00303 357 aaPredicted RBP15.14■□□□□ 0.01
COL17A1-202ENST00000369733 INPPL1O15357 1258 aa15.14■□□□□ 0.01
COL17A1-202ENST00000369733 GSRP00390 522 aa15.14■□□□□ 0.01
COL17A1-202ENST00000369733 EIF1AXP47813 144 aaKnown RBP15.14■□□□□ 0.01
COL17A1-202ENST00000369733 OR2L8Q8NGY9 312 aa15.14■□□□□ 0.01
COL17A1-202ENST00000369733 S100PBPQ96BU1 408 aa15.14■□□□□ 0.01
COL17A1-202ENST00000369733 FZD9O00144 591 aa15.14■□□□□ 0.01
COL17A1-202ENST00000369733 GRPRP30550 384 aa15.14■□□□□ 0.01
COL17A1-202ENST00000369733 FRKP42685 505 aaPredicted RBP15.14■□□□□ 0.01
COL17A1-202ENST00000369733 OCLNQ16625 522 aa15.14■□□□□ 0.01
COL17A1-202ENST00000369733 METTL11BQ5VVY1 283 aa15.14■□□□□ 0.01
COL17A1-202ENST00000369733 METTL2BQ6P1Q9 378 aaKnown RBP15.14■□□□□ 0.01
COL17A1-202ENST00000369733 SCD5Q86SK9 330 aa15.14■□□□□ 0.01
COL17A1-202ENST00000369733 SETD7Q8WTS6 366 aaKnown RBP15.14■□□□□ 0.01
COL17A1-202ENST00000369733 ZNF689Q96CS4 500 aaPredicted RBP15.14■□□□□ 0.01
COL17A1-202ENST00000369733 ZNF583Q96ND8 569 aa15.14■□□□□ 0.01
COL17A1-202ENST00000369733 SLC6A7Q99884 636 aa15.14■□□□□ 0.01
COL17A1-202ENST00000369733 ACTL8Q9H568 366 aa15.14■□□□□ 0.01
COL17A1-202ENST00000369733 ERVK-19Q9WJR5 959 aa15.14■□□□□ 0.01
COL17A1-202ENST00000369733 SLC45A1Q9Y2W3 748 aa15.14■□□□□ 0.01
COL17A1-202ENST00000369733 WNT6Q9Y6F9 365 aa15.14■□□□□ 0.01
COL17A1-202ENST00000369733 NPIPA5E9PKD4 350 aa15.14■□□□□ 0.01
COL17A1-202ENST00000369733 HCKP08631 526 aa15.14■□□□□ 0.01
COL17A1-202ENST00000369733 ADORA3P0DMS8 318 aa15.14■□□□□ 0.01
COL17A1-202ENST00000369733 KCNC1P48547 511 aa15.14■□□□□ 0.01
COL17A1-202ENST00000369733 PRKCZQ05513 592 aa15.14■□□□□ 0.01
COL17A1-202ENST00000369733 ELP2Q6IA86 826 aa15.14■□□□□ 0.01
COL17A1-202ENST00000369733 OTOP2Q7RTS6 562 aa15.14■□□□□ 0.01
COL17A1-202ENST00000369733 TMEM40Q8WWA1 233 aa15.14■□□□□ 0.01
COL17A1-202ENST00000369733 CNOT9Q92600 299 aaKnown RBP15.14■□□□□ 0.01
COL17A1-202ENST00000369733 NPIPA1Q9UND3 350 aa15.14■□□□□ 0.01
COL17A1-202ENST00000369733 C1orf226A1L170 272 aa15.14■□□□□ 0.01
COL17A1-202ENST00000369733 OR6C74A6NCV1 312 aa15.14■□□□□ 0.01
COL17A1-202ENST00000369733 PAK4O96013 591 aaPredicted RBP15.14■□□□□ 0.01
COL17A1-202ENST00000369733 ALDOBP05062 364 aa15.14■□□□□ 0.01
COL17A1-202ENST00000369733 DRD2P14416 443 aa15.14■□□□□ 0.01
COL17A1-202ENST00000369733 EIF2DP41214 584 aaKnown RBP15.14■□□□□ 0.01
COL17A1-202ENST00000369733 GK2Q14410 553 aaPredicted RBP15.14■□□□□ 0.01
COL17A1-202ENST00000369733 DECR1Q16698 335 aa15.14■□□□□ 0.01
COL17A1-202ENST00000369733 PKDCCQ504Y2 493 aa15.14■□□□□ 0.01
COL17A1-202ENST00000369733 ZNF550Q7Z398 422 aa15.14■□□□□ 0.01
COL17A1-202ENST00000369733 CADM3Q8N126 398 aa15.14■□□□□ 0.01
COL17A1-202ENST00000369733 DNAJC22Q8N4W6 341 aa15.14■□□□□ 0.01
COL17A1-202ENST00000369733 ALG8Q9BVK2 526 aa15.14■□□□□ 0.01
COL17A1-202ENST00000369733 BRF2Q9HAW0 419 aa15.14■□□□□ 0.01
COL17A1-202ENST00000369733 IL17CQ9P0M4 197 aa15.14■□□□□ 0.01
COL17A1-202ENST00000369733 CCKBRP32239 447 aa15.13■□□□□ 0.01
COL17A1-202ENST00000369733 ZNF805Q5CZA5 627 aa15.13■□□□□ 0.01
COL17A1-202ENST00000369733 HES5Q5TA89 166 aa15.13■□□□□ 0.01
COL17A1-202ENST00000369733 ARHGAP11AQ6P4F7 1023 aa15.13■□□□□ 0.01
COL17A1-202ENST00000369733 DGLUCYQ7Z3D6 616 aa15.13■□□□□ 0.01
COL17A1-202ENST00000369733 LRRTM3Q86VH5 581 aa15.13■□□□□ 0.01
COL17A1-202ENST00000369733 ISL2Q96A47 359 aa15.13■□□□□ 0.01
COL17A1-202ENST00000369733 ZNF840PA6NDX5 716 aa15.13■□□□□ 0.01
COL17A1-202ENST00000369733 MEIS3P2A8K0S8 358 aa15.13■□□□□ 0.01
COL17A1-202ENST00000369733 UBFD1O14562 309 aaKnown RBP15.13■□□□□ 0.01
COL17A1-202ENST00000369733 KHNYNO15037 678 aaKnown RBP15.13■□□□□ 0.01
COL17A1-202ENST00000369733 UGDHO60701 494 aa15.13■□□□□ 0.01
COL17A1-202ENST00000369733 IL1AP01583 271 aa15.13■□□□□ 0.01
COL17A1-202ENST00000369733 ASGR2P07307 311 aa15.13■□□□□ 0.01
COL17A1-202ENST00000369733 SLC6A9P48067 706 aa15.13■□□□□ 0.01
COL17A1-202ENST00000369733 MASP1P48740 699 aa15.13■□□□□ 0.01
COL17A1-202ENST00000369733 TAS2R38P59533 333 aa15.13■□□□□ 0.01
COL17A1-202ENST00000369733 TCEAL6Q6IPX3 200 aa15.13■□□□□ 0.01
COL17A1-202ENST00000369733 UNC5DQ6UXZ4 953 aa15.13■□□□□ 0.01
COL17A1-202ENST00000369733 PTRH1Q86Y79 214 aaKnown RBP15.13■□□□□ 0.01
COL17A1-202ENST00000369733 SNIP1Q8TAD8 396 aaKnown RBP15.13■□□□□ 0.01
COL17A1-202ENST00000369733 RDH14Q9HBH5 336 aa15.13■□□□□ 0.01
COL17A1-202ENST00000369733 CNIH4Q9P003 139 aa15.13■□□□□ 0.01
COL17A1-202ENST00000369733 GABRA3P34903 492 aa15.13■□□□□ 0.01
COL17A1-202ENST00000369733 CDKN2CP42773 168 aa15.13■□□□□ 0.01
COL17A1-202ENST00000369733 RGS19P49795 217 aa15.13■□□□□ 0.01
COL17A1-202ENST00000369733 GATMP50440 423 aa15.13■□□□□ 0.01
COL17A1-202ENST00000369733 ADARB1P78563 741 aaKnown RBP15.13■□□□□ 0.01
COL17A1-202ENST00000369733 CDNFQ49AH0 187 aa15.13■□□□□ 0.01
COL17A1-202ENST00000369733 LYSMD2Q8IV50 215 aa15.13■□□□□ 0.01
COL17A1-202ENST00000369733 SPRYD4Q8WW59 207 aaPredicted RBP15.13■□□□□ 0.01
COL17A1-202ENST00000369733 ORAI3Q9BRQ5 295 aa15.13■□□□□ 0.01
COL17A1-202ENST00000369733 SEC61A2Q9H9S3 476 aa15.13■□□□□ 0.01
COL17A1-202ENST00000369733 IL26Q9NPH9 171 aa15.13■□□□□ 0.01
COL17A1-202ENST00000369733 TDP1Q9NUW8 608 aa15.13■□□□□ 0.01
COL17A1-202ENST00000369733 FBXL21Q9UKT6 434 aa15.13■□□□□ 0.01
COL17A1-202ENST00000369733 UGT2A1Q9Y4X1 527 aa15.13■□□□□ 0.01
COL17A1-202ENST00000369733 ARPC4-TTLL3A0A0A6YYG9 625 aa15.13■□□□□ 0.01
COL17A1-202ENST00000369733 ITGA5P08648 1049 aa15.13■□□□□ 0.01
COL17A1-202ENST00000369733 RAB40BQ12829 278 aa15.13■□□□□ 0.01
COL17A1-202ENST00000369733 MLLT11Q13015 90 aaPredicted RBP15.13■□□□□ 0.01
COL17A1-202ENST00000369733 ADPRMQ3LIE5 342 aa15.13■□□□□ 0.01
COL17A1-202ENST00000369733 FUNDC1Q8IVP5 155 aa15.13■□□□□ 0.01
COL17A1-202ENST00000369733 LNX2Q8N448 690 aa15.13■□□□□ 0.01
COL17A1-202ENST00000369733 OR2T11Q8NH01 316 aa15.13■□□□□ 0.01
COL17A1-202ENST00000369733 ADAMTS16Q8TE57 1224 aa15.13■□□□□ 0.01
COL17A1-202ENST00000369733 TESCQ96BS2 214 aa15.13■□□□□ 0.01
COL17A1-202ENST00000369733 SLC38A3Q99624 504 aa15.13■□□□□ 0.01
COL17A1-202ENST00000369733 SIAEQ9HAT2 523 aa15.13■□□□□ 0.01
COL17A1-202ENST00000369733 VNN3Q9NY84 501 aa15.13■□□□□ 0.01
COL17A1-202ENST00000369733 WASH4PA8MWX3 477 aa15.13■□□□□ 0.01
COL17A1-202ENST00000369733 SPDEFO95238 335 aa15.13■□□□□ 0.01
COL17A1-202ENST00000369733 MAS1P04201 325 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms