RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 DCKP27707 260 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 PBX2P40425 430 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 TPMTP51580 245 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 GPR143P51810 404 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 RAPSNQ13702 412 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 MLF2Q15773 248 aaPredicted RBP5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 PYDC2Q56P42 97 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 DDI2Q5TDH0 399 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 AGBL4Q5VU57 503 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 TMEM215Q68D42 235 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 Q6ZNX1 250 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 NUP54Q7Z3B4 507 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 SYNPOQ8N3V7 929 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 ABHD11Q8NFV4 315 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 OR9A2Q8NGT5 310 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 TM4SF18Q96CE8 201 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 BTBD2Q9BX70 525 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 NPLQ9BXD5 320 aaPredicted RBP5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 OR8D2Q9GZM6 311 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 TMEM168Q9H0V1 697 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 MARCH7Q9H992 704 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 WASH6PQ9NQA3 447 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 POLE4Q9NR33 117 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 SDHAF3Q9NRP4 125 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 DNAJC27Q9NZQ0 273 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 ERVK-18Q9QC07 812 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 PADI2Q9Y2J8 665 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 ZNF646O15015 1829 aaPredicted RBP5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 A0A1B0GTL3 188 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 A0A1B0GTW7 788 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 TRAPPC13A5PLN9 417 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 A8MUA0 341 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 CCRL2O00421 344 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 GAPDHSO14556 408 aaPredicted RBP5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 AXIN1O15169 862 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 ACOX3O15254 700 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 MITFO75030 526 aaPredicted RBP5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 TNFRSF21O75509 655 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 CSTAP01040 98 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 MT-ND2P03891 347 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 HLA-DPB1P04440 258 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 GSTT2P0CG29 244 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 GSTT2BP0CG30 244 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 HK1P19367 917 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 FUT4P22083 530 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 FBLP22087 321 aaKnown RBP5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 STAT5AP42229 794 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 HNRNPFP52597 415 aaKnown RBP5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 GBX2P52951 348 aaPredicted RBP5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 ARFIP1P53367 373 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 TAS2R43P59537 309 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 PIGFQ07326 219 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 IHHQ14623 411 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 TOMM20Q15388 145 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 NHSL2Q5HYW2 709 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 SLC30A6Q6NXT4 461 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 TUBA3EQ6PEY2 450 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 FAM131AQ6UXB0 335 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 MCATQ8IVS2 390 aaKnown RBP5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 OR4N5Q8IXE1 308 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 Q8N9G6 341 aaPredicted RBP5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 PSD4Q8NDX1 1056 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 PHOSPHO1Q8TCT1 267 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 ZNF675Q8TD23 568 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 HLA-CQ95604 372 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 VMP1Q96GC9 406 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 PRRC1Q96M27 445 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 HHIPQ96QV1 700 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 ANKRA2Q9H9E1 313 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 NMNAT1Q9HAN9 279 aaPredicted RBP5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 FGF22Q9HCT0 170 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 IKZF2Q9UKS7 526 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 BAIAP2Q9UQB8 552 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 MIA3Q5JRA6 1907 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 CLCA1A8K7I4 914 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 A8MU76 341 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 PLPP1O14494 284 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 KLHL18O94889 574 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 GPR75O95800 540 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 AIFM1O95831 613 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 TACSTD2P09758 323 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 PRKAR1AP10644 381 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 FOSL2P15408 326 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 UGT2B7P16662 529 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 ZNF24P17028 368 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 NDUFV2P19404 249 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 GGT2P36268 569 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 CXCL12P48061 93 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 MASP1P48740 699 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 CCR5P51681 352 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 TNFRSF17Q02223 184 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 APOFQ13790 326 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 PON3Q15166 354 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 TSTQ16762 297 aaKnown RBP5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 ABHD17CQ6PCB6 329 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 POMZP3Q6PJE2 187 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 HSDL2Q6YN16 418 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 RNF111Q6ZNA4 994 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 FGD2Q7Z6J4 655 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms